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EMBL’s European Bioinformatics Institute (EMBL-EBI) manages the world’s most comprehensive suite of open data resources for the life sciences. Millions of scientists worldwide rely on these data resources. The breadth of usage has been expanding year on year, as researchers generate increasing…
2025
announcements
Case study shows the economic value and impact of UniProt, showing estimated annual gains of up to €5,475 per user.
2025
announcements
EMBL-EBI user survey opens - please complete it before 16 July
2025
announcements
Parkinson's disease, a neurodegenerative condition causing motor and non-motor symptoms like gut issues (often appearing decades early), is being investigated for its link to the gut microbiome. While previous studies have shown gut microbiome changes in Parkinson's patients, a clear consensus on…
SCIENCE & TECHNOLOGY2025
sciencescience-technology
A new EMBL-EBI platform reduces bioinformatics barriers to applying polygenic scores in disease risk research.
2025
updates-from-data-resources
Two weeks ago, EMBL-EBI identified and successfully disrupted the early stages of an attempt to compromise our internal IT systems. As a precautionary measure, our technical teams acted swiftly and temporarily shut down segments of our internal operational systems to ensure the security of…
2025
announcements
SAVANA is a new tool designed for accurate detection of structural variations in clinical samples.
SCIENCE & TECHNOLOGY2025
research-highlightsscience-technology
Reactome open data resource for biological pathways gets seal of approval.
2025
updates-from-data-resources
The Open Parser for Systematic IUPAC Nomenclature (OPSIN) allows users to convert chemical names into structures and machine-readable formats.
2025
updates-from-data-resources
Ensembl 114 introduces the updated MANE set v1.4 for GRCh38, many new and updated genomes, and more.
2025
updates-from-data-resources
DECIPHER v11.31 introduces new data visualisations for Human Developmental Cell Atlas expression, cancer case frequency data, and curated ear disorder information.
2025
updates-from-data-resources
The SureChEMBL 2.0 release includes expanded global patent coverage, a rebuilt annotation pipeline, a new unified bulk-download format, and more to come.
2025
updates-from-data-resources
Mary Barlow shares her insights on change management and her new role as Head of Major Initiatives at EMBL-EBI.
PEOPLE & PERSPECTIVES2025
people-perspectivesperspectives
EMBL-EBI’s new Chemical Biology Resources Team Leader aims to encourage community engagement and explore AI-driven approaches.
PEOPLE & PERSPECTIVES2025
people-perspectivesperspectives
InterPro 105.0 is now live. This AI-driven update makes it easier than ever to explore the protein universe.
2025
updates-from-data-resources
The new GA4GH refget Sequence Collections helps streamline reference genome management.
2025
technology-and-innovation
The Data Hubs Portal is a new interface that enables users to setup and manage pre-release and/or public Data Hubs at the ENA.
2025
updates-from-data-resources
As a Network Engineer, Shrayans balances connectivity and network security to help everyone at EMBL-EBI access the technical infrastructure they need in a seamless way
2025
perspectives
DECIPHER v11.30 includes updates to the display of Gene2Phenotype data and the pathogenicity of ClinVar and DECIPHER variants on variant pages.
2025
updates-from-data-resources
EMBl-EBI’s new building enables the translation of the institute’s data management expertise into solutions for global challenges
LAB MATTERS2025
announcementslab-matters
Jo McEntyre will become Interim Director of EMBL-EBI as Ewan Birney takes up the role of EMBL Executive Director.
2025
announcements
The Federated European Genome-phenome Archive (FEGA) has expanded its network and continues to evolve by embracing emerging technologies.
SCIENCE & TECHNOLOGY2025
science-technologytechnology-and-innovation
New EMBL-EBI project explores the use of a concept developed in aerospace engineering to support rare disease research, diagnosis, and treatment.
PEOPLE & PERSPECTIVES2025
people-perspectivestechnology-and-innovation
The AlphaFold Protein Structure Database (AFDB) now integrates The Encyclopedia of Domains (TED), a resource designed to systematically identify and classify structural domains within AlphaFold-predicted protein structures. TED provides domain boundaries for 365 million domains across more than one…
2025
updates-from-data-resources
The Gene2Phenotype (G2P) website has a fresh new look and now supports more detailed gene-disease mechanism information.
2025
updates-from-data-resources
African scientists awarded the 2024 EMBL-UNESCO residencies share their experience in bioinformatics and virology, emphasising the power of connections and knowledge exchange.
CONNECTIONSPEOPLE & PERSPECTIVES2025
connectionspeople-perspectives
Francesco talks about his work in protein science, fascination for protein design, and how he's finding the EMBL International PhD programme.
PEOPLE & PERSPECTIVES2025
people-perspectivesperspectives
Deepti Gupta, Project Manager and Database Curator at EMBL-EBI, talks about her favourite protein PIEZO1. This is part of a series of stories about EMBL scientists and quirky, charming proteins that make them smile.
PEOPLE & PERSPECTIVES2025
people-perspectivesperspectives
Claire O'Donovan, biocurator and Metabolomics team leader at EMBL-EBI shares lessons from her career and life.
PEOPLE & PERSPECTIVES2025
people-perspectivesperspectives
The Solve-RD project standardises genomic and clinical data across Europe to support rare disease research.
EMBL ANNOUNCEMENTS2025
announcementsembl-announcements
Tim Cezard talks about the importance of genetic variation data and the move from biology to infrastructure
PEOPLE & PERSPECTIVES2025
people-perspectivesperspectives
Introducing an open-source large language model (LLM) framework designed for custom biomedical research.
SCIENCE & TECHNOLOGY2025
research-highlightsscience-technology
Study identifies a novel mechanism driving osteosarcoma and provides insights to help predict patient outcomes.
SCIENCE & TECHNOLOGY2025
research-highlightsscience-technology
Memorandum of Understanding between EMBL and ELLIS will drive AI in European life science research, training, and technology. The strategic partnership will promote interdisciplinary training and develop innovative projects that address pressing challenges in human and planetary health.
CONNECTIONS2025
connections
The v11.29 DECIPHER release is out now. Find out about the new features and improvements.
2025
updates-from-data-resources
Blog post by Eleni Tzampatzopoulou, EMBL-EBI Impact Manager In summer 2024, EMBL-EBI ran a user survey, inviting our community to let us know how they use the open data resources we jointly manage with our collaborators. With over 2,300 responses from 126 countries, we were delighted by the depth…
2024
announcements
EMBL-EBI's new Functional Genomics Team Leader will develop standards for new data types and integrate AI into workflows.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
The introduction of computational methods in biology opened up an entirely new world of insights and breakthroughs. Over the last several decades, EMBL has been at the forefront of discoveries and innovations that have not only propelled the field forward but also opened up access to bioinformatics…
SCIENCE & TECHNOLOGY2024
science-technology
The most comprehensive map of the developing human thymus sheds light on how immune responses are built and maintained during early life
2024
announcements
Tell us a little bit about yourself. I’m a chartered civil engineer and I’ve worked in different capacities in the building and construction space. I worked for a contractor, delivering large infrastructure projects, such as roads, tunnels, bridges all over the UK. I also worked as a…
2024
perspectives
The v11.28 DECIPHER release is out now. Find out about the new features and improvements.
2024
updates-from-data-resources
In the era of data-driven biology, integrating information from different resources is essential yet often challenging. The BioChemGraph project addresses this challenge by creating infrastructure that consolidates structural, functional, and biochemical annotations for small molecules and their…
2024
updates-from-data-resources
InterPro version 102.0 and InterProScan 5.70-102.0 are now available.
2024
updates-from-data-resources
Ensembl 113 brings major gene and regulatory feature annotation updates in Homo sapiens (human) and Mus musculus (mouse).
2024
updates-from-data-resources
Researchers uncover that DNA changes that cause cancer drug resistance can be grouped into four categories, and identify possible new therapeutic targets.
2024
announcements
Creators of AI system AlphaFold receive 2024 Nobel Prize for Chemistry.
SCIENCE & TECHNOLOGY2024
sciencescience-technology
EMBL-EBI’s microbiome data resource MGnify produces a valuable trove of protein sequence data through its ongoing analysis of microbiome derived data. Two new MGnify Proteins web resources make this dataset easily accessible and searchable, both for large queries across the entire database…
2024
updates-from-data-resources
EMBL-EBI and colleagues from other 11 institutes commit to pathogen data sharing project.
2024
announcements
Addition of data from more diverse populations to the Polygenic Score (PGS) Catalog and a new software tool for PGS calculation could help produce more equitable disease risk predictions.
SCIENCE & TECHNOLOGY2024
science-technologytechnology-and-innovation
New datasets The release has 381 single-cell RNA-Seq experiments, consisting of more than 13.5 million cells from 21 different species to explore in the Single Cell Expression Atlas (SCEA). The resource now includes an entirely new class of data – externally analysed data, marked with an…
2024
updates-from-data-resources
EMBL-EBI Postdoctoral researcher Iguaracy Pinheiro de Sousa is using bioinformatics to support the development of better organoids.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
EMBL-EBI data resources help advance biodiversity and climate change research by enabling scientists to study species interactions, evolutionary processes, ecosystem health, and more.
SCIENCE & TECHNOLOGY2024
science-technologytechnology-and-innovation
Traditional sequence search methods are fast and efficient but rely solely on comparing amino acid sequences. This approach can miss crucial insights because proteins with similar functions can have vastly different sequences. Although their sequences have diverged, these proteins often retain 3D…
2024
updates-from-data-resources
EMBL-EBI alumnus Alvis Brazma reflects on how mathematics and mountaineering have shaped his life and why keeping things simple in bioinformatics is key.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
EMBL-EBI’s new Head of Applications will use his expertise in cloud infrastructure and security to support the institute’s open data resources.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
Using machine learning to analyse the genetic factors behind early clinical trial termination, researchers find a link between genetic evidence and trial outcome.
SCIENCE & TECHNOLOGY2024
research-highlightsscience-technology
The v11.27 DECIPHER release is out now. Find out about the new features and improvements.
2024
updates-from-data-resources
ARISE fellow Melanie Schneider shares how she uncovered a new interest in research infrastructures and supporting discovery.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
Kim Gurwitz talks about her role as Scientific Training Lead at EMBL-EBI and how collaborative projects for bioinformatics training support researchers and service providers in making the most of publicly available data.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
The dynamic world of proteomics is shaping the future of personalised medicine, but some obstacles stand in the way
SCIENCE & TECHNOLOGY2024
perspectivesscience-technology
Ewan Birney reflects on his time at EMBL and the development of the organisation through a commitment to open data and nurturing scientific talent.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
The new Team Leader for Human Genomics at EMBL-EBI shares how curiosity and maths shaped her career and what it takes to be a community builder.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
Researchers explore genetic diversity found in ancient environmental DNA to help modern agricultural practices.
EMBL ANNOUNCEMENTS2024
announcementsembl-announcements
IntAct 247 release is now public with over 1.5 million binary interaction evidences
2024
updates-from-data-resources
EMBL-EBI data resource helps scientists upcycle animal by-products.
SCIENCE & TECHNOLOGY2024
perspectivesscience-technology
A behind-the-scenes look at EMBL-EBI's in-house archive that supports major open data resources and ingests record amounts of data
2024
technology-and-innovation
The latest DECIPHER release includes AlphaMissense scores, links to the Open Targets Platform and more.
2024
updates-from-data-resources
Large-scale study uses data from Danish health registries to predict individual risks of developing cancer
SCIENCE & TECHNOLOGY2024
research-highlightsscience-technology
The integration enables researchers to easily access AI-generated scores estimating how likely genetic variants are to be pathogenic
2024
technology-and-innovation
EMBL-EBI asks users to fill in a services survey to help shape the future of the open data resources managed by the institute
2024
announcements
The latest Expression Atlas 40 release is now live, containing new RNA-seq datasets, including a featured experiment resulting from a collaboration with Genotype Tissue Expression (GTEx) project as well as new proteomics data derived from our collaboration with PRIDE. In total, this release…
2024
updates-from-data-resources
EMBL-EBI's new Head of Research shares his plans and priorities.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
Ensembl 112 and the corresponding release of Ensembl Genomes 59 has released. This includes exciting new fish species, many more drosophila species and new VEP updates.
2024
updates-from-data-resources
María Cerezo talks about her role as Scientific Curator, how she combines it with her position as co-chair of the Staff Association, and what she believes has been EMBL's biggest achievement in its first 50 years.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectives
EMBL-EBI's Senior Management Team announces new appointment and title changes.
2024
announcements
MSD joins as the latest partner in the Open Targets consortium, enhancing the initiative’s collaborative efforts in drug discovery.
EMBL ANNOUNCEMENTS2024
announcementsembl-announcements
Experts in quantum computing and genomics to develop new methods and algorithms to process biological data.
SCIENCE & TECHNOLOGY2024
announcementsscience-technology
Data obtained through cryogenic sample electron tomography (cryo-ET) are openly available in the new Electron Microscopy Public Image Archive (EMPIAR) cryo-ET tomography browser.
EMBL ANNOUNCEMENTS2024
announcementsembl-announcements
A recent EMBO | EMBL conference provided a forum for researchers to share how AI is making a difference in biology and bioinformatics.
SCIENCE & TECHNOLOGY2024
science-technology
The latest DECIPHER update, version 11.25, introduces new key features including the integration of functional data from multiplexed assays of variant effect (MAVEs) and much more.
2024
updates-from-data-resources
New study uncovers the potential of immunotherapy in preventing breast cancer and creates the openly available Human Breast Cell Atlas.
SCIENCE & TECHNOLOGY2024
research-highlightssciencescience-technology
The SARS-CoV-2 Data Hubs are a set of tools coupled with infrastructure that support four components: the submission, analysis, presentation and visualisation of SARS-CoV-2 raw read data, and its resulting analyses. What makes Data Hubs attractive is a unique set of features: A new publication in…
2024
updates-from-data-resources
Data standards that have been silently enabling discovery in the life sciences for decades are now making AI advances possible.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectivesscience
AI annotations added to the SureChEMBL database increase the depth of data made available to users.
2024
sciencetechnology-and-innovation
Team Leader Sameer Velankar on why accessible training is key for AlphaFold and AI tools more generally.
PEOPLE & PERSPECTIVES2024
people-perspectivesperspectivesscience
The MGnify data resource for microbiome data has launched the latest MGnify Genomes catalogue comprising 112,951 genomes derived from mouse gut datasets, represented by 2,847 species-level cluster representative genomes. This catalogue was generated as part of our work with the MRC funded…
2024
updates-from-data-resources
Plasmodium falciparum, a malaria parasite, uses gene conversion to produce genetic diversity in two surface protein genes targeted by the human immune system.
SCIENCE & TECHNOLOGY2024
announcementssciencescience-technology
An international team of researchers aim to combine social determinants of health with genomics, immune profiling, and exposomics data to tackle cancer inequities at an unprecedented scale.
SCIENCE & TECHNOLOGY2024
announcementssciencescience-technology
The Federated European Genome-phenome Archive (FEGA) marks a significant milestone with the release of its first datasets.
2024
announcements
Version 11.24 of DECIPHER introduces a new ACMG/AMP pathogenicity interface for sequence variant predictions, displays ClinGen Variant Curation Expert Panel recommendations on gene pages, and updates ACMG secondary finding information to v3.2.
2024
updates-from-data-resources
Jacqueline shares her experience of EMBL's international PhD programme.
LAB MATTERSPEOPLE & PERSPECTIVES2024
lab-matterspeople-perspectives
New Europe PMC tools support preprint review discovery
2024
updates-from-data-resources
Renato Alves talks about his time at EMBL, the Bio-IT project, his wishes for EMBL in its anniversary year, and how a passion for night hikes and stargazing led to the creation of EMBL’s astronomy club.
LAB MATTERSPEOPLE & PERSPECTIVES2024
lab-matterspeople-perspectives
InterPro version 98.0 and InterProScan 5.66-98.0 are now available. InterPro now features hundreds of new methods integrated from partner databases, and InterProScan draws on over 40000 entries. InterPro version 98.0 New features include: InterPro 98.0 covers 81.7% of UniProt Knowledgebase release…
2024
updates-from-data-resources
Kyle Morris joins EMBL-EBI as Electron Microscopy Data Bank (EMDB) Team Leader.
LAB MATTERSPEOPLE & PERSPECTIVES2024
lab-matterspeople-perspectives
Streamlining proteomics data access for machine learning applications.
2024
sciencetechnology-and-innovation
The Ensembl 111 features a range of new Ensembl VEP plugins and updated agricultural, fish, plant and metazoa species.
2024
updates-from-data-resources
A $3.8 million grant from the Gordon and Betty Moore Foundation will help researchers lay groundwork for the Biodiversity Cell Atlas.
2024
announcements
Researchers reveal that healthy lung development hinges on immune-epithelial crosstalk, with implications for respiratory diseases.
SCIENCE & TECHNOLOGY2023
research-highlightsscience-technology
UK Research and Innovation (UKRI) has confirmed £80.7 million of funding for EMBL’s European Bioinformatics Institute (EMBL-EBI). The funding comes from the UKRI Infrastructure Fund and will be distributed over the course of six years. It is set to help EMBL-EBI transform its technical…
2023
announcements
The new initiative brings together genomic data from various biodiversity projects to aid conservation and biodiversity efforts.
SCIENCE & TECHNOLOGY2023
announcementssciencescience-technology
Two new data portals are set to support infectious disease monitoring and research across Europe; the Swedish Pathogens Data Portal and the Netherlands COVID-19 Data Portal.
2023
updates-from-data-resources
Leading charities Children with Cancer UK and Cancer Research UK will co-fund a major £5.5 million research programme to advance precision medicine for relapsed childhood cancers.
2023
announcements
EMBL scientist Oliver Stegle explains how AI-based tools have the potential to transform our ability to better understand the complexity of life and how these tools will shape the future of life science exploration.
LAB MATTERSPEOPLE & PERSPECTIVES2023
lab-matterspeople-perspectives
Large language models are changing the way we carry out scientific data curation, annotation, and research, setting the stage for a more efficient understanding of scientific literature
2023
technology-and-innovation
Where to start when thinking about the sustainability of informatics projects
2023
perspectives
Large language models are changing the way we carry out scientific data curation, annotation, and research, setting the stage for a more efficient understanding of scientific literature
EMBLetc2023
InterPro version 97.0 and InterProScan 5.64-97.0 are now available. InterPro now features hundreds of new methods integrated from partner databases, and InterProScan draws on over 40000 entries.
2023
updates-from-data-resources
Users no longer need to download large datasets with the new galleries feature
2023
updates-from-data-resources
As science increasingly relies on big data and AI tools, the carbon footprint of computational work is on the rise
2023
perspectives
In response to user community demands, the AlphaFold Protein Structure database has introduced sequence-based search and cluster members.
2023
updates-from-data-resources
The Lees group develops a tool that can scale up bacterial genome annotation.
2023
research-highlights
InterPro version 96.0 and InterProScan 5.64-96.0 are now available.
2023
updates-from-data-resources
PhD student Valentina Lorenzi is using single-cell sequencing data to create a map of the developing human reproductive system.
LAB MATTERSPEOPLE & PERSPECTIVES2023
lab-matterspeople-perspectivesperspectives
Enzymes constitute a large fraction of genomes – 20% in humans – which makes them a very important part of life. Despite decades of studies and a rich literature dedicated to understanding the reaction mechanisms of enzymes, the rules of enzyme catalysis are still not fully clear. A new…
SCIENCE & TECHNOLOGY2023
science-technologytechnology-and-innovation
Ensembl Variant Effect Predictor integrates Google DeepMind’s new AlphaMissense Database for better predictions of genetic variant pathogenicity.
SCIENCE & TECHNOLOGY2023
science-technologytechnology-and-innovation
New research improves understanding of the molecular mechanisms behind why some cancers respond to immunotherapy and others don't.
SCIENCE & TECHNOLOGY2023
research-highlightssciencescience-technology
Researchers use the AlphaFold database and Foldseek Cluster algorithm to analyse millions of predicted protein structures and offer new insights into protein evolution.
SCIENCE & TECHNOLOGY2023
research-highlightssciencescience-technology
EMBL-EBI’s Deputy Head of Research Virginie Uhlmann delves into the institute’s unique research landscape and the essential qualities for effective leadership in this field
2023
perspectives
Experience in data management and coordination has enabled EMBL alumna Laura Clarke to pursue a career in AI development.
PEOPLE & PERSPECTIVES2023
people-perspectivesperspectivesscience
EMBL-EBI Senior Scientist Rob Finn explains why data coordination and sharing are fundamental for a sustainable blue economy.
PEOPLE & PERSPECTIVES2023
people-perspectivesperspectivesscience
SComatic enables researchers to link genotype to phenotype using only single-cell profiling data
SCIENCE & TECHNOLOGY2023
research-highlightssciencescience-technology
By upskilling researchers on bioinformatics skills and tools, EMBL alumna Emily Perry is helping to make genomic medicine more accessible.
LAB MATTERSPEOPLE & PERSPECTIVES2023
lab-matterspeople-perspectivesperspectives
Ensembl 110 and Ensembl Genomes 57 have introduced in-house prokaryotic gene annotation across genomes available in Ensembl Bacteria. Since its inception, Ensembl Bacteria has imported user-submitted annotations from the International Nucleotide Sequence Database Collaboration (INSDC) for…
2023
updates-from-data-resources
The latest Expression Atlas release is now live and contains a wider range of RNA-seq and proteomics datasets.
2023
updates-from-data-resources
The GA4GH standard refget quietly helps decipher millions of genomes sequenced worldwide, and it just got better.
2023
technology-and-innovation
Ensembl 100 release brings exciting updates, such as the addition of regulation data to 5 animal genomes studied extensively in agriculture.
2023
updates-from-data-resources
We are excited to announce the latest releases of IntAct and Complex Portal. IntAct 244 highlights Complex Portal 244 highlights
2023
updates-from-data-resources
Construction begins on EMBL-EBI's new building named after Janet Thornton.
EMBL ANNOUNCEMENTSLAB MATTERS2023
announcementsembl-announcementslab-matters
InterPro version 95.0 and InterProScan 5.63-95.0 are now available! InterPro now features hundreds of new methods integrated from partner databases, and InterProScan draws on over 39000 entries. InterPro version 95.0 – new features include: InterPro 95.0 covers 81.7% of UniProt Knowledgebase…
2023
updates-from-data-resources
Closer collaborations with EMBL-EBI data resources set to further develop and grow this unique rare disease platform.
EMBL ANNOUNCEMENTS2023
announcementsembl-announcementsscience
Enabling researchers worldwide to share and analyse pathogen data generated across the world
SCIENCE & TECHNOLOGY2023
sciencescience-technologytechnology-and-innovation
Coming from a pharmaceutical industry background, David Hulcoop is set to take over as Executive Director of the public-private partnership Open Targets.
EMBL ANNOUNCEMENTS2023
announcementsembl-announcements
Better search for Europe PMC funder grants with ROR IDs
2023
updates-from-data-resources
A third of all known proteins are either completely or partially unstructured. EMBL scientists contributed to a new set of guidelines – Minimum Information About a Disorder Experiment (MIADE) – that will help researchers share data on unstructured proteins in a more useful way and will enable…
SCIENCE & TECHNOLOGY2023
sciencescience-technology
New framework to improve the FAIRness of clinical and molecular datasets
2023
perspectives
HoloFood, the first consistent collection of multiomic data about chicken and salmon gut microbiomes, set to enable the development of better animal feeds.
SCIENCE & TECHNOLOGY2023
sciencescience-technologytechnology-and-innovation
The AlphaFold Database boasts improved user experience, including better search filters and an improved 3D viewer.
2023
updates-from-data-resources
EMBL-EBI data resources are being used to deliver thousands of genetic diagnostics to patients every month.
SCIENCE & TECHNOLOGY2023
perspectivessciencescience-technology
In recognition of Janet Thornton’s retirement, we look back at some of her biggest accomplishments shaping the field of bioinformatics.
LAB MATTERSPEOPLE & PERSPECTIVES2023
announcementslab-matterspeople-perspectives
A new tool for the interpretation of missense variation in humans – ProtVar – will help enable drug discovery.
SCIENCE & TECHNOLOGY2023
sciencescience-technologytechnology-and-innovation
The PLAST-CELL project aims to understanding cancer progression by quantifying a cancer cell’s ability to respond to environmental stress that threatens its survival
CONNECTIONS2023
connectionstechnology-and-innovation
Postdoctoral researcher Carolin Sauer is leveraging long-read sequencing to develop new detection methods for various cancers.
LAB MATTERSPEOPLE & PERSPECTIVES2023
lab-matterspeople-perspectivesresearch-highlights
InterPro 94.0 features hundreds of new methods integrated from partner databases, and InterProScan draws on over 38,000 entries.
2023
updates-from-data-resources
BioImage Archive Team Leader Matthew Hartley shares his experience and tips for people interested in managing a bioinformatics core facility.
2023
technology-and-innovation
In recognition of Janet Thornton’s retirement, we look back at some of her biggest accomplishments in shaping the field of bioinformatics.
EMBLetc2023
Desmond Higgins, 2023 Lennart Philipson Award winner, discusses his time at EMBL and his research developing sequence alignment tools.
EMBLetc2023
Understanding chromothripsis offers insights into how cancer develops.
SCIENCE & TECHNOLOGY2023
research-highlightsscience-technology
The human pangenome – one of the most complete collections of genome sequences released so far – captures rich human diversity.
SCIENCE & TECHNOLOGY2023
announcementssciencescience-technology
EMBL-EBI is making a key contribution to a historic effort to understand the function of every human gene
LAB MATTERSSCIENCE & TECHNOLOGY2023
announcementslab-mattersscience-technology
On the 20th anniversary of the Human Genome Project, we look back at its history, wonder and potential.
LAB MATTERSPEOPLE & PERSPECTIVES2023
lab-matterspeople-perspectivesperspectives
As a postdoc Alex Almeida used bioinformatics to push the boundaries of what we know about the gut microbiome. Here, Almeida explains how his time at EMBL-EBI generated new research avenues, and how the skills and connections from his postdoc prepared him for leading his own research group at the…
PEOPLE & PERSPECTIVES2023
people-perspectivesperspectives
WormBase ParaSite release 18 adds largest number of new genomes and annotations since launch, as well as full integration with AlphaFold.
SCIENCE & TECHNOLOGY2023
science-technologyupdates-from-data-resources
EMBL-EBI researchers have developed a new tool capable of performing state-of-the-art phylogenetic inference on larger datasets than previously thought possible.
SCIENCE & TECHNOLOGY2023
research-highlightssciencescience-technology
Darwin Tree of Life project improves bioinformatics tools for biodiversity data analysis
CONNECTIONS2023
connectionstechnology-and-innovation
The European Nucleotide Archive database introduces mandatory spatiotemporal metadata for data submissions.
2023
updates-from-data-resources
Two former EMBL scientists have been recognised for their outstanding contributions to the fields of science communication and multiple sequence alignment research, respectively.
2023
alumni
Using long-read sequencing and machine learning approaches, EMBL alumna Lara Urban is making a difference in the field of One Health.
2023
perspectives
EMBL-EBI's metagenomics data resource increases in size and supports groundbreaking AI tools for protein structure prediction.
2023
updates-from-data-resources
EMBL-EBI researchers use UK Biobank data to uncover new information about rare diseases of the eye.
2023
research-highlightsscience
InterPro now features hundreds of new methods integrated from partner databases, and InterProScan draws on over 38,000 entries. InterPro version 93.0 InterPro 93.0 integrates 300 new methods from the CDD (261), PANTHER (12), PROSITE profiles (17), SMART (9), TIGRFAMs (1) databases, and covers 81.7%…
2023
updates-from-data-resources
As major biodiversity projects ramp up, EMBL-EBI enables genomic data sharing for all species.
2023
perspectivesscience
The Single Cell Expression Atlas (SCEA) now includes more datasets and species.
2023
updates-from-data-resources
Why open data from model organisms is essential for rare disease research.
2023
perspectivesscience
The Open Global Data Citation Corpus will become a central place for research data citations, and include accession numbers supplied by Europe PMC.
2023
announcements
Researchers create a network of interacting proteins – or interactome – to aid drug discovery.
2023
research-highlightsscience
EMBL-EBI’s Software Development and Operations team is delighted to announce the launch of a brand-new Job Dispatcher website, currently in development. The updated website provides a landing page for the Job Dispatcher services, making it easier for users to find and navigate services…
2023
updates-from-data-resources
Jo McEntyre talks about data services, open data and a new era for research assessment.
LAB MATTERSPEOPLE & PERSPECTIVES2023
lab-matterspeople-perspectivesperspectives
EMBL is one of the partners of this project that aims to accelerate drug discovery and development, bringing in expertise from EMBL Grenoble and EMBL-EBI.
LAB MATTERSSCIENCE & TECHNOLOGY2023
lab-mattersscience-technology
EMBL-EBI congratulates Matt Hurles on being appointed as the new Director of the Wellcome Sanger Institute.
2023
announcements
Open data played a pivotal role in the development of the AlphaFold AI. The same open principles now apply to AlphaFold predictions.
2023
perspectivesscience
Latest Ensembl and Ensembl Genomes releases bring updates to donkey and horse assemblies, and lots of new plants and metazoa.
2023
updates-from-data-resources
Funding awarded for developing tools to harness marine microbiome data for biotechnological applications and ecosystem services.
2023
announcementsscience
Genomic sequencing and big data analysis are two novel technologies driving researchers’ understanding of the complexities of cancer.
2023
perspectivesscience
Aggregating clinical, genomic and functional data from patient-derived xenografts, organoids and cell lines
2023
updates-from-data-resources
Open Targets is using artificial intelligence and machine learning to identify and prioritise drug targets.
SCIENCE & TECHNOLOGY2023
sciencescience-technologytechnology-and-innovation
We look back through some of the 2022 highlights from the Darwin Tree of Life project.
SCIENCE & TECHNOLOGY2023
perspectivessciencescience-technology
Rob Finn, one of the co-chairs of the Microbial Ecosystems theme, discusses his work, the challenges of multidisciplinary research, and how the theme is already helping to promote the exchange of scientific ideas.
LAB MATTERSPEOPLE & PERSPECTIVES2023
lab-matterspeople-perspectives
InterPro version 92.0 and InterProScan 5.60-92.0 are now available. InterPro now features hundreds of new methods integrated from partner databases, and InterProScan draws on over 38000 entries.
2023
updates-from-data-resources
A new method developed by EMBL-EBI researchers helps to streamline nanopore sequencing in real-time.
SCIENCE & TECHNOLOGY2023
research-highlightssciencescience-technology
Open data resources that enable global research and development recognised by the Global Biodata Coalition.
2022
announcementsscience
Researchers have genetically profiled nearly 200,000 cells from lungs, mapping their precise locations in tissue to discover an unexpected new immune niche in our airways.
2022
research-highlights
The first cohort study linking data across categories was recently added on the Pathogens Portal Cohort Browser and is also accessible from the BioSamples browser. This pilot study comes from Erasmus Medical Centre through the ReCoDID project, one of the COVID-19 Data Platform supporting…
2022
updates-from-data-resources
Andy Cafferkey takes on strategic role to help the institute respond to increasing demands from the global life science community.
2022
announcements
Unveiling a useful tool for understanding human lung development.
2022
research-highlightsscience
EMBL-EBI supports new European Commission project set to support the use of genomics in research and healthcare.
2022
announcementsscience
An ambitious project to sequence the genomes of all known species of euglenoids will drive research on biofuels and sustainable foods.
2022
announcements
The CABANA project was born out of a desire to strengthen bioinformatics capacity and accelerate data-driven biology in Latin America.
EMBLetc2022
Open Targets announces that Genentech will become the seventh partner in the drug discovery and validation consortium.
2022
announcementsscience
Our experts discuss the importance of open science for food security and preserving global biodiversity.
2022
perspectivesscience
Researchers have created a tool that maps in previously unseen detail how breast cancer develops and spreads.
2022
research-highlightsscience
Researchers use social media to share findings on how useful AlphaFold predictions are for different applications.
2022
research-highlightsscience
Researchers across EMBL are helping to make artificial intelligence (AI) models for bioimaging analysis interoperable and openly available to the scientific community.
2022
announcementsscience
Virginie Uhlmann will support the Interim Head of Research in managing the institute's computational research groups.
2022
announcements
NIH BRAIN Initiative to fund brain atlases, network coordination, and knowledge sharing to explore brain function research.
2022
announcementsscience
You can now superpose AlphaFold models onto PDB structures at the touch of a button using the PDBe-KB aggregated views of proteins.
2022
updates-from-data-resources
We are pleased to announce the release of Ensembl 108, and the corresponding release of Ensembl Genomes 55 featuring changes in the human default tracks, new genomes in Ensembl Plants and Ensembl Metazoa, and the addition of mitochondrial annotation for Tasmanian devil. Genome assemblies and…
2022
updates-from-data-resources
We are pleased to announce the release of InterPro 91.0 and InterProScan 5.59-91.0
2022
updates-from-data-resources
Data continues to be available in BioStudies.
2022
updates-from-data-resources
Over 40 million protein annotations have been added to the UniProt database using a Google Research natural language processing model.
2022
technology-and-innovation
EMBL-EBI’s MGnify data resource helps researchers find enzymes for novel applications.
2022
announcementsscience
European experts gather to launch a project that aims to characterise and conserve life on Earth using DNA data.
2022
announcementsscience
The Royal Microscopical Society recognises Ardan Patwardhan’s contributions to the field of electron microscopy.
2022
announcements
Ewan Birney, Deputy Director General of EMBL and Director of EMBL-EBI, reveals the key factors that enabled AlphaFold to change the world of biology.
PEOPLE & PERSPECTIVES2022
people-perspectivesperspectivesscience
A new method for the robust analysis of copy number variation and used UK Biobank data to identify links between genome and disease.
SCIENCE & TECHNOLOGY2022
research-highlightssciencescience-technology
International consortium analyses the genetic sequences and antibiotic susceptibility of 10,000 global Mycobacterium tuberculosis isolates.
SCIENCE & TECHNOLOGY2022
research-highlightssciencescience-technology
InterPro version 90.0 and InterProScan 5.57-90.0 are now available. InterPro now features hundreds of new methods integrated from partner databases, and InterProScan draws on over 40000 entries
2022
updates-from-data-resources
Machine learning has helped researchers uncover new insights into how bacteria infect host cells.
SCIENCE & TECHNOLOGY2022
research-highlightssciencescience-technology
AlphaFold database offers a look at 3D protein universe.
SCIENCE & TECHNOLOGY2022
sciencescience-technologytechnology-and-innovation
The first meeting of the Latvian Bioinformatics Forum points towards an even brighter future for the country’s role in European life sciences
CONNECTIONS2022
connectionsevents
EMBL researchers now understand the function of an elusive small DNA in bacteria and have developed a tool that can be used to better understand what might ‘switch on’ bacterial immune defences.
SCIENCE & TECHNOLOGY2022
sciencescience-technology
Scientists identify previously unexplored gene segments to be added to human genome databases.
SCIENCE & TECHNOLOGY2022
research-highlightssciencescience-technology
A closer look at how genome sequencing is helping us protect biodiversity and our latest public engagement activities
2022
announcements
Funding set to support data resources for key areas of antimicrobial resistance, sustainable agriculture and biodiversity loss
2022
announcements
On 30 September 2022 the ArrayExpress interface will close. All datasets have now been migrated from ArrayExpress into the BioStudies ArrayExpress collection
2022
updates-from-data-resources
The African BioGenome Project and EMBL have signed a Memorandum of Understanding to support each other in building genomics and bioinformatics capacity across Africa
CONNECTIONSLAB MATTERS2022
announcementsconnectionslab-matters
Researchers discover how DNA mutations change blood cell production and how this relates to ageing and cancer development.
SCIENCE & TECHNOLOGY2022
research-highlightssciencescience-technology
Researchers in the Ensembl team are making the most of machine learning methods to speed up genome annotation pipelines
SCIENCE & TECHNOLOGY2022
sciencescience-technologytechnology-and-innovation
Fergal Martin discusses the importance of open access data and his work in different biodiversity initiatives
LAB MATTERSPEOPLE & PERSPECTIVES2022
lab-matterspeople-perspectives
Janet Thornton, the inaugural winner of the FEBS Journal Open Science Award, explains the importance and impact of open science.
LAB MATTERSPEOPLE & PERSPECTIVES2022
lab-matterspeople-perspectivesperspectives
How text mining collaborations benefit our research, data resources, and the wider scientific community.
SCIENCE & TECHNOLOGY2022
sciencescience-technologytechnology-and-innovation
2.4 billion protein sequences are now available in the latest MGnify release including new annotations provided by Google AI
2022
updates-from-data-resources
Peter Harrison discusses the importance of data accessibility and his passion for biodiversity and agricultural genomics.
LAB MATTERSPEOPLE & PERSPECTIVES2022
lab-matterspeople-perspectives
New dataset of predicted protein complexes accessible through 3D-Beacons Network.
2022
updates-from-data-resources
Virginie Uhlmann shares her tips for using deep learning for bioimage analysis in the life sciences.
SCIENCE & TECHNOLOGY2022
perspectivessciencescience-technology
The GBC is a coalition of life sciences and biomedical research funders that aims to optimise the funding and management of biodata resources worldwide. The organisation has two priority aims: to better coordinate and share approaches for efficient management and growth of the biodata…
2022
announcements
Researchers from the MANE collaboration bring you the most comprehensive human genome annotation dataset to date.
SCIENCE & TECHNOLOGY2022
research-highlightssciencescience-technology
John Lees joins EMBL-EBI as a Group Leader in Pathogen informatics and modelling.
LAB MATTERSPEOPLE & PERSPECTIVES2022
lab-matterspeople-perspectives
The latest Single Cell Expression Atlas (SCEA) release is here and features collaborations with DiscovAIR and the Fly Cell Atlas
2022
updates-from-data-resources
Zamin Iqbal and his team are working with researchers all over the globe to help put a stop to Tuberculosis
SCIENCE & TECHNOLOGY2022
perspectivessciencescience-technology
Our researchers highlight their contributions to the Darwin Tree of Life project and how new genome annotations helps to further biodiversity research
SCIENCE & TECHNOLOGY2022
announcementssciencescience-technology
The African BioGenome Project aims to safeguard biodiversity and build bioinformatics capacity across Africa
SCIENCE & TECHNOLOGY2022
perspectivessciencescience-technology
Deep learning models can improve protein annotations and has helped expand the Pfam database.
SCIENCE & TECHNOLOGY2022
perspectivessciencescience-technology
New Expression Atlas release features differential-proteomics and baseline-proteomics experiments in collaboration with the PRIDE team at EMBL-EBI. This also includes new baseline DIA proteomics experiments as well as new differential proteomics datasets. To improve reproducibility,…
2022
updates-from-data-resources
Scientists urge the adoption of a sensible international policy for digital sequence information.
SCIENCE & TECHNOLOGY2022
announcementssciencescience-technology
Open Targets, a consortium focused on drug target identification, prioritisation, and validation, announced today that Pfizer has joined as a partner.
CONNECTIONS2022
announcementsconnectionsscience
DeepMind visits EMBL Heidelberg to discuss current and future implications of Artificial Intelligence for life science research.
SCIENCE & TECHNOLOGY2022
sciencescience-technology
The systematic application of AI in life sciences as in the AlphaFold algorithm for predicting protein structures has been named '2021 Breakthrough of the Year' by Science magazine.
SCIENCE & TECHNOLOGY2021
sciencescience-technology
How genomics, open data, and multidisciplinary science can improve food security.
SCIENCE & TECHNOLOGY2021
sciencescience-technology
A vast, curated collection of bacterial genomes is now organised, searchable and open to the community.
SCIENCE & TECHNOLOGY2021
sciencescience-technology
Independent study reveals that EMBL-EBI open data resources are critical for the life sciences.
LAB MATTERSSCIENCE & TECHNOLOGY2021
lab-mattersscience-technology
International project uses biomolecular data to improve animal feed and make meat production more sustainable
SCIENCE & TECHNOLOGY2021
sciencescience-technology
The scientific response to COVID-19 relied on rapid data sharing to understand the biology, epidemiology, transmission, and evolution of the SARS-CoV-2 virus. To meet this need, EMBL-EBI built the European COVID-19 Data Platform in conjunction with the European Commission, the European Open…
2021
technology-and-innovation
Distinctions recognise Peer’s development and sharing of bioinformatics tools as well as his significant contributions to bioinformatics research, education, and services.
LAB MATTERSPEOPLE & PERSPECTIVES2021
lab-matterspeople-perspectives
EMBL scientists support research on malaria by providing freely available data resources and using innovative experimental approaches. Our Course and Conference Office facilitates the exchange of knowledge in the field by hosting the annual BioMalPar conference.
SCIENCE & TECHNOLOGY2021
sciencescience-technology
EMBL scientists, together with collaborators from Heidelberg University, have provided further evidence of the gut’s role in COVID-19.
SCIENCE & TECHNOLOGY2021
sciencescience-technology
Researchers have used a metagenomics approach to piece together the genomes of yeasts found in wild lichens.
SCIENCE & TECHNOLOGY2021
sciencescience-technology
The contribution of EMBL Group Leader and Senior Scientist Wolfgang Huber has been recognised by the International Society for Computational Biology
EMBL ANNOUNCEMENTSLAB MATTERS2021
embl-announcementslab-matters
Thousands of new protein structure models, prected using deep learning, now available to explore
SCIENCE & TECHNOLOGY2021
sciencescience-technology
Scientists identify more than 140 000 virus species in the human gut; more than half have never been seen before
SCIENCE & TECHNOLOGY2021
sciencescience-technology
Researchers at EMBL Heidelberg have identified sequences in human proteins that might be used by SARS-CoV-2 to infect cells. They have discovered that the virus might hijack certain cellular processes, and they discuss potentially relevant drugs for treating COVID-19.
SCIENCE & TECHNOLOGY2021
sciencescience-technology
A new lineage of coronavirus was first identified in the UK, but why is it spreading much more rapidly within the population?
SCIENCE & TECHNOLOGY2021
sciencescience-technology
Despite restrictions, 2020 has been a busy year for the Darwin Tree of Life Project. We take a look at some of this year’s achievements and highlights.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
How artificial intelligence can help us solve the mysteries of the protein universe
SCIENCE & TECHNOLOGY2020
sciencescience-technology
Bioinformaticians at EMBL-EBI and beyond are adapting computational tools to investigate coronavirus genomes and proteins.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
Microbiomes, plastics, and connectivity – AtlantECO aims to understand the fabric of the Atlantic Ocean.
CONNECTIONS2020
connectionsscience
Scientists from the Beltrao Group at EMBL-EBI and collaborators identified drug targets common to SARS-CoV-2, SARS-CoV-1, and MERS-CoV, three pathogenic coronaviruses. They also found potential drugs that could be repurposed as COVID-19 treatments, and against emerging coronavirus strains in the…
SCIENCE & TECHNOLOGY2020
sciencescience-technology
ARISE fellowships to offer first-ever comprehensive training for bioscience infrastructure operations
LAB MATTERS2020
lab-matters
The Gerstung Group at EMBL-EBI and collaborators have developed a statistical model that analyses genomic data to predict whether a patient has a high or low risk of developing oesophageal cancer.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
EMBL-EBI is one of the eight European institutes involved in the Humanoid Cell Atlas initiative, a new open-access platform that combines single-cell profiling and organoid technology
EMBL ANNOUNCEMENTSLAB MATTERS2020
embl-announcementslab-matters
An international team of scientists involving Ewan Birney's group has investigated the function of a complex mesh of muscle fibres that line the inner surface of the heart.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
The human genome harbours about 19 000 protein-coding genes, many of which still have no known function. As scientists unveil the secrets of our DNA, they come across novel genes that they need to refer to using a unique name. The Human Genome Organisation’s Gene Nomenclature Committee (HGNC) at…
SCIENCE & TECHNOLOGY2020
sciencescience-technology
Researchers have developed an artificial intelligence algorithm that uses computer vision to analyse tissue samples from cancer patients. The algorithm can distinguish between healthy and cancerous tissues, and can also identify patterns DNA and RNA changes in tumours.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
An international team of scientists has collated all known bacterial genomes from the human gut microbiome into a single large database. Their work will allow researchers to explore the links between bacterial genes and proteins, and their effects on human health.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
European collaboration receives funding to explore risks and impact of future infectious disease outbreaks.
LAB MATTERS2020
lab-matters
DNA damage caused by chemical mutagens is not repaired immediately and can create more genetic diversity in tumours.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
EMBL scientists will contribute to the new German COVID-19 OMICS Initiative to study the biological mechanisms contributing to coronavirus infections. EMBL group leaders Jan Korbel and Oliver Stegle, who is also affiliated with the DKFZ Heidelberg, will coordinate the set-up of IT infrastructures…
SCIENCE & TECHNOLOGY2020
sciencescience-technology
DNA mutations are caused by a combination of DNA damage and repair, shows study by EMBL-EBI and collaborators.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
In March 2020, planes were grounded, streets went quiet, and our lives changed forever. But while the world came to a halt, many scientists were ramping up their efforts to understand the new virus.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
The new collaborative space will help scientists, public health and healthcare professionals around the world to fight the coronavirus pandemic.
SCIENCE & TECHNOLOGY2020
sciencescience-technology
Scientists from EMBL present a tool for large-scale analysis of genomic data with cloud computing. Main advantages of the new tool, called Butler, are continuous system monitoring and its ability to self-heal in case of failure, allowing for 43% more efficient data processing than previous…
SCIENCE & TECHNOLOGY2020
sciencescience-technology
The software diffTF quantifies activity of transcription factors and predicts their mode of action
SCIENCE & TECHNOLOGY2019
sciencescience-technology
Resource has implications for disease research
SCIENCE & TECHNOLOGY2019
sciencescience-technology
Crick and EMBL PhDs talk science over coffee
PEOPLE & PERSPECTIVES2019
people-perspectivesscience
Children's rights stored in synthetic DNA
EMBL ANNOUNCEMENTS2019
embl-announcementsscience
On microbiomes, public engagement and not being boring
PEOPLE & PERSPECTIVES2019
eventspeople-perspectives
Funding awarded to EMBL-EBI for tuberculosis monitoring tool
SCIENCE & TECHNOLOGY2019
sciencescience-technology
Immunotherapy: the role of B cells
SCIENCE & TECHNOLOGY2019
sciencescience-technology
Exploring the cancer genomics labyrinth
PEOPLE & PERSPECTIVES2019
people-perspectivesscience
Understanding how ageing works at a molecular level
SCIENCE & TECHNOLOGY2019
sciencescience-technology
Schoolchildren get creative with 3D protein structures
EMBL ANNOUNCEMENTS2019
embl-announcementsscience
Setting up a kids coding club - where to start
LAB MATTERSPEOPLE & PERSPECTIVES2019
lab-matterspeople-perspectives
The BioImage Archive - EMBL-EBI's first dedicated imaging data resource
SCIENCE & TECHNOLOGY2019
sciencescience-technology
The increasing importance of code in the biological sciences
SCIENCE & TECHNOLOGY2019
sciencescience-technology
Using genomics to help endangered species
SCIENCE & TECHNOLOGY2019
sciencescience-technology
Building bonds between academia and industry
LAB MATTERS2019
lab-matters
PDBe-KB - new data resource for protein structure and function launches
LAB MATTERS2019
lab-matters
How organs form in a mouse embryo
SCIENCE & TECHNOLOGY2019
sciencescience-technology
Enhancing the world's bioinformatics infrastructure
LAB MATTERS2019
lab-matters
A collection of the most read articles from the EMBL news website in 2018
LAB MATTERS2019
lab-matters
EMBL-EBI industry case study: Biocatalysts
SCIENCE & TECHNOLOGY2018
sciencescience-technology
New algorithm will enhance understanding of relationship between genotype and environmental factors
SCIENCE & TECHNOLOGY2018
sciencescience-technology
Building bridges between scientists and software developers
LAB MATTERS2018
lab-matters
Pharmaceutical company Sanofi strengthens drug targets discovery collaboration Open Targets
CONNECTIONSLAB MATTERS2018
connectionslab-matters
Complex metabolomics analyses in the cloud
SCIENCE & TECHNOLOGY2018
sciencescience-technology
Europe PMC adds preprints to its search
SCIENCE & TECHNOLOGY2018
sciencescience-technology
Acute myloid leukaemia risk could be detected years before diagnosis
SCIENCE & TECHNOLOGY2018
sciencescience-technology
New computational method uses multi-omics analysis for personalised medicine
SCIENCE & TECHNOLOGY2018
sciencescience-technology
Of mice and gorillas: using mouse data for conservation
SCIENCE & TECHNOLOGY2018
sciencescience-technology
EMBL-EBI PhD student launches start-up focusing on epigenetics and wellbeing
LAB MATTERSPEOPLE & PERSPECTIVES2018
lab-matterspeople-perspectives
New partner strengthens drug discovery collaboration
CONNECTIONSLAB MATTERS2018
connectionslab-matters
What worms can tell us about cancer
SCIENCE & TECHNOLOGY2018
sciencescience-technology
Launch of the first free global online catalogue of PDX models
SCIENCE & TECHNOLOGY2018
sciencescience-technology
New EMBL-EBI Group Leader will make sense of bioimaging data
PEOPLE & PERSPECTIVES2018
people-perspectivesscience
What does a cell's location tell us?
SCIENCE & TECHNOLOGY2018
sciencescience-technology
Network of genes linked to development of diabetes
SCIENCE & TECHNOLOGY2018
sciencescience-technology
EMBL’s training programme launches its first e-learning courses: introductions to optogenetics and CLEM
EMBL ANNOUNCEMENTS2018
embl-announcementsevents
High resolution 3D protein structures in a giffy with PDBe
SCIENCE & TECHNOLOGY2017
sciencescience-technology
Takeda joins pioneering public-private drug discover collaboration Open Targets
LAB MATTERSPEOPLE & PERSPECTIVES2017
lab-matterspeople-perspectives
New BioModels infrastructure supports significantly more model formats and offers improved search
SCIENCE & TECHNOLOGY2017
sciencescience-technology
Insights into the reproduction of Plasmodium parasites in mosquitoes reveal rapid and broad activity
SCIENCE & TECHNOLOGY2017
sciencescience-technology
How open data is changing our pursuit of discovery
SCIENCE & TECHNOLOGY2017
sciencescience-technology
EMBL’s new group leader based in Hamburg aims to create models of infection cycles
PEOPLE & PERSPECTIVES2017
people-perspectivesscience
EMBL-EBI and collaborators engage schools in a large-scale genome decoding project
LAB MATTERS2017
eventslab-matters
International experts gather at EMBL-EBI to reflect on the future of bioinformatics training
LAB MATTERS2017
eventslab-matters
How patient-derived computational models can help researchers understand cancer
SCIENCE & TECHNOLOGY2017
sciencescience-technology
The Iqbal research group hopes to build a 'Google of bacteria' to help better interpret the genome
PEOPLE & PERSPECTIVES2017
people-perspectivesscience
EMBL-EBI supports bioinformatics training and capacity in Latin America
CONNECTIONSLAB MATTERS2017
connectionslab-matters
IMPC explains how much the sex of animals is misdirecting research results
SCIENCE & TECHNOLOGY2017
sciencescience-technology
EMBL-EBI and IMPC characterised over 3000 mouse genes, revealing new gene associations with disease
SCIENCE & TECHNOLOGY2017
sciencescience-technology
The Image Data Resource - prototype of the first open repository linking imaging and molecular data
SCIENCE & TECHNOLOGY2017
sciencescience-technology
Introducing one of the largest collections of high-quality human induced pluripotent stem cells
SCIENCE & TECHNOLOGY2017
sciencescience-technology
EMBL-EBI researchers identify mouse epigenetic clock that could help scientists understand ageing
SCIENCE & TECHNOLOGY2017
sciencescience-technology
Silke Schumacher explains how the new EMBL site in Barcelona came into being
LAB MATTERS2017
lab-matters
Researchers use single-cell sequencing to understand how cells age
SCIENCE & TECHNOLOGY2017
sciencescience-technology
Anna Tramontano, bioinformatics pioneer and EMBL alumna, has passed away
LAB MATTERSPEOPLE & PERSPECTIVES2017
lab-matterspeople-perspectives
Janet Thornton reflects on the contributions of EMBL alumna Anna Tramontano
LAB MATTERSPEOPLE & PERSPECTIVES2017
lab-matterspeople-perspectives
The research community mourns the passing of Anna Tramontano
PEOPLE & PERSPECTIVES2017
alumnipeople-perspectives
EMBL alumna Nicola Mulder reflects on her pan-African bioinformatics project and its impact
PEOPLE & PERSPECTIVES2017
alumnipeople-perspectives
EMBL scientists discovered that common mutations can change the shape of gene promoters
SCIENCE & TECHNOLOGY2017
sciencescience-technology
New mechanism revealed
SCIENCE & TECHNOLOGY2017
sciencescience-technology
Ewan Birney's nine "Structures of Christmas" celebrate 20 years of PDBe
LAB MATTERSSCIENCE & TECHNOLOGY2016
lab-mattersscience-technology
Open source bioinformatics method for finding metabolites makes experiments comparable across labs
SCIENCE & TECHNOLOGY2016
sciencescience-technology
Where design meets bioinformatics, new scientific perspectives abound.
SCIENCE & TECHNOLOGY2016
sciencescience-technology
Unexpected adventures at EMBL LearningLAB focused on biodiversity
LAB MATTERS2016
lab-matters
'The PDB plays a crucial role in structural biology research and development'
SCIENCE & TECHNOLOGY2016
sciencescience-technology
Scientific community manager, alumnus Aidan Budd, connects people with shared interests, values, goals
PEOPLE & PERSPECTIVES2016
alumnipeople-perspectives
Team leader investigates how the gut microbiome could relate to human diseases
SCIENCE & TECHNOLOGY2016
sciencescience-technology
German students visit EMBL-EBI on a tour to explore a new culture and different career paths
LAB MATTERS2016
lab-matters
“Like getting hold of a microscope for the first time”
SCIENCE & TECHNOLOGY2016
sciencescience-technology
Stool transplants: finding the right match important, EMBL study shows
SCIENCE & TECHNOLOGY2016
sciencescience-technology
Subtle genetic differences destine cells to placenta or animal, very early in embryo development
SCIENCE & TECHNOLOGY2016
sciencescience-technology
“It’s a bit like drawing a picture of an intricate object just by looking at its shadow on the wall."
SCIENCE & TECHNOLOGY2016
sciencescience-technology
Independent analysis of EMBL-EBI underscores the value and impact of open data in the life sciences
LAB MATTERS2016
lab-matters
Plankton network linked to ocean's biological carbon pump revealed
SCIENCE & TECHNOLOGY2016
sciencescience-technology
GOBLET initiative supports pan-African bioinformatics trainers in Cape Town.
CONNECTIONS2015
connectionsevents
Commonly used diabetes drug metformin impacts gut bacteria more than disease itself
SCIENCE & TECHNOLOGY2015
sciencescience-technology
Annual EMBL-EBI Open Day showcases bioinformatics services, training and career opportunities.
LAB MATTERS2015
eventslab-matters
Embryology, genomics and bioinformatics combine to identify factors regulating mammalian pluripotency.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
Enzyme Portal makes it easier to explore all enzyme-related data in EMBL-EBI’s public resources.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
Evaluation of MinION™ sequencer finds performance and reliability consistently good.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
1000 Genomes Project pushed technologies and knowledge forward to understand what is 'normal' human genetic variation
SCIENCE & TECHNOLOGY2015
sciencescience-technology
EMBL-Wellcome Genome Campus events collaboration showcases open, application-based science.
CONNECTIONS2015
connectionsevents
Insights from organisers of upcoming EMBO|EMBL Aquatic Microeukaryotes symposium.
CONNECTIONS2015
connectionsevents
Highlights from EMBL-EBI’s Training Programme: Open Day, revamped webpages, free webinar series.
EMBL ANNOUNCEMENTS2015
embl-announcementsevents
New computational method to study biological signalling networks in healthy and cancer cells.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
New group explores why patients with same cancer exhibit unique constellations of genetic mutations.
LAB MATTERSPEOPLE & PERSPECTIVES2015
lab-matterspeople-perspectives
Janet Thornton reflects on her time as Director of one of Europe’s fastest growing research institutes.
LAB MATTERSPEOPLE & PERSPECTIVES2015
lab-matterspeople-perspectives
Collaboration between scientists reveals collaboration between lipids.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
A mathematician who got ‘sucked in’ to biological problems, meet new team leader Theodore Alexandrov.
PEOPLE & PERSPECTIVES2015
people-perspectivesscience
Multidisciplinary research provides clues to new treatments for deadly form of leukaemia in children
SCIENCE & TECHNOLOGY2015
sciencescience-technology
How T-cells are trained on what not to kill
SCIENCE & TECHNOLOGY2015
sciencescience-technology
Jan Korbel and colleagues publish commentary on risks and rewards of genome cloud computing.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
Researchers at EMBL-EBI speed up complex GWAS analyses with new method and algorithm.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
CERN openlab enters a new phase, expanding to include EMBL-EBI and other public research organisations.
LAB MATTERS2015
lab-matters
HMMER – a fast, sensitive search tool – helps find sequence relationships deep in evolutionary time.
LAB MATTERS2015
lab-matters
ELIXIR receives major Horizon 2020 funding to ‘EXCELERATE' activities over the next four years.
LAB MATTERS2015
lab-matters
Tara Oceans results reveal climate change insights, and a treasure trove of novel species and genes.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
In their quest to make structural biology more accessible, PDBe launches a new website.
LAB MATTERS2015
lab-matters
Major EU funding for CORBEL, facilitating access to data and biological imaging facilities.
LAB MATTERS2015
lab-matters
GWAS Catalog, originally developed by the NHGRI in the US, moves to EMBL-EBI.
LAB MATTERS2015
lab-matters
Rolf Apweiler and Ewan Birney appointed Joint Directors of EMBL-EBI, as Janet Thornton steps down.
LAB MATTERS2015
lab-matters
A quick round-up of the latest EMBL-EBI service releases.
LAB MATTERS2015
lab-matters
Building and visualising protein-interaction networks is easier and more accurate thanks to IntAct.
LAB MATTERS2015
lab-matters
Tried and tested do's and don'ts of crowdsource writing.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
How repurposing non-coding elements in the genome gave rise to the great ‘mammalian radiation’.
SCIENCE & TECHNOLOGY2015
sciencescience-technology
New project aims to speed up detection and response to disease outbreaks using genome technology.
LAB MATTERS2015
lab-matters
EMBL-EBI supports relaunch of yourgenome.org, to bring genetics advances to a wider audience.
LAB MATTERS2015
lab-matters
Genome-based insights into evolution of malaria-carrying Anopheles mosquitoes.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
Largest collection of helminth genomic data ever assembled, in new open-access WormBase ParaSite.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
Whether it’s information or people, the art of connecting is key to new group leader Judith Zaugg
PEOPLE & PERSPECTIVES2014
people-perspectivesscience
'Big Data to Knowledge' project by UCLA, Scripps and EMBL-EBI to transform protein data to knowledge.
LAB MATTERS2014
lab-matters
New, open repository helps researchers share computational models of disease.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
European Variation Archive makes it easier to explore detailed information about genetic variation.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
How does EMBL-EBI run millions of jobs for its users while moving its two large data centres?
LAB MATTERS2014
lab-matters
Music, bubbles and DNA: a collaborative project brings artist and scientist together
LAB MATTERS2014
lab-matters
EMBL scientists regularly receive prestigious awards - meet the latest honourees
LAB MATTERS2014
lab-matters
Pathfinding – poetic and practical – was a common theme in blogs from the EMBL network.
LAB MATTERS2014
lab-matters
Pooling programming and problem-solving expertise in bioinformatics at EMBL-EBI.
CONNECTIONS2014
connectionsevents
EMBL-EBI hosts successful first EMBO Practical Course in Genotype to Phenotype Mapping.
SCIENCE & TECHNOLOGY2014
eventsscience-technology
Researchers produce pristine stem cells, which can be precisely changed into clinically relevant cell types.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
Gibbon genome gives insights into evolution of this singing, swinging, tree-dwelling ape.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
RNAcentral is the first unified resource for all types of non-coding RNA data.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
Bronwen Aken discusses what research into the rabbit genome reveals about animal domestication.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
Ensembl has incorporated a vast amount of knowledge into a fully annotated reference human genome
SCIENCE & TECHNOLOGY2014
sciencescience-technology
EMBL-EBI’s anniversary celebration: blue skies thinking, Robin Ince and a biology-themed cake
LAB MATTERS2014
alumnilab-matters
School ambassadors show next generation that scientists are more ‘role model’ than ‘mad professor’
LAB MATTERS2014
lab-matters
EMBL scientists regularly receive prestigious awards - meet the latest honourees
LAB MATTERS2014
lab-matters
New ways of handling and distributing data at PDBe to tackle ever larger and more complex proteins
SCIENCE & TECHNOLOGY2014
sciencescience-technology
Data from first ever worldwide Ocean Sampling Day will be shared via EMBL-EBI resources this autumn.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
Teaming up in Ireland to address big challenges in biology
CONNECTIONS2014
connectionsevents
Genome Campus researchers discover that some immune cells turn themselves off by producing a steroid.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
Tsetse fly genome sequenced; scientists hope to find new ways to control sleeping sickness.
SCIENCE & TECHNOLOGY2014
sciencescience-technology
The thousands of bacteria, fungi and other microbes that live in our gut are essential contributors to our good health. They break down toxins, manufacture some vitamins and essential amino acids, and form a barrier against invaders. A study published today in Nature shows that, at 3.3 million,…
SCIENCE & TECHNOLOGY2010
sciencescience-technology
Although they are present almost everywhere, on land and sea, a group of related bacteria in the superphylum Planctomycetes-Verrucomicrobia-Chlamydiae, or PVC, have remained in relative obscurity ever since they were first described about a decade ago. Scientists at the European Molecular Biology…
SCIENCE & TECHNOLOGY2010
sciencescience-technology
ChEMBLdb, a vast online database of information on the properties and activities of drugs and drug-like small molecules and their targets, launches today with information on over half a million compounds. The data lie at the heart of translating information from the human genome into successful new…
SCIENCE & TECHNOLOGY2010
sciencescience-technology
Drawing on the expertise of multi-disciplinary research teams, the map developed by the 1000 Genomes Project will provide a view of biomedically relevant DNA variations at a resolution unmatched by current resources. The European Bioinformatics Institute (EBI), working with long-term collaborator…
LAB MATTERS2008
lab-matters
The European Molecular Biology Laboratory’s European Bioinformatics Institute (EMBL-EBI) officially opens its new East Wing today with a reception for prominent guests. The East Wing will be jointly opened by Ian Pearson, Minister of State for Science and Innovation, UK, and Robert-Jan Smits,…
LAB MATTERS2007
lab-matters
Today the European Molecular Biology Laboratory’s European Bioinformatics Institute (EMBL-EBI) launches CiteXplore, a new freely accessible literature resource service. Biological researchers require two crucial sources of information: scientific literature published in peerreviewed…
LAB MATTERSSCIENCE & TECHNOLOGY2006
lab-mattersscience-technology
EMBOSS, the European Molecular Biology Open Software Suite, has received a vital funding boost from the UK Biotechnology and Biological Sciences Research Council (BBSRC) that will guarantee its continued maintenance under an open source license for the next three years. This ends two years of…
CONNECTIONSLAB MATTERS2006
connectionslab-matters
The European Commission has selected the EBI to coordinate a project that will stimulate and explore synergies between bioinformatics (the science of storing, retrieving and analysing large amounts of biological information) and medical informatics (the science of processing, sharing and using…
CONNECTIONSLAB MATTERS2005
connectionslab-matters
The International Society for Computational Biology has named two scientists from the European Bioinformatics Institute as the winners of its awards for 2005. Janet Thornton wins the Senior Scientist Accomplishment Award while the Overton Prize goes to Ewan Birney. Thomas Lengauer, the ISCB’s…
EMBL ANNOUNCEMENTS2005
embl-announcements
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