Events archive

Bringing molecular structure to life: 50 years of the PDB

Stephen Cusack, Gerard Kleywegt, Christoph Mueller, Christine Orengo, Janet Thornton, Sameer Valenkar, Matthias Wilmanns

Stephen Cusack, Gerard Kleywegt, Christoph Mueller, Christine Orengo, Janet Thornton, Sameer Valenkar, Matthias Wilmanns Conference Virtual

Introduction to the EMBL-EBI bioinformatics tools framework

Ajay Mishra

Ajay Mishra Course Virtual

Open access: Finding and accessing open data

Ugis Sarkans, Anna Swan

Ugis Sarkans, Anna Swan Webinar Virtual

Analysis of huge metabolic models with COBREXA.jl

Miroslav Kratochvil

Miroslav Kratochvil Webinar Virtual

Solution scattering from biological macromolecules

M. Gräwert, A. Kikhney, D. Svergun

M. Gräwert, A. Kikhney, D. Svergun Course Virtual

Open access: publications and preprints

Mariia Levchenko

Mariia Levchenko Webinar Virtual

Microglia 2021

Sonia Garel, Florent Ginhoux, Dorothy Schafer, Amada Sierra

Sonia Garel, Florent Ginhoux, Dorothy Schafer, Amada Sierra Conference Virtual

A walk through the new UniProt website

Kate Warner, Aurelien Luciani

Kate Warner, Aurelien Luciani Webinar Virtual

Open access: Let's talk about open access, open data and open software

Renato Alves, Anthony Burdett, Mariia Levchenko, Sandra Orchard

Renato Alves, Anthony Burdett, Mariia Levchenko, Sandra Orchard Webinar Virtual

Virtual Ensembl Plants Browser Workshop

Michal Szpak

Michal Szpak Course Virtual

Getting gene and genome data programmatically: Ensembl REST API

Emily Perry

Emily Perry Webinar Virtual

Metagenomics bioinformatics

Juanita Riveros

Juanita Riveros Course Virtual

CABANA Virtual Workshop: Exploring biological networks and its application in health and disease

Dario Fernandez Do Porto

Dario Fernandez Do Porto Course Virtual

CABANA Virtual Workshop: Innovative methods for viral detection and discovery in genomic and metagenomic data

Arthur Gruber

Arthur Gruber Course Virtual

CABANA Virtual Workshop: Introducción a R y Bioconductor para análisis genómicos

A2B2C Courses

A2B2C Courses Course Virtual

Virtual Ensembl Plants REST API Workshop

Michal Szpak

Michal Szpak Course Virtual

A guide to accessing ChEMBL and UniChem through an API

Fiona Hunter, James Alan Blackshaw

Fiona Hunter, James Alan Blackshaw Webinar Virtual

Metabolism meets epigenetics

Theodore Alexandrov, Andreas Ladurner, Jane Mellor, Erika Pearce

Theodore Alexandrov, Andreas Ladurner, Jane Mellor, Erika Pearce Conference Virtual

Introduction to qualitative modelling with MaBoSS

Vincent Noël

Vincent Noël Webinar Virtual

Cancer genomics

Jan Korbel, Núria López-Bigas, Seishi Ogawa, Elli Papaemmanuil

Jan Korbel, Núria López-Bigas, Seishi Ogawa, Elli Papaemmanuil Conference Virtual

Analysing publications and funding with the Europe PMC REST API

Michael Parkin, Antonio Campello

Michael Parkin, Antonio Campello Webinar Virtual

Recent advances in structural biology of membrane proteins

Panagiotis Kastritis, Sandro Keller, Christian Löw, Cristina Paulino

Panagiotis Kastritis, Sandro Keller, Christian Löw, Cristina Paulino Conference Virtual

CABANA Virtual Workshop: Managing a Bioinformatics Core Facility

Rebeca Campos

Rebeca Campos Course Virtual

The BioImage Archive: Home for life sciences microscopy data

Matthew Hartley

Matthew Hartley Webinar Virtual

IITM-EMBL-EBI Winter School 2021

IBSE Workshop Team

IBSE Workshop Team Course Virtual

Ensembl Browser Virtual Workshop, December 2021

Aleena Mushtaq

Aleena Mushtaq Course Virtual

CABANA Workshop: Plant bioinformatics - analysis of crop genomics data

Juanita Riveros

Juanita Riveros Course Virtual

Virtual Ensembl REST-API Workshop, 14th-16th December

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Biomedicine, supercomputers and simulations: in silico experiments and its applications in cancer research

Miguel Ponce de León

Miguel Ponce de León Webinar Virtual

The big picture – zooming into life

2021 EMBL PhD Symposium Organising Committee

2021 EMBL PhD Symposium Organising Committee Conference Virtual

Deep learning for image analysis

Anna Kreshuk, Constanin Pape, Pejman Rasti, David Rousseau, Martin Weigert

Anna Kreshuk, Constanin Pape, Pejman Rasti, David Rousseau, Martin Weigert Course Virtual

Uncovering protein function with UniProt

Michele Magrane

Michele Magrane Webinar Virtual

Logic modelling of signalling networks – CellNOpt and CARNIVAL

Pablo Rodriguez Mier

Pablo Rodriguez Mier Webinar Virtual

The next generation in infection biology

Pedro Beltrao, Maria Bernabeu, Jan Kosinski, Eva Kowalinski, Nassos Typas

Pedro Beltrao, Maria Bernabeu, Jan Kosinski, Eva Kowalinski, Nassos Typas Conference Virtual

Guide to exploring genes and genomes with Ensembl

Aleena Mushtaq

Aleena Mushtaq Webinar Virtual

Exploratory analysis of biological data: data carpentry

Renato Alves, Fotis E. Psomopoulos, Christian Schudoma

Renato Alves, Fotis E. Psomopoulos, Christian Schudoma Course Virtual

SymbNET: from metagenomics to metabolic interactions

Jane Reynolds

Jane Reynolds Course Virtual

PATC: Introduction to HPC for Life Scientists

Daniel Thomas Lopez

Daniel Thomas Lopez Course Virtual

Federated analysis of human cohort data: The researcher’s journey

Daniel Thomas Lopez

Daniel Thomas Lopez Course EMBL-EBI

MetaboLights: the home for metabolomics experiments and derived information

Thomas Payne

Thomas Payne Webinar Virtual

Automated annotation in UniProt

Pedro Raposo, Hermann Zellner

Pedro Raposo, Hermann Zellner Webinar Virtual

The epitranscriptome

Michaela Frye, V. Narry Kim, Dónal O'Carroll

Michaela Frye, V. Narry Kim, Dónal O'Carroll Conference Virtual

Exploring genotype-phenotype data using the GWAS Catalog

Maria Cerezo

Maria Cerezo Webinar Virtual

CABANA Workshop: Bioinformatics approaches to viruses and genomic surveillance

Juanita Riveros

Juanita Riveros Course Virtual

Ensembl browser workshop, University of Cambridge

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Ensembl REST API workshop, University of Cambridge

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Social Media in Science Communication

Michelle Mendonca

Michelle Mendonca Webinar Virtual

Bioinformatics resources for protein biology

Jane Reynolds

Jane Reynolds Course Virtual

Introduction to RNA-seq and functional interpretation

Meredith Willmott

Meredith Willmott Course Virtual

Exploring Gene Ontology, GO annotations, tools and resources

Antonia Lock

Antonia Lock Webinar Virtual

Identifying tumor cells at the single cell level through machine learning

Altuna Akalin

Altuna Akalin Webinar Virtual

Analysis and integration of transcriptome and proteome data – Cancelled

Vladimir Benes, Raffaele Calogero, Jeroen Krijgsveld, Lennart Martens

Vladimir Benes, Raffaele Calogero, Jeroen Krijgsveld, Lennart Martens Course EMBL Heidelberg

Biological oscillators: design, mechanism, function

Alexander Aulehla, Hanspeter Herzel, Eve Marder, Ueli Schibler

Alexander Aulehla, Hanspeter Herzel, Eve Marder, Ueli Schibler Conference EMBL Heidelberg, Virtual

Single-cell RNA-seq analysis using Galaxy

Sophie Spencer

Sophie Spencer Course Virtual

Ensembl Browser Virtual Workshop, March 2022

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Methods for exploring newly-annotated species in Ensembl Rapid Release

Benjamin Moore

Benjamin Moore Webinar Virtual

Extracellular vesicles: from biology to biomedical applications – Cancelled

An Hendrix, Cecilia Lässer, Esther Nolte-’t Hoen, Guillaume Van Niel

An Hendrix, Cecilia Lässer, Esther Nolte-’t Hoen, Guillaume Van Niel Course EMBL Heidelberg

From 3D light to 3D electron microscopy

Raffaella Carzaniga, Lucy Collinson, Alexandra Elli, Chris Guérin, Anneke Kremer, Saskia Lippens, Paolo Ronchi, Yannick Schwab

Raffaella Carzaniga, Lucy Collinson, Alexandra Elli, Chris Guérin, Anneke Kremer, Saskia Lippens, Paolo Ronchi, Yannick Schwab Conference Virtual

Virtual Ensembl REST-API Workshop, March 2022

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Programming skills in biocuration

Elena Speretta, Pedro Raposo

Elena Speretta, Pedro Raposo Webinar Virtual

Discovering biological information from mass spectrometry-based proteomics

Tony Ly

Tony Ly Webinar Virtual

Inter-organ communication in physiology and disease

Gerard Karsenty, Irene Miguel-Aliaga, Miguel Soares

Gerard Karsenty, Irene Miguel-Aliaga, Miguel Soares Conference Virtual

Introduction to multi-omics data integration and visualisation

Juanita Riveros

Juanita Riveros Course Virtual

Text mining for biocuration

Shyamasree Saha, Michele Magrane

Shyamasree Saha, Michele Magrane Webinar Virtual

Methods in bioimage analysis

Christian Tischer

Christian Tischer Webinar Virtual

BioExcel school on biomolecular simulations

Marta Lloret Llinares

Marta Lloret Llinares Course Virtual

Ontologies for biocuration

Gun Antonia Nilsson Lock, Violeta Munoz-Pomer Fuentes

Gun Antonia Nilsson Lock, Violeta Munoz-Pomer Fuentes Webinar Virtual

Methods in genomic variant calling

Tobias Rausch

Tobias Rausch Webinar Virtual

Bringing it all together: human cohort standards, tools and applications

Melanie Courtot

Melanie Courtot Webinar Virtual

Data visualisation for biology

EMBL-EBI Training team

EMBL-EBI Training team Course EMBL-EBI

Gene expression at single-cell resolution

Vladimir Benes, Dirk Jürgensen, Elisabeth Zielonka

Vladimir Benes, Dirk Jürgensen, Elisabeth Zielonka Course Virtual

Working with sensitive data

Marcos Casado Barbero, Dona Shaju

Marcos Casado Barbero, Dona Shaju Webinar Virtual

Microbial infections and human cancer

Achim Breiling, Christian Jobin, Xin Lu, Thomas Meyer, Jacques Neefjes

Achim Breiling, Christian Jobin, Xin Lu, Thomas Meyer, Jacques Neefjes Conference Virtual

Methods for rare-variant association analysis

Alexey Larionov

Alexey Larionov Webinar Virtual

UniProt for proteomics scientists

Emily Bowler-Barnett

Emily Bowler-Barnett Webinar Virtual

Biocuration in industry

Rachael Huntley, George Georghiou

Rachael Huntley, George Georghiou Webinar Virtual

SciELO Preprints in Europe PMC

Summer Rosonovski, Alex Mendonça

Summer Rosonovski, Alex Mendonça Webinar Virtual

Methods in building and analysing biological networks

Livia Perfetto

Livia Perfetto Webinar Virtual

Methods for analysis of circRNAs: from discovery to function

Marie-Laure Baudet, Vladimir Benes, Irene Bozzoni, Christoph Dieterich

Marie-Laure Baudet, Vladimir Benes, Irene Bozzoni, Christoph Dieterich Course EMBL Heidelberg

Exploring parasite biology through their protein annotation in UniProtKB

Rossana Zaru

Rossana Zaru Webinar Virtual

Mathematical modelling as knowledge mapping in PhysiCell: a guided tour

Paul Macklin

Paul Macklin Webinar Virtual

Approaches for using protein-protein interaction networks for biological discovery

Katja Luck

Katja Luck Webinar Virtual

Hands-on flow cytometry: learning by doing!

Andrew Filby, Diana Ordonez, Malte Paulsen, Steffen Schmitt

Andrew Filby, Diana Ordonez, Malte Paulsen, Steffen Schmitt Course EMBL Heidelberg

PDBe-KB Aggregated Views: providing biological insights into 3D structures

Preeti Choudhary

Preeti Choudhary Webinar Virtual

Cellular mechanisms driven by phase separation

Simon Alberti, Dorothee Dormann, Edward Lemke, Tanja Mittag

Simon Alberti, Dorothee Dormann, Edward Lemke, Tanja Mittag Conference EMBL Heidelberg, Virtual

Building networks: engineering in vascular biology

Conference EMBL Barcelona

Attacking open chromatin with ATAC sequencing

V. Benes, U. Litzenburger, J. Zaugg

V. Benes, U. Litzenburger, J. Zaugg Course EMBL Heidelberg

Selecting and evaluating preprints for Journal Club

Summer Rosonovski, Ester Gea-Mallorquí

Summer Rosonovski, Ester Gea-Mallorquí Webinar Virtual

Mechanobiology in development and disease

Alba Diz-Muñoz, Carl-Philipp Heisenberg, Prisca Liberali, Anđela Šarić, Xavier Trepat

Alba Diz-Muñoz, Carl-Philipp Heisenberg, Prisca Liberali, Anđela Šarić, Xavier Trepat Conference EMBL Heidelberg, Virtual

Microscopy data analysis: machine learning and the BioImage Archive

Juanita Riveros

Juanita Riveros Course Virtual

Exploring human genetic variation

Jane Reynolds

Jane Reynolds Course Virtual

Advanced fluorescence imaging techniques

Course Virtual

BioMalPar XVIII: biology and pathology of the malaria parasite

R. Dzikowski, S. Reece, M. Mota, C. Moxon

R. Dzikowski, S. Reece, M. Mota, C. Moxon Conference EMBL Heidelberg, Virtual

Introduction to metabolomics analysis

Meredith Willmott

Meredith Willmott Course EMBL-EBI

Exploring sequence alignment tools with Job Dispatcher

Nandana Madhusoodanan

Nandana Madhusoodanan Webinar Virtual

Characterization of macromolecular complexes by integrative structural biology

Course EMBL Grenoble

Whole transcriptome data analysis

Marco Beccuti, Vladimir Benes, Raffaele Calogero, Francesca Cordero

Marco Beccuti, Vladimir Benes, Raffaele Calogero, Francesca Cordero Course EMBL Heidelberg

Computer-assisted functional precision medicine in cancer

Åsmund Flobak

Åsmund Flobak Webinar Virtual

Microtubules: from atoms to complex systems

Anna Akhmanova, Carsten Janke, Kassandra Ori-McKenney, Manuel Théry

Anna Akhmanova, Carsten Janke, Kassandra Ori-McKenney, Manuel Théry Conference EMBL Heidelberg, Virtual

Bioinformatics for Principal Investigators

Juanita Riveros

Juanita Riveros Course EMBL-EBI

Open-access to genetic variation data at the European Variation Archive

Baron Koylass

Baron Koylass Webinar Virtual

The PerMedCoE competency framework to guide training and career development

Vera Matser, Marta Lloret Llinares

Vera Matser, Marta Lloret Llinares Webinar Virtual

Humanized mice, personalized therapies and big data

Karl-Dimiter Bissig, Ernesto de la Cueva Bueno, Christian Münz, J.J. Schuringa, Leonard Shultz, Brian Soper, Renata Stripecke

Karl-Dimiter Bissig, Ernesto de la Cueva Bueno, Christian Münz, J.J. Schuringa, Leonard Shultz, Brian Soper, Renata Stripecke Course EMBL Heidelberg

BioExcel summer school on biomolecular simulations 2022

Jane Reynolds

Jane Reynolds Course EMBL Rome

Summer school in bioinformatics

EMBL-EBI Training team

EMBL-EBI Training team Course EMBL-EBI

Scope and vision of AlphaFold

Kathryn Tunyasuvunakool , Randy J Read, Sergey Ovchinnikov

Kathryn Tunyasuvunakool , Randy J Read, Sergey Ovchinnikov Webinar Virtual

PRIDE database: Proteomics data submission, access and visualisation

Deepti Jaiswal Kundu

Deepti Jaiswal Kundu Webinar Virtual

Defining and defeating metastasis

Johanna Joyce, Daniel Klimmeck, Joan Massagué, Charles Swanton

Johanna Joyce, Daniel Klimmeck, Joan Massagué, Charles Swanton Conference EMBL Heidelberg, Virtual

Cancer genomics

Jane Reynolds

Jane Reynolds Course EMBL-EBI

Impact of AlphaFold on teaching and training in life sciences

Alexandre Bonvin, Ezgi Karaca, Panagiotis L. Kastritis, Dina Schneidman

Alexandre Bonvin, Ezgi Karaca, Panagiotis L. Kastritis, Dina Schneidman Webinar Virtual

HPC boosts mathematical models’ promises of personalised medicine

Laurence Calzone, Arnau Montagud

Laurence Calzone, Arnau Montagud Webinar Virtual

An introduction to the COVID-19 Data Portal

Nadim Mahdi Rahman

Nadim Mahdi Rahman Webinar Virtual

Impact of AlphaFold on research and development

Jan Kosinski, Katja Luck, Juan Carlos Mobarec, Juri Rappsilber, Janet Thornton, Randy J Read

Jan Kosinski, Katja Luck, Juan Carlos Mobarec, Juri Rappsilber, Janet Thornton, Randy J Read Webinar Virtual

Timing mechanisms linking development and evolution

James Briscoe, Megan Davey, Miki Ebisuya, Pierre Vanderhaeghen

James Briscoe, Megan Davey, Miki Ebisuya, Pierre Vanderhaeghen Conference EMBL Barcelona

Systems biology: from large datasets to biological insight

Meredith Willmott

Meredith Willmott Course EMBL-EBI

Visualising life – interdisciplinary approaches to biology

Course EMBL Heidelberg

Super-resolution microscopy: time-resolved STED nanoscopy

Marco Lampe, Rainer Pepperkok, Ulf Schwarz

Marco Lampe, Rainer Pepperkok, Ulf Schwarz Course Virtual

Microfluidics 2022

Christoph Merten, Angela Wu

Christoph Merten, Angela Wu Conference EMBL Heidelberg, Virtual

Bioinformatics for T-Cell immunology

Sophie Spencer

Sophie Spencer Course EMBL-EBI

Innate immunity in host-pathogen interactions

Bernhard Hube, Julie Pfeiffer, Felix Randow, Feng Shao, Cyril Zipfel

Bernhard Hube, Julie Pfeiffer, Felix Randow, Feng Shao, Cyril Zipfel Conference EMBL Heidelberg, Virtual

C. elegans: from genome editing to imaging

Henrik Bringmann, Simone Köhler, Georgia Rapti, Pavak Shah

Henrik Bringmann, Simone Köhler, Georgia Rapti, Pavak Shah Course EMBL Heidelberg

Proteomics bioinformatics

Juanita Riveros

Juanita Riveros Course EMBL-EBI

Advances in cryo-electron microscopy and 3D image processing

Julia Mahamid, Sebastian Eustermann, Simone Mattei, Lori Passmore, Henning Stahlberg

Julia Mahamid, Sebastian Eustermann, Simone Mattei, Lori Passmore, Henning Stahlberg Course EMBL Heidelberg

Transcription and chromatin

Karen Adelman, Eileen Furlong, Jürg Müller, Peter Verrijzer

Karen Adelman, Eileen Furlong, Jürg Müller, Peter Verrijzer Conference EMBL Heidelberg, Virtual

Current methods in cell biology

Sara Cuylen-Häring, Simone Köhler

Sara Cuylen-Häring, Simone Köhler Course EMBL Heidelberg

Chemical biology 2022

Yimon Aye, Claire Deo, Kai Johnsson, Edward Lemke

Yimon Aye, Claire Deo, Kai Johnsson, Edward Lemke Conference EMBL Heidelberg, Virtual

Membrane protein expression, purification and characterization (mPEPC2)

Course EMBL Hamburg

Synthetic biology in action: beyond standard metabolism

Sven Panke, Vitor Pinheiro, Karen Polizzi, Elisabeth Zielonka

Sven Panke, Vitor Pinheiro, Karen Polizzi, Elisabeth Zielonka Course EMBL Heidelberg

Organisation and utilisation of hologenomic datasets

Charlotte Pearton

Charlotte Pearton Course EMBL Barcelona

Mathematics of life: modelling molecular mechanisms

Juanita Riveros

Juanita Riveros Course Virtual

Reconstructing the human past: using ancient and modern genomics

Johannes Krause, Anna-Sapfo Malaspinas, Ida Moltke, David Reich

Johannes Krause, Anna-Sapfo Malaspinas, Ida Moltke, David Reich Conference EMBL Heidelberg, Virtual

Imaging down to single-molecule resolution: STED and MINFLUX nanoscopy

Marko Lampe, Julia Menzel, Christian Wurm, Timo Zimmermann

Marko Lampe, Julia Menzel, Christian Wurm, Timo Zimmermann Course EMBL Heidelberg

Integrative analysis of multi-omics data

Wolfgang Huber, Oliver Stegle, Britta Velten

Wolfgang Huber, Oliver Stegle, Britta Velten Course EMBL Heidelberg

An introduction to EMBL-EBI resources

Sarah Morgan

Sarah Morgan Webinar Virtual

A guided tour of the new and improved UniProt website

Kate Warner

Kate Warner Webinar Virtual

Bioinformatics and functional genomics in zebrafish

Meredith Willmott

Meredith Willmott Course EMBL-EBI

Finding Pfam's protein families data in the InterPro website

Webinar Virtual

Programmatic access to UniProt using Python

Emily Bowler-Barnett, Aurelien Luciani

Emily Bowler-Barnett, Aurelien Luciani Webinar Virtual

Single-cell RNA-seq analysis using R

Jane Reynolds

Jane Reynolds Course Virtual

Molecular mechanisms in evolution and ecology

Gianni Liti, Sara Mitri, Kiran Patil, Kimberley Kline, Antonis Rokas

Gianni Liti, Sara Mitri, Kiran Patil, Kimberley Kline, Antonis Rokas Conference EMBL Heidelberg, Virtual

Introductory bioinformatics Q&A session: genes and gene expression

Aleena Mushtaq, Sarah Morgan, Nancy George, Benjamin Moore, Anja Fullgrabe, Louisse Paola Mirabueno

Aleena Mushtaq, Sarah Morgan, Nancy George, Benjamin Moore, Anja Fullgrabe, Louisse Paola Mirabueno Webinar Virtual

Genome engineering: CRISPR/Cas from cells to mice

N. Humphreys, B. Koch, P. Rajakannu, E. Zielonka

N. Humphreys, B. Koch, P. Rajakannu, E. Zielonka Course EMBL Heidelberg

Data protection and security aspects of running simulations on personal data with HPC

Laurence Calzone, Arnau Montagud

Laurence Calzone, Arnau Montagud Webinar Virtual

The complex life of RNA

Anne Ephrussi, Wendy V. Gilbert, Torben Heick Jensen, Ramesh Pillai

Anne Ephrussi, Wendy V. Gilbert, Torben Heick Jensen, Ramesh Pillai Conference EMBL Heidelberg, Virtual

Introductory bioinformatics Q&A session: proteins and structures

Emily Bowler-Barnett, Anna Swan, Deborah Harrus, David Armstrong

Emily Bowler-Barnett, Anna Swan, Deborah Harrus, David Armstrong Webinar Virtual

Metabolite and species dynamics in microbial communities

Sandeep Krishna, Sunil Laxman, Kiran Patil, Elisabeth Zielonka, Maria Zimmermann

Sandeep Krishna, Sunil Laxman, Kiran Patil, Elisabeth Zielonka, Maria Zimmermann Course EMBL Heidelberg, Other

Structural bioinformatics

Juanita Riveros

Juanita Riveros Course Virtual

Bioinformatics approaches to viruses

Sophie Spencer

Sophie Spencer Course Virtual

Using fish models to explore the impact of Gene by Environment (GxE) 2022

Charlotte Pearton and Meredith Willmott

Charlotte Pearton and Meredith Willmott Course Virtual

EMBL Open Science Workshop 2022

Sophie Spencer

Sophie Spencer Course Virtual

Plasticity across scales: from molecules to phenotypes

Ehab Abouheif, Alexander Aulehla, Axel Meyer, Sonia Sultan

Ehab Abouheif, Alexander Aulehla, Axel Meyer, Sonia Sultan Conference EMBL Heidelberg, Virtual

A guide to UniProt for students

Paul Denny

Paul Denny Webinar Virtual

The fundamentals of high-end cell sorting

Derek Davis, Andrew Filby, Diana Ordoñez-Rueda, Malte Paulsen, Steffen Schmitt

Derek Davis, Andrew Filby, Diana Ordoñez-Rueda, Malte Paulsen, Steffen Schmitt Course EMBL Heidelberg

Genome-resolved metagenomics bioinformatics

Shereen Pethania

Shereen Pethania Course Virtual

Finding and using publicly available data Q&A session

Webinar Virtual

Practical integrative structural biology

Course EMBL Hamburg

The neurovascular interface

Amparo Acker-Palmer, Ralf Adams, Chenghua Gu

Amparo Acker-Palmer, Ralf Adams, Chenghua Gu Conference EMBL Heidelberg, Virtual

Bioinformatics tools and data retrieval

Nandana Madhusoodanan

Nandana Madhusoodanan Course Virtual

Improving data reproducibility for chemosensitivity assays using MICHA

Jing Tang

Jing Tang Webinar Virtual

Modular and reproducible workflows for federated molecular QTL analysis

Webinar Virtual

Single-cell omics: deeper to genomics

Qiaolin Deng, Jan O. Korbel, Anders Ståhlberg, Elisabeth Zielonka

Qiaolin Deng, Jan O. Korbel, Anders Ståhlberg, Elisabeth Zielonka Course EMBL Heidelberg

Genome bioinformatics: resequencing and variant calling

Juanita Riveros

Juanita Riveros Course Virtual

From functional genomics to systems biology

Arnaud Krebs, Prisca Liberali, Mikhail Savitski, Georg Seelig

Arnaud Krebs, Prisca Liberali, Mikhail Savitski, Georg Seelig Conference EMBL Heidelberg, Virtual

Systematising complex and combined metabolic analyses with COBREXA.jl

Daniel Thomas López

Daniel Thomas López Course Virtual

Open Virtual Ensembl Browser Workshop

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Croupier, an user-centric meta-orchestrator for cross-platform workflow delivery and execution

Webinar Virtual

Uncovering protein function with UniProt

Michele Magrane

Michele Magrane Webinar Virtual

Open Virtual Ensembl API Workshop

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Managing a bioinformatics core facility

Sophie Spencer

Sophie Spencer Course Virtual

The environmental impact of computational biology

Loïc Lannelongue

Loïc Lannelongue Webinar Virtual

Protein quality control for downstream processes

Karine Lapouge, Kim Remans

Karine Lapouge, Kim Remans Course EMBL Heidelberg

Biocuration Q&A session

Webinar Virtual

The spectra of life: dimensional breadth in biological research

2022 EMBL PhD Symposium Organising Committee

2022 EMBL PhD Symposium Organising Committee Conference EMBL Heidelberg, Virtual

Chemical biology Q&A session

Webinar Virtual

Automated annotation in UniProt

Pedro Raposo, Elena Speretta

Pedro Raposo, Elena Speretta Webinar Virtual

Exploring somatic mutations in cancer with the COSMIC database and analysis tools

Rebecca White, Steven Jupe, Jennifer Wilding, Michael Starkey, Helder Pedro

Rebecca White, Steven Jupe, Jennifer Wilding, Michael Starkey, Helder Pedro Webinar Virtual

Introducing PerMedCoE Building Blocks and Workflows to streamline biological analysis pipelines

Jesse Harrison

Jesse Harrison Webinar Virtual

Introduction to EMBL-EBI for teachers and trainers

Anna Swan, Benjamin Moore, Summer Rosonovski

Anna Swan, Benjamin Moore, Summer Rosonovski Webinar Virtual

Computing skills for reproducible research: data carpentry

Renato Alves, Lisanna Paladin, Fotis Psomopoulos, Christian Schudoma

Renato Alves, Lisanna Paladin, Fotis Psomopoulos, Christian Schudoma Course EMBL Heidelberg

Data-driven modelling of intercellular interactions in the tumour microenvironment

Vera Pancaldi

Vera Pancaldi Webinar Virtual

Accessing fine-grained Molecular Interactions data with IntAct

Kalpana Panneerselvam

Kalpana Panneerselvam Webinar Virtual

Amity University EMBL-EBI workshop 2023

Ben Moore

Ben Moore Course EMBL-EBI

EuroFAANG GENE-SWitCH workshop: utilisation of GENE-SWitCH data in Ensembl and beyond

Peter Harrison

Peter Harrison Course Virtual

Federated analysis for polygenic risk score calculations

Will Rayner, Anshika Chowdhary

Will Rayner, Anshika Chowdhary Webinar Virtual

Exploring reproducible and reusable systems biology models with BioModels

Rahuman Sheriff Malik Sheriff

Rahuman Sheriff Malik Sheriff Webinar Virtual

Single-cell RNA-seq analysis using Galaxy

Jane Reynolds

Jane Reynolds Course Virtual

In situ structural biology: from cryo-EM to multi-scale modelling

Martin Beck, Jan Kosinski, Julia Mahamid, Suliana Manley

Martin Beck, Jan Kosinski, Julia Mahamid, Suliana Manley Conference EMBL Heidelberg, Virtual

The case of data reuse: ethical, legal, and societal issues in international genomic data access and sharing

Melanie Goisauf, Emmanuelle Rial-Sebbag

Melanie Goisauf, Emmanuelle Rial-Sebbag Webinar Virtual

Accessing human disease and protein variant information in UniProtKB

Yvonne Lussi

Yvonne Lussi Webinar Virtual

In situ CLEM at room temperature and in cryo

Ori Avinoam, Rachel Mellwig, Martin Schorb

Ori Avinoam, Rachel Mellwig, Martin Schorb Course EMBL Heidelberg

Introduction to RNA-seq and functional interpretation

Sophie Spencer

Sophie Spencer Course EMBL-EBI

Interrogating the effect of enzyme kinetics on metabolism using differentiable constraint-based models

St. Elmo Wilken

St. Elmo Wilken Webinar Virtual

Accessing variant data at the European Variation Archive

Baron Koylass

Baron Koylass Webinar Virtual

Analysis and integration of transcriptome and proteome data

Vladimir Benes, Raffaele Calogero, Jeroen Krijgsveld, Lennart Martens

Vladimir Benes, Raffaele Calogero, Jeroen Krijgsveld, Lennart Martens Course EMBL Heidelberg

Exploring plant genes and genomes with Ensembl

Guy Naamati

Guy Naamati Webinar Virtual

UniProt for proteomics scientists

Emily Bowler-Barnett

Emily Bowler-Barnett Webinar Virtual

Techniques for mammary gland research

Martin Jechlinger, Renée van Amerongen, María dM Vivanco

Martin Jechlinger, Renée van Amerongen, María dM Vivanco Course EMBL Heidelberg

Introduction to multi-omics data integration and visualisation

Shereen Pethania

Shereen Pethania Course EMBL-EBI

Introduction to HPC for Life Scientists

Marta Lloret Llinares

Marta Lloret Llinares Course EMBL Barcelona

Open Virtual Ensembl Browser Workshop

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Data submission for genome-wide association studies at the GWAS Catalog

Elliot Sollis

Elliot Sollis Webinar Virtual

The cellular mechanics of symbiosis

Toby Kiers, John McCutcheon, Thomas Richards

Toby Kiers, John McCutcheon, Thomas Richards Conference EMBL Heidelberg, Virtual

Non-invasive phenotyping to quantify the dynamics of plant-environment interaction

Ulrich Schurr, Roland Pieruschka, Sven Fahrner

Ulrich Schurr, Roland Pieruschka, Sven Fahrner Webinar Virtual

Supercomputer-based modelling and simulation for advanced biomedical applications

Mariano Vázquez

Mariano Vázquez Webinar Virtual

Extracellular vesicles: from biology to biomedical applications

An Hendrix, Cecilia Lässer, Esther Noltet Hoen, Guillaume Van Niel

An Hendrix, Cecilia Lässer, Esther Noltet Hoen, Guillaume Van Niel Course EMBL Heidelberg

Open Virtual Ensembl REST API Workshop

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Applying mathematical modelling to biological problems in plant science

Rea Laila Antoniou-Kourounioti, John Fozard

Rea Laila Antoniou-Kourounioti, John Fozard Webinar Virtual

Exploring human genetic variation

Juanita Riveros

Juanita Riveros Course Virtual

Discover drug targets with Europe PMC Machine Learning Dataset and Open Targets

Webinar Virtual

Single-cell and spatial omics technologies in plant science

Tatsuya Nobori

Tatsuya Nobori Webinar Virtual

Development of a virtual Rheumatoid Arthritis synovial fibroblast for large-scale dynamic analysis and efficient drug-target identification

Anna Niarakis

Anna Niarakis Webinar Virtual

Measuring translational dynamics by ribosome profiling

Pavel Baranov, Sebastian Leidel, Jan Medenbach, Elisabeth Zielonka

Pavel Baranov, Sebastian Leidel, Jan Medenbach, Elisabeth Zielonka Course EMBL Heidelberg

Visualizing biological data (VIZBI 2023)

Barbora Kozlikova, Marc A. Marti-Renom, Andrea Schafferhans, Nico Scherf, Michelle Scott, Srigokul Upadhyayula

Barbora Kozlikova, Marc A. Marti-Renom, Andrea Schafferhans, Nico Scherf, Michelle Scott, Srigokul Upadhyayula Conference EMBL Heidelberg, Virtual

Introduction to metabolomics analysis

Jane Reynolds

Jane Reynolds Course EMBL-EBI

Pangenomics and machine learning for crop improvement

Dave Edwards

Dave Edwards Webinar Virtual

Microbial metagenomics: a 360º approach

Vladimir Benes, Giuseppe D´Auria, José Eduardo González-Pastor, Elisabeth Zielonka

Vladimir Benes, Giuseppe D´Auria, José Eduardo González-Pastor, Elisabeth Zielonka Course EMBL Heidelberg

EuroFAANG AQUA-FAANG workshop: methods to use and reuse the AQUA-FAANG data and Ensembl resources to advance science

Peter Harrison

Peter Harrison Course Virtual

From transcriptomics to mechanistic models of signalling

Daniel V. Thomas Lopez

Daniel V. Thomas Lopez Course Virtual

Kew tree of life project: discovering the phylogeny of all flowering plants

Bill Baker

Bill Baker Webinar Virtual

Brain genome: regulation, evolution, and function

Roberto Bonasio, Matthieu Boulard, Magdalena Götz, Kyung-Min Noh

Roberto Bonasio, Matthieu Boulard, Magdalena Götz, Kyung-Min Noh Conference EMBL Heidelberg, Virtual

Bioinformatics resources for protein biology

Juanita Riveros

Juanita Riveros Course Virtual

Applications and impacts of the BrAPI project on plant breeding

Peter Selby

Peter Selby Webinar Virtual

Historical perspectives on plant science databases

Helen Anne Curry

Helen Anne Curry Webinar Virtual

Advanced fluorescence imaging techniques

Aliaksandr Halavatyi, Stefan Marawske, Rainer Pepperkok, Stefan Terjung

Aliaksandr Halavatyi, Stefan Marawske, Rainer Pepperkok, Stefan Terjung Course EMBL Heidelberg

Data visualisation for biology

Jane Reynolds

Jane Reynolds Course EMBL-EBI

The organism and its environment

Detlev Arendt, Edith Heard, Maria Leptin, Fiona Watt, Detlef Weigel

Detlev Arendt, Edith Heard, Maria Leptin, Fiona Watt, Detlef Weigel Conference EMBL Heidelberg, Virtual

Data protection and privacy preservation in software development

Webinar Virtual

Developing an improved understanding of the structure and function of the wheat root microbiome

Tim Mauchline

Tim Mauchline Webinar Virtual

Chromatin and epigenetics

Asifa Akhtar, Yehudit Bergman, Nicola Iovino, Gary Karpen, Sarah Teichmann

Asifa Akhtar, Yehudit Bergman, Nicola Iovino, Gary Karpen, Sarah Teichmann Conference EMBL Heidelberg, Virtual

Practical biocuration

Sophie Spencer

Sophie Spencer Course EMBL-EBI

Annotating genomes with non-coding RNAs using Rfam and Infernal

Webinar Virtual

Whole transcriptome data analysis

Marco Beccuti, Vladimir Benes, Raffaele Calogero, Francesca Cordero

Marco Beccuti, Vladimir Benes, Raffaele Calogero, Francesca Cordero Course EMBL Heidelberg

Microscopy data analysis: machine learning and the BioImage Archive

Shereen Pethania

Shereen Pethania Course Virtual

Expansion microscopy

Niccolo Banterle, Gautam Dey, Paul Guichard, Virginie Hamel, Marine Laporte

Niccolo Banterle, Gautam Dey, Paul Guichard, Virginie Hamel, Marine Laporte Course EMBL Heidelberg

BioMalPar XIX: biology and pathology of the malaria parasite

Conference EMBL Heidelberg, Virtual

A beginner’s guide to interpreting results from biostatistics

Webinar Virtual

Contextualising human missense variation with ProtVar

Webinar Virtual

The ageing genome: from mechanisms to disease

Jacqueline Jacobs, Gaëlle Legube, Brian Luke, Björn Schumacher

Jacqueline Jacobs, Gaëlle Legube, Brian Luke, Björn Schumacher Conference EMBL Heidelberg, Virtual

Deep learning for image analysis

Anna Kreshuk, Constanin Pape, Pejman Rasti, Daid Rousseau, Martin Weigert

Anna Kreshuk, Constanin Pape, Pejman Rasti, Daid Rousseau, Martin Weigert Course EMBL Heidelberg

Improving the accessibility of the EMBL-EBI website: background, process, and lessons

Webinar Virtual

Quantitative proteomics: strategies and tools to probe biology

Jeroen Krijgsveld, Christina Ludwig, Mikhail Savitski

Jeroen Krijgsveld, Christina Ludwig, Mikhail Savitski Course EMBL Heidelberg

Life at the periphery: mechanobiology of the cell surface

Alba Diz Muñoz, Zemer Gitai, KC Huang, Ewa Paluch

Alba Diz Muñoz, Zemer Gitai, KC Huang, Ewa Paluch Conference EMBL Heidelberg, Virtual

Summer school in bioinformatics

Sophie Spencer

Sophie Spencer Course EMBL-EBI

Utilising GPUs in scientific algorithms

Adam Smelko

Adam Smelko Webinar Virtual

Computational modelling of multicellular systems

Katie Bentley, James Sharpe, Alejandro Torres-Sánchez

Katie Bentley, James Sharpe, Alejandro Torres-Sánchez Course EMBL Barcelona

Terra incognita: navigating ethical boundaries in the life sciences

Lucia von Bredow

Lucia von Bredow Conference Virtual

Bioinformatics for principal investigators

Jane Reynolds

Jane Reynolds Course EMBL-EBI

A guide to identifying suitable patient-derived cancer models in CancerModels.Org

Webinar Virtual

Imaging-based spatial-omics

Alvaro Crevenna, Emerald Perlas, Sinem Saka

Alvaro Crevenna, Emerald Perlas, Sinem Saka Course EMBL Rome

PerMedCoE summer school: from pathway modelling tools to cell-level simulations

Juanita Riveros

Juanita Riveros Course EMBL Barcelona

New approaches and concepts in microbiology

Pascale Cossart, Sophie Helaine, KC Huang, Michael Laub, Nassos Typas

Pascale Cossart, Sophie Helaine, KC Huang, Michael Laub, Nassos Typas Conference EMBL Heidelberg, Virtual

Developing community resources for bioimage analysis training

Webinar Virtual

Proteomics bioinformatics

Shereen Pethania

Shereen Pethania Course EMBL-EBI

Development and morphogenesis: Symposium in honour of Maria Leptin

Fiona Watt

Fiona Watt Conference Other

A guide to sequence analysis resources in Job Dispatcher

Webinar Virtual

Cancer genomics and transcriptomics

Sophie Spencer

Sophie Spencer Course EMBL-EBI

Fluorescence imaging beyond intensity

Luis Alvarez, Manuel Gunkel, Birgit Koch, Andrea Mülter

Luis Alvarez, Manuel Gunkel, Birgit Koch, Andrea Mülter Course EMBL Heidelberg

Predicting evolution

Justin Crocker, Gautam Dey, Joshua Payne, Patricia Wittkopp

Justin Crocker, Gautam Dey, Joshua Payne, Patricia Wittkopp Conference EMBL Heidelberg, Virtual

Open Virtual Ensembl Browser Workshop

Louisse Paola Mirabueno

Louisse Paola Mirabueno Course Virtual

Drosophila genetics and genomics

Justin Crocker, Kate O'Connor-Giles, Ella Preger-Ben Noon, Andreas Prokop

Justin Crocker, Kate O'Connor-Giles, Ella Preger-Ben Noon, Andreas Prokop Course EMBL Heidelberg, Virtual

Theory and concepts in biology

Alexander Aulehla, Jordi Garcia-Ojalvo, Robert Phillips. Kirsty Wan

Alexander Aulehla, Jordi Garcia-Ojalvo, Robert Phillips. Kirsty Wan Conference EMBL Heidelberg, Virtual

Open Virtual Ensembl REST API Workshop

Louisse Paola Mirabueno

Louisse Paola Mirabueno Course Virtual

Plasticity in developing systems: time, space, and environment

Alexander Aulehla, Aissam Ikmi, Nicoletta Petridou, Alessandra Reversi

Alexander Aulehla, Aissam Ikmi, Nicoletta Petridou, Alessandra Reversi Course EMBL Heidelberg

Protein synthesis and translational control

Alfredo Castello, Fátima Gebauer, Matthias Hentze, Jerry Pelletier,Christian Spahn

Alfredo Castello, Fátima Gebauer, Matthias Hentze, Jerry Pelletier,Christian Spahn Conference EMBL Heidelberg, Virtual

Advanced methods in bioimage analysis

Ignacio Arganda-Carreras, Anna Klemm, Perrine Paul-Gilloteaux, Christian Tischer

Ignacio Arganda-Carreras, Anna Klemm, Perrine Paul-Gilloteaux, Christian Tischer Course EMBL Heidelberg

Developmental metabolism: flows of energy, matter, and information

Alexander Aulehla, Heidi Lempradl, Jonathan Rodenfels

Alexander Aulehla, Heidi Lempradl, Jonathan Rodenfels Conference EMBL Heidelberg, Virtual

Digital twins for drug repurposing by integrating mathematical modelling and machine learning: bridging the gap between in silico and real-world data

Joaquín Dopazo

Joaquín Dopazo Webinar Virtual

Genome engineering: CRISPR/Cas from cells to mice

Neil Humphreys, Kristof Kersse, Birgit Koch, Elisabeth Zielonka

Neil Humphreys, Kristof Kersse, Birgit Koch, Elisabeth Zielonka Course EMBL Heidelberg

Single cell RNA-seq analysis using Python

Juanita Riveros

Juanita Riveros Course Virtual

CCPBioSim workshop: structural bioinformatics resources and tools for molecular dynamics simulations

Jane Reynolds

Jane Reynolds Course EMBL-EBI

The human microbiome

Manimozhiyan Arumugam, Ami Bhatt, Peer Bork, Nicola Segata

Manimozhiyan Arumugam, Ami Bhatt, Peer Bork, Nicola Segata Conference EMBL Heidelberg, Virtual

Using RNAcentral to explore and investigate non-coding RNA sequences

Webinar Virtual

A guided tour of improvements to the UniProt website

Webinar Virtual

Nucleotide sequencing data submission and retrieval at the ENA

Webinar Virtual

Structural bioinformatics

Sophie Spencer

Sophie Spencer Course EMBL-EBI

Seeing is believing: imaging the molecular processes of life

Jan Ellenberg, Jennifer Lippincott-Schwartz, Satyajit Mayor, Atsushi Miyawaki

Jan Ellenberg, Jennifer Lippincott-Schwartz, Satyajit Mayor, Atsushi Miyawaki Conference EMBL Heidelberg, Virtual

Studying genes and genomes with Ensembl genome browser

Webinar Virtual

Poster winners, PerMedCoE Summer School 2023

Viviam Bermúdez, Marco Fariñas, Malvina Marku

Viviam Bermúdez, Marco Fariñas, Malvina Marku Webinar Virtual

Liquid biopsies

Anders Ståhlberg, Karin Sundfeldt

Anders Ståhlberg, Karin Sundfeldt Course EMBL Heidelberg

Metagenomics bioinformatics at MGnify

Meredith Willmott

Meredith Willmott Course EMBL-EBI

Open Virtual Ensembl Browser Workshop

Benjamin Moore

Benjamin Moore Course Virtual

The non-coding genome

Marc Bühler, Anna Eulálio, Joshua Mendell, Gisela Storz, Igor Ulitsky

Marc Bühler, Anna Eulálio, Joshua Mendell, Gisela Storz, Igor Ulitsky Conference EMBL Heidelberg, Virtual

Accessing and interpreting predicted protein structures from AlphaFold database

Webinar Virtual

Open Virtual Ensembl REST API Workshop

Louisse Paola Mirabueno

Louisse Paola Mirabueno Course Virtual

Organoids: modelling organ development and disease in 3D culture

Meritxell Huch, Karl R. Koehler, Madeline Lancaster, Esther Schnapp

Meritxell Huch, Karl R. Koehler, Madeline Lancaster, Esther Schnapp Conference EMBL Heidelberg, Virtual

Finding and interpreting protein structure and function data using PDBe-KB

Webinar Virtual

FISHing for RNAs: classical to single molecule approaches

Monica Ballarino, Imre Gaspar, Emerald Perlas, Elisabeth Zielonka

Monica Ballarino, Imre Gaspar, Emerald Perlas, Elisabeth Zielonka Course EMBL Heidelberg, Virtual

Systems biology: from large datasets to biological insight

Jane Reynolds

Jane Reynolds Course EMBL-EBI

Proteomics in cell biology and disease mechanisms

Yu-Ju Chen, Ileana Cristea, Albert Heck, Matthias Mann

Yu-Ju Chen, Ileana Cristea, Albert Heck, Matthias Mann Conference EMBL Heidelberg, Virtual

Exploring protein sequences and functional annotations with UniProt

Webinar Virtual

Preparation of genomics libraries for an emerging next-gen sequencing platform

John Baeten, Vladimir Benes, Björn Textor, Pingfang Liu, Laura Villacorta

John Baeten, Vladimir Benes, Björn Textor, Pingfang Liu, Laura Villacorta Course EMBL Heidelberg

Solution scattering from biological macromolecules

Melissa Gräwert, Clement Blanchet

Melissa Gräwert, Clement Blanchet Course Virtual, EMBL Hamburg

Managing a bioinformatics core facility

Juanita Riveros

Juanita Riveros Course EMBL-EBI

How to make your research open with Europe PMC

Webinar Virtual

Multiscale model of the different modes of invasion: a PhysiBoSS application

Marco Ruscone

Marco Ruscone Webinar Virtual

The mobile genome: genetic and physiological impacts of transposable elements

Déborah Bourc’his, Julius Brennecke, Jose L. Garcia-Perez, Susan Wessler

Déborah Bourc’his, Julius Brennecke, Jose L. Garcia-Perez, Susan Wessler Conference EMBL Heidelberg, Virtual

Exploring protein families and domains using InterPro

Webinar Virtual

Hands-on flow cytometry: learning by doing!

Daniel Gimenes, Diana Ordonez, Steffen Schmitt

Daniel Gimenes, Diana Ordonez, Steffen Schmitt Course EMBL Heidelberg

Cancer genomics

Isidro Cortes Ciriano, Christina Curtis, Nuria Lopez-Bigas, Young Seok Ju

Isidro Cortes Ciriano, Christina Curtis, Nuria Lopez-Bigas, Young Seok Ju Conference EMBL Heidelberg, Virtual

Complex Portal: from proteins to complexes

Webinar Virtual

Programmatic access to UniProt using Python

Webinar Virtual

25th EMBL PhD Symposium

2023 EMBL PhD Symposium Organising Committee

2023 EMBL PhD Symposium Organising Committee Conference EMBL Heidelberg

Genome bioinformatics: from short- to long-read sequencing

Sophie Spencer

Sophie Spencer Course EMBL-EBI

Accessing single cell transcriptome data with the Human Cell Atlas Data Portal

Webinar Virtual

Exploring EMBL-EBI sequence analysis tools and managing bioinformatics workflows

Ajay Mishra

Ajay Mishra Course Virtual

Subcortical sensory circuits: visual, auditory, somatosensory, and beyond

Hiroki Asari, Martha Bickford, Carl Petersen, Santiago Rompani

Hiroki Asari, Martha Bickford, Carl Petersen, Santiago Rompani Conference EMBL Heidelberg, Virtual

Studying metabolites and small molecules with MetaboLights and ChEBI

Webinar Virtual

Interpreting the effects of genetic variants on protein structure and function

Meredith Willmott

Meredith Willmott Course Virtual

Fundamentals of widefield and confocal microscopy and imaging

Heiko Gaethje, Stefan Marawske, Jens Marquardt, Stefan Terjung

Heiko Gaethje, Stefan Marawske, Jens Marquardt, Stefan Terjung Course EMBL Heidelberg

Computational structural biology

Jan Kosinski, Rommie Amaro, Christine Orengo, Sameer Velankar

Jan Kosinski, Rommie Amaro, Christine Orengo, Sameer Velankar Conference EMBL Heidelberg, Virtual

From transcriptomics to mechanistic models of signalling

Daniel V. Thomas Lopez

Daniel V. Thomas Lopez Course Virtual

Uncovering protein function with UniProt

Webinar Virtual

An introduction to EMBL-EBI resources

Webinar Virtual

Automated annotation in UniProt

Webinar Virtual

Exploratory analysis of biological data: data carpentry

Renato Alves, Lisanna Paladin, Fotis E. Psomopoulos, Christian Schudoma

Renato Alves, Lisanna Paladin, Fotis E. Psomopoulos, Christian Schudoma Course EMBL Heidelberg, Virtual

Exploring target-disease associations with the Open Targets Platform’s new interface

Webinar Virtual

Analysis and integration of transcriptome and proteome data

Vladimir Benes, Raffaele Calogero, Jeroen Krijgsveld, Lennard Martens

Vladimir Benes, Raffaele Calogero, Jeroen Krijgsveld, Lennard Martens Course EMBL Heidelberg

Sequence analysis tools in UniProt: BLAST and Align

Webinar Virtual

Introduction to RNA-seq and functional interpretation

Juanita Riveros

Juanita Riveros Course Virtual

Investigating microbial ecology in extreme habitats

Webinar Virtual

Exploring gene and environmental exposure interactions to understand human health and disease

Sophie Spencer

Sophie Spencer Course EMBL-EBI

The new cardiobiology

Pilar Alcaide, Johannes Backs, Tina Haase, Enzo Porrello

Pilar Alcaide, Johannes Backs, Tina Haase, Enzo Porrello Conference EMBL Heidelberg, Virtual

Integrative analysis of multi-omics data

Wolfgang Huber, Oliver Stegle, Britta Velten

Wolfgang Huber, Oliver Stegle, Britta Velten Course EMBL Heidelberg

Exploring metagenomes to assess microbiomes across the globe

Webinar Virtual

UniProt for proteomics scientists

Webinar Virtual

Introduction to multi-omics data integration and visualisation

Meredith Willmott

Meredith Willmott Course EMBL-EBI

Gene expression at spatial resolution

Vladimir Benes, Dirk Jürgensen, Elisabeth Zielonka

Vladimir Benes, Dirk Jürgensen, Elisabeth Zielonka Course EMBL Heidelberg

Bioinformatic approaches to understand the role of the human microbiome in health and disease

Webinar Virtual

Mathematics of life: modelling molecular mechanisms

Juanita Riveros

Juanita Riveros Course Virtual

AI and biology

Mohammed AlQuraishi, Wolfgang Huber, Anna Kreshuk, Emma Lundberg, Oliver Stegle

Mohammed AlQuraishi, Wolfgang Huber, Anna Kreshuk, Emma Lundberg, Oliver Stegle Conference EMBL Heidelberg, Virtual

Strain-resolved approaches for human microbiome studies

Webinar Virtual

Livestock genomics

Sophie Spencer

Sophie Spencer Course Virtual

Biological oscillators: rhythms and synchronisation across scales

Alexander Aulehla, Alan Hastings, Hanspeter Herzel, Carrie Partch

Alexander Aulehla, Alan Hastings, Hanspeter Herzel, Carrie Partch Conference EMBL Heidelberg, Virtual

Protein quality control for downstream processes

Karine Lapouge, Kim Remans, Bertrand Raynal

Karine Lapouge, Kim Remans, Bertrand Raynal Course EMBL Heidelberg

Metabarcoding and data sharing for environmental DNA

Ajay Mishra

Ajay Mishra Course Virtual

Microbial biodiversity at schools and its link with children’s health

Webinar Virtual

The Pathogens Portal: A gateway to vast biomolecular data for pathogen research

Webinar Virtual

Explore Human Pangenome Reference Consortium (HPRC) data in Ensembl

Webinar Virtual

Data-driven approaches to understanding dementia

Juanita Riveros

Juanita Riveros Course EMBL-EBI

scATAC-seq: attacking open chromatin in single cells

Vladimir Benes, Ulrike Litzenburger, Judith Zaugg

Vladimir Benes, Ulrike Litzenburger, Judith Zaugg Course EMBL Heidelberg

Diversity of plants: from genomes to metabolism

Barbara Ann Halkier, Sarah E. O’Connor, Detlef Weigel

Barbara Ann Halkier, Sarah E. O’Connor, Detlef Weigel Conference EMBL Heidelberg, Virtual

Curating proteins involved in Antimicrobial Resistance (AMR) in UniProt

Webinar Virtual

The mechanics of life: from development to disease

Prisca Liberali, Nicoletta Petridou, Amy Shyer, Andela Saric, Xavier Trepat

Prisca Liberali, Nicoletta Petridou, Amy Shyer, Andela Saric, Xavier Trepat Conference EMBL Heidelberg, Virtual

Ultrastructure expansion microscopy

Niccolo Banterle, Gautam Dey, Paul Guichard, Virginie Hamel, Marine Laporte

Niccolo Banterle, Gautam Dey, Paul Guichard, Virginie Hamel, Marine Laporte Course EMBL Heidelberg

Computational Biology Training in Hematology 2024, Module 1

Sophie Spencer

Sophie Spencer Course EMBL-EBI

Statistical thinking for microbial ecology

Webinar Virtual

Microscopy data analysis: machine learning and the BioImage Archive

Meredith Willmott

Meredith Willmott Course Virtual

Fundamentals of widefield and confocal microscopy and imaging

Heiko Gaethje, Jens Marquard

Heiko Gaethje, Jens Marquard Course EMBL Heidelberg

Organismal physiology

Gerard Karsenty, Irene Miguel-Aliaga, Asya Rolls, Miguel Soares

Gerard Karsenty, Irene Miguel-Aliaga, Asya Rolls, Miguel Soares Conference EMBL Heidelberg, Virtual

Introduction to the Ensembl Bacteria genome browser

Webinar Virtual

Harmony in diversity: exploring the rich microbiomes of South American wildlife

Webinar Virtual

Building networks 2024: engineering in vascular biology

Maria Bernabeu, Claudio Franco, Stephan Huveneers, Milica Radisic

Maria Bernabeu, Claudio Franco, Stephan Huveneers, Milica Radisic Conference EMBL Barcelona

Open Virtual Ensembl Browser Workshop

Aleena Mushtaq

Aleena Mushtaq Course Virtual

Wine yeasts as a model system in community ecology

Webinar Virtual

Exploring human disease and protein variant data in UniProtKB

Webinar Virtual

Advanced fluorescence imaging techniques

Manuel Gunkel, Aliaksandr Halavatyi, Debora Keller-Olivier Joana Delgado Martins, Irina Rakotoson

Manuel Gunkel, Aliaksandr Halavatyi, Debora Keller-Olivier Joana Delgado Martins, Irina Rakotoson Course EMBL Heidelberg

Cellular mechanisms driven by phase separation

Simon Alberti, Sara Cuylen-Häring, Dorothee Dormann, Alex Holehouse

Simon Alberti, Sara Cuylen-Häring, Dorothee Dormann, Alex Holehouse Conference EMBL Heidelberg, Virtual

Introduction to metabolomics analysis

Meredith Willmott

Meredith Willmott Course EMBL-EBI

Open Virtual Ensembl REST API Workshop

Louisse Paola Mirabueno

Louisse Paola Mirabueno Course Virtual

Accessing sequence analysis tools via the new Job Dispatcher website

Webinar Virtual

BioMalPar XX: biology and pathology of the malaria parasite

Sabrina Absalon, Jess Bryant, Fredros Okumu, Taco Kooij

Sabrina Absalon, Jess Bryant, Fredros Okumu, Taco Kooij Conference EMBL Heidelberg, Virtual

Interpreting the effects of genetic variants on protein structure and function

Meredith Willmott

Meredith Willmott Course Virtual

Whole transcriptome data analysis

Marco Beccuti, Vladimir Benes, Raffaele Calogero, Francesca Cordero

Marco Beccuti, Vladimir Benes, Raffaele Calogero, Francesca Cordero Course EMBL Heidelberg

Structural characterisation of macromolecular complexes

Ana Casanal, Wojciech Galej, Eva Kowalinski, Carlo Petosa, Montserrat Soler López

Ana Casanal, Wojciech Galej, Eva Kowalinski, Carlo Petosa, Montserrat Soler López Course EMBL Grenoble

Microtubules: from atoms to complex systems

Carsten Janke, Thomas Müller-Reichert, Shinsuke Niwa, Kassandra Ori-Mckenney

Carsten Janke, Thomas Müller-Reichert, Shinsuke Niwa, Kassandra Ori-Mckenney Conference EMBL Heidelberg, Virtual

AlphaMissense predictions for human genetic variation research

Webinar Virtual

C. elegans: from genome editing to imaging

Henrik Bringmann, Simone Koehler, Georgia Rapti, Pavak Shah

Henrik Bringmann, Simone Koehler, Georgia Rapti, Pavak Shah Course EMBL Heidelberg

Systems biology: from large datasets to biological insight

Juanita Riveros

Juanita Riveros Course EMBL-EBI

Summer school in bioinformatics

Barbara Etzi

Barbara Etzi Course EMBL-EBI

Innate immunity in host-pathogen interactions

Gordon Brown, Michaela Gack, Felix Randow, Dominique Soldati-Favre, Cyril Zipfel

Gordon Brown, Michaela Gack, Felix Randow, Dominique Soldati-Favre, Cyril Zipfel Conference EMBL Heidelberg, Virtual

Cancer genomics and transcriptomics

Meredith Willmott

Meredith Willmott Course Virtual

Data visualisation principles for enhancing effective scientific communication

Webinar Virtual

Bioinformatics for immunologists

Juanita Riveros

Juanita Riveros Course EMBL-EBI

From atoms to ecosystems – a new era in life sciences

Rolf Apweiler, Elena Conti, Anne Ephrussi, Eileen Furlong, Cornelius Gross, Rainer Pepperkok, Pavel Tomancak, Nassos Typas

Rolf Apweiler, Elena Conti, Anne Ephrussi, Eileen Furlong, Cornelius Gross, Rainer Pepperkok, Pavel Tomancak, Nassos Typas Conference EMBL Heidelberg, Virtual

Ensembl Browser Workshop, Cenicafe

Marco Aurelio Cristancho Ardila 

Marco Aurelio Cristancho Ardila Course Other

Time-resolved macromolecular serial crystallography

Oskar Aurelius, Shibom Basu, Gisela Brändé, Arwen Pearson, Daniele de Sanctis

Oskar Aurelius, Shibom Basu, Gisela Brändé, Arwen Pearson, Daniele de Sanctis Course EMBL Grenoble

Time-resolved STED nanoscopy in life sciences

Marko Lampe, Andrea Mülter, Manuel Gunkel, Julia Roberti

Marko Lampe, Andrea Mülter, Manuel Gunkel, Julia Roberti Course EMBL Heidelberg

Hands-on Arthropod Bioinformatics Workshop

Gloria I. Giraldo-Calderón

Gloria I. Giraldo-Calderón Course Other

Proteomics bioinformatics

Barbara Etzi

Barbara Etzi Course EMBL-EBI

Advances in cryo-electron microscopy and 3D image processing

Julia Mahamid, Sebastian Eustermann, Simone Mattei, Lori Passmore, Henning Stahlberg

Julia Mahamid, Sebastian Eustermann, Simone Mattei, Lori Passmore, Henning Stahlberg Course sb, tim, cbb Structural Biology Technology, Imaging and Methods Cell Biology and Biophysics EMBL Heidelberg

Transcription and chromatin

Shelley Berger, Eileen Furlong, Luca Giorgetti, Jürg Müller

Shelley Berger, Eileen Furlong, Luca Giorgetti, Jürg Müller Conference EMBL Heidelberg, Virtual

Current methods in cell biology

Niccolò Banterle, Beth Cimini, Simone Koehler

Niccolò Banterle, Beth Cimini, Simone Koehler Course EMBL Heidelberg

Genome engineering: CRISPR/Cas in cells and mice

Neil Humphreys, Kristof Kersse, Birgit Koch, Elisabeth Zielonka

Neil Humphreys, Kristof Kersse, Birgit Koch, Elisabeth Zielonka Course EMBL Heidelberg

Imaging mouse development

Jan Ellenberg, Kate McDole, Isabel Espinosa Medina, Robert Prevedel, Shankar Srinivas

Jan Ellenberg, Kate McDole, Isabel Espinosa Medina, Robert Prevedel, Shankar Srinivas Conference EMBL Heidelberg, Virtual

Chemical biology 2024

Yimon Aye, Bryan Dickinson, Maja Köhn

Yimon Aye, Bryan Dickinson, Maja Köhn Conference EMBL Heidelberg, Virtual

Membrane protein expression, purification, and characterisation 3 (mPEPC3)

Maria Garcia Alai, Simon Mortensen, Kim Remans, Henning Tidow

Maria Garcia Alai, Simon Mortensen, Kim Remans, Henning Tidow Course EMBL Hamburg

Technological advances and computational approaches for spatially-resolved transcriptomics

Webinar Virtual

Synthetic biology in action: engineering synthetic systems

Sven Panke, Vitor Pinheiro, Karen Polizzi, Nico Claassens, Velia Siciliano

Sven Panke, Vitor Pinheiro, Karen Polizzi, Nico Claassens, Velia Siciliano Course EMBL Heidelberg, Virtual

Reconstructing the human past: using ancient and modern genomics

Johannes Krause, Ida Moltke, Maanasa Raghavan, Pontus Skoglund

Johannes Krause, Ida Moltke, Maanasa Raghavan, Pontus Skoglund Conference EMBL Heidelberg, Virtual

Inferring cell-cell communication through spatial transcriptomics data

Webinar Virtual

Metagenomics bioinformatics at MGnify

Meredith Willmott

Meredith Willmott Course Virtual

Single-cell RNA-seq analysis with Python

Juanita Riveros

Juanita Riveros Course Virtual

Developing data infrastructures and analytical systems for spatial omics

Webinar Virtual

Defining and defeating metastasis

Eduard Batlle, Johanna Joyce, Daniel Klimmeck, Joan Massagué, Samra Turajlic

Eduard Batlle, Johanna Joyce, Daniel Klimmeck, Joan Massagué, Samra Turajlic Conference EMBL Heidelberg, Virtual

Computational Biology Training in Hematology 2024, Module 2

Barbara Etzi

Barbara Etzi Course EMBL Heidelberg

Building a spatial transcriptomics platform

Webinar Virtual

Molecular mechanisms in evolution and ecology

Gilles Fischer, Jordi van Gestel, Kimberley Kline, Sara Mitri, Antonis Rokas

Gilles Fischer, Jordi van Gestel, Kimberley Kline, Sara Mitri, Antonis Rokas Conference EMBL Heidelberg, Virtual

Visualising integrated single cell and spatial transcriptomics datasets

Webinar Virtual

A guide to UniProt for students

Webinar Virtual

Metabolite and species dynamics in microbial communities

Sunil Laxman, Kiran Patil, Elisabeth Zielonka, Maria Zimmermann-Kogadeeva

Sunil Laxman, Kiran Patil, Elisabeth Zielonka, Maria Zimmermann-Kogadeeva Course EMBL Heidelberg, Other

The complex life of RNA

Elena Conti, Olivier Duss, Torben Heick Jensen, Karla Neugebauer

Elena Conti, Olivier Duss, Torben Heick Jensen, Karla Neugebauer Conference EMBL Heidelberg, Virtual

Spatial multi-omics integration: metabolites meet RNA

Webinar Virtual

Imaging down to single-molecule resolution: STED & MINFLUX nanoscopy

Clara Gürth, Charlotte Kaplan, Marko Lampe, Ulf Matti, Julia Menzel, Sebastian Schnorrenberg

Clara Gürth, Charlotte Kaplan, Marko Lampe, Ulf Matti, Julia Menzel, Sebastian Schnorrenberg Course EMBL Heidelberg

I made my code open - now what? Steps to a thriving open software project

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Managing a bioinformatics core facility

Barbara Etzi

Barbara Etzi Course EMBL-EBI

Programmatic access to UniProt using Python

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Structural bioinformatics

Juanita Riveros

Juanita Riveros Course Virtual

The fundamentals of high-end cell sorting

Beata Ramasz, Diana Ordonez

Beata Ramasz, Diana Ordonez Course EMBL Heidelberg

DNA replication: from basic biology to disease

Anja Groth, Thanos Halazonetis, Helle Ulrich

Anja Groth, Thanos Halazonetis, Helle Ulrich Conference EMBL Heidelberg, Virtual

A guide to Job Dispatcher sequence analysis tools and programmatic access

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MGnify Proteins: a new resource of 2.5 billion proteins for exploring metagenomics sequence space

Webinar Virtual

The next generation in infection biology

Maria Bernabeu, Jan Kosinski, Eva Kowalinski, John Lees, Lizette de Paula, Nassos Typas

Maria Bernabeu, Jan Kosinski, Eva Kowalinski, John Lees, Lizette de Paula, Nassos Typas Conference Virtual

Humanized mice: immunotherapy and regenerative medicine

Christian Münz, Estefanía Rodríguez, Jan Jacob Schuringa, Leonard Shultz, Brian Soper, Renata Stripecke

Christian Münz, Estefanía Rodríguez, Jan Jacob Schuringa, Leonard Shultz, Brian Soper, Renata Stripecke Course EMBL Heidelberg

Integrative structural biology: solving molecular puzzles

Arjen Jakobi, Jan Kosinski, Maya Topf

Arjen Jakobi, Jan Kosinski, Maya Topf Course EMBL Hamburg

Genome bioinformatics: from short- to long-read sequencing

Meredith Willmott

Meredith Willmott Course EMBL-EBI

Plant genomes: from data to discovery

Barbara Etzi

Barbara Etzi Course Virtual

Quantitative biology to molecular mechanisms

Lacramioara Bintu, Hartland Jackson, Arnaud Krebs, Tineke Lenstra, Mikhail Savitski

Lacramioara Bintu, Hartland Jackson, Arnaud Krebs, Tineke Lenstra, Mikhail Savitski Conference EMBL Heidelberg, Virtual

Investigating gene function and human disease through data on the IMPC portal

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Navigating patent data with SureChEMBL

Webinar Virtual

Small molecule chemistry: from proteins to pathways

Juanita Riveros

Juanita Riveros Course Virtual

Hands-on course for sample preparation and data analysis in proteomics

Mandy Rettel, Mikhail Savitski, Frank Stein

Mandy Rettel, Mikhail Savitski, Frank Stein Course EMBL Heidelberg

Calculating polygenic scores with the Polygenic Score Catalog Calculator

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Uncovering protein function with UniProt

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Primer for predocs 2025

Juanita Riveros

Juanita Riveros Course EMBL-EBI

An introduction to EMBL-EBI resources

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Computing skills for reproducible research: software carpentry

Renato Alves, Lisanna Paladin, Christian Schudoma

Renato Alves, Lisanna Paladin, Christian Schudoma Course EMBL Heidelberg, Virtual

Introducing the new Ensembl Genome Browser

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Automated annotation in UniProt

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In situ structural biology: expanding the toolbox for structural cell biology

Julia Mahamid, Jonas Ries, Stefano Vanni

Julia Mahamid, Jonas Ries, Stefano Vanni Conference cbb, sb, tim Cell Biology and Biophysics Structural Biology Technology, Imaging and Methods EMBL Heidelberg, Virtual

Explore small molecules in the PDB easily using PDBe-KB Ligand Pages

Webinar Virtual

In situ CLEM at room temperature and in cryo

Ori Avinoam, Mandy Bormel, Rachel Mellwig

Ori Avinoam, Mandy Bormel, Rachel Mellwig Course cbb, sb, tim Cell Biology and Biophysics Structural Biology Technology, Imaging and Methods EMBL Heidelberg

Sequence analysis tools in UniProt: BLAST and Align

Webinar Virtual

Single-cell RNA-seq analysis with Python

Juanita Riveros

Juanita Riveros Course Virtual

Advanced deep learning for image analysis

Anna Kreshuk, Florian Jug, Constantin Pape, Martin Weigert

Anna Kreshuk, Florian Jug, Constantin Pape, Martin Weigert Course EMBL Heidelberg

Extracellular vesicles: from biology to biomedical applications

An Hendrix, Cecilia Lässer, Esther Nolte-T Hoen, Guillaume Van Niel

An Hendrix, Cecilia Lässer, Esther Nolte-T Hoen, Guillaume Van Niel Course EMBL Heidelberg

Introduction to RNA-seq and functional interpretation

Barbara Etzi

Barbara Etzi Course Virtual

Basics of Large Language Models - transformers to LLMs

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Workshop on Artificial Intelligence Competencies: training challenges and needs of research infrastructures and core facilities

Juanita Riveros

Juanita Riveros Course EMBL-EBI

Introduction to multi-omics data integration and visualisation

Meredith Willmott

Meredith Willmott Course EMBL-EBI

Developing a dataset for LLM projects

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UniProt for proteomics scientists

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Quantitative proteomics: strategies and tools to probe biology

Jeroen Krijgsveld, Christina Ludwig, Mikhail Savitski

Jeroen Krijgsveld, Christina Ludwig, Mikhail Savitski Course EMBL Heidelberg

The expanding world of RBPs: from posttranscriptional control to riboregulation

Francesca Cuttruzola, Imed Gallouzi, Matthias Hentze, V. Narry Kim

Francesca Cuttruzola, Imed Gallouzi, Matthias Hentze, V. Narry Kim Conference EMBL Heidelberg, Virtual

Gene-environment interactions in human health and disease

Juanita Riveros

Juanita Riveros Course EMBL-EBI

Mechanisms of drug resistance and tolerance in bacteria, fungi, and cancer

Judith Berman, Markus Ralser, Luiz Carvalho, Marina Rodnina

Judith Berman, Markus Ralser, Luiz Carvalho, Marina Rodnina Conference EMBL Heidelberg, Virtual

LLM generated summaries for protein classification at InterPro

Webinar Virtual

Measuring translational dynamics by ribosome profiling

Pasha Baranov, Jan Medenbach, Sebastian Leidel, Elisabeth Zielonka

Pasha Baranov, Jan Medenbach, Sebastian Leidel, Elisabeth Zielonka Course EMBL Heidelberg

BioChatter and the future of LLM driven bioscience

Webinar Virtual

Microscopy data analysis: machine learning and the BioImage Archive

Anca Belu

Anca Belu Course Virtual

AI in one health

Oliver Billker, Lionel Christiaen, Anna Kreshuk, Giancarlo Russo, Sameer Velankar, Qi Zhang

Oliver Billker, Lionel Christiaen, Anna Kreshuk, Giancarlo Russo, Sameer Velankar, Qi Zhang Conference EMBL Heidelberg

Domain-specific knowledge extraction from scientific texts using LLMs

Webinar Virtual

Microbial metagenomics: a 360º approach

Vladimir Benes, Giuseppe D´Auria, José Eduardo González-Pastor, Elisabeth Zielonka

Vladimir Benes, Giuseppe D´Auria, José Eduardo González-Pastor, Elisabeth Zielonka Course EMBL Heidelberg

Wild frontiers of model organisms

Susana Coelho, Gautam Dey, Michael Dorrity, Nicole Dubilier, Flora Vincent

Susana Coelho, Gautam Dey, Michael Dorrity, Nicole Dubilier, Flora Vincent Conference EMBL Heidelberg, Virtual

Exploring Human Disease and Protein Variant Data in UniProtKB and Contextualising Variation with ProtVar

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LLMs in bioinformatics Q&A session

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From variant to drug target: using the expanded Open Targets Platform to explore the genetics of target discovery

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Sustainable research: fit for the future

Brendan Rouse, Marta Rodríguez-Martínez, Philipp Weber, Martin Farley, Valeria Scagliotti

Brendan Rouse, Marta Rodríguez-Martínez, Philipp Weber, Martin Farley, Valeria Scagliotti Conference EMBL Heidelberg, Virtual

Analysis and integration of transcriptome and proteome data

Vladimir Benes, Raffaele Calogero, Daria Fijalkowska, Jeroen Krijgsveld, Lennard Martens

Vladimir Benes, Raffaele Calogero, Daria Fijalkowska, Jeroen Krijgsveld, Lennard Martens Course EMBL Heidelberg

Theory and concepts in biology

Alexander Aulehla, Christina Hueschen, Jordi Garcia-Ojalvo, Sriram Ramaswamy, Kirsty Wan

Alexander Aulehla, Christina Hueschen, Jordi Garcia-Ojalvo, Sriram Ramaswamy, Kirsty Wan Conference EMBL Heidelberg, Virtual

Navigating UniProt: a brief overview and recent updates

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Cancer genomics and transcriptomics

Anca Belu

Anca Belu Course Virtual

Chromatin and epigenetics

Asifa Akhtar, Amanda Fisher, Dirk Schubeler, Bing Ren

Asifa Akhtar, Amanda Fisher, Dirk Schubeler, Bing Ren Conference EMBL Heidelberg, Virtual

Principles of research data management

Webinar Virtual

Advanced fluorescence imaging techniques

Manuel Gunkel, Aliaksandr Halavatyi, Joana Delgado Martins, Stefan Marawske

Manuel Gunkel, Aliaksandr Halavatyi, Joana Delgado Martins, Stefan Marawske Course EMBL Heidelberg

Introduction to metabolomics analysis

Juanita Riveros

Juanita Riveros Course EMBL-EBI

BioMalPar XXI: biology and pathology of the malaria parasite

Yaw Aniweh, Liliana Mancio-Silva, Wiebke Nahrendorf, Stuart Ralph

Yaw Aniweh, Liliana Mancio-Silva, Wiebke Nahrendorf, Stuart Ralph Conference EMBL Heidelberg, Virtual

Mastering data management: Go FAIR, Go Open, Go Smart — EMO BON and TREC showcases

Webinar Virtual

Infection: pathogens, hosts, and microbiomes

Maria Bernabeu, Pascale Cossart, Hiten Madhani, Kim Orth, Michael Way

Maria Bernabeu, Pascale Cossart, Hiten Madhani, Kim Orth, Michael Way Conference EMBL Heidelberg, Virtual

Towards open and standardised imaging data: an introduction to Bio-Formats, OME-TIFF, and OME-Zarr

Webinar Virtual

Whole transcriptome data analysis

Marco Beccuti, Vladimir Benes, Raffaele Calogero, Francesca Cordero

Marco Beccuti, Vladimir Benes, Raffaele Calogero, Francesca Cordero Course EMBL Heidelberg

25th international meeting of the European Light Microscopy Initiative

Elisa D’Este, Ulrike Engel, Elisa May, Rainer Pepperkok, Stefan Terjung, Timo Job Kristian Zimmermann

Elisa D’Este, Ulrike Engel, Elisa May, Rainer Pepperkok, Stefan Terjung, Timo Job Kristian Zimmermann Conference tim, dab, cbb Technology, Imaging and Methods Data Analysis and Bioinformatics Cell Biology and Biophysics EMBL Heidelberg, Virtual

Data management in a bioimage informatics data flow

Webinar Virtual

From sequences to structures: Protein characterisation using EMBL-EBI APIs

Barbara Etzi

Barbara Etzi Course Virtual

The ageing genome: from mechanisms to disease

George Garinis, Jaqueline Jacobs, Björn Schumacher, Agnel Sfeir

George Garinis, Jaqueline Jacobs, Björn Schumacher, Agnel Sfeir Conference EMBL Heidelberg, Virtual

A FAIR and scalable workflow for plankton phenogenomics at single cell level

Webinar Virtual

Computational modelling of multicellular systems

Katie Bentley, James Sharpe, Alejandro Torres-Sanchez

Katie Bentley, James Sharpe, Alejandro Torres-Sanchez Course EMBL Barcelona

Imaging-based spatial-omics

Alvaro Crevenna, Andrea Radtke, Emerald Perlas, Sinem Saka,

Alvaro Crevenna, Andrea Radtke, Emerald Perlas, Sinem Saka, Course EMBL Heidelberg

In science we trust?

Flavien Affaki, Sandra Bendiscioli, Thomas Keane, Bernd Pulverer, Giorgia Renne, Lucia von Bredow

Flavien Affaki, Sandra Bendiscioli, Thomas Keane, Bernd Pulverer, Giorgia Renne, Lucia von Bredow Conference EMBL Heidelberg

Data science for life scientists

Meredith Willmott

Meredith Willmott Course EMBL-EBI

Data visualisation for biology

Anca Belu

Anca Belu Course EMBL-EBI

New approaches and concepts in microbiology

Pascale Cossart, Sophie Helaine, KC Huang, Michael Laub, Nassos Typas

Pascale Cossart, Sophie Helaine, KC Huang, Michael Laub, Nassos Typas Conference EMBL Heidelberg, Virtual

Open FAIR data: the role of public data archives

Webinar Virtual

Transitions in developing systems: from theory to experiments

Karen Alim, James Briscoe, Jordi van Gestel, Nicoletta Petridou, Hanh Vu

Karen Alim, James Briscoe, Jordi van Gestel, Nicoletta Petridou, Hanh Vu Course EMBL Heidelberg

A journey to FAIR bioimage data

Webinar Virtual

Systems biology: from large datasets to biological insight

Juanita Riveros

Juanita Riveros Course EMBL-EBI

Exploring macromolecular protein assemblies and their visualisation with Complex Portal

Webinar Virtual

Proteomics bioinformatics

Barbara Etzi

Barbara Etzi Course EMBL-EBI

Fluorescence imaging beyond intensity

Luis Alvarez, Manuel Gunkel, Andrea Mülter

Luis Alvarez, Manuel Gunkel, Andrea Mülter Course EMBL Heidelberg

Gene regulation: one molecule at a time

Stirling Churchman, Arnaud Krebs, Mounia Lagha, Daniel Larson

Stirling Churchman, Arnaud Krebs, Mounia Lagha, Daniel Larson Conference EMBL Heidelberg, Virtual

Deploying Nextflow pipelines in the cloud: a practical introduction

Webinar Virtual

Drosophila genetics and genomics

Justin Crocker, Kate O’Connor-Giles, Ella Preger-Ben Noon, Andreas Prokop

Justin Crocker, Kate O’Connor-Giles, Ella Preger-Ben Noon, Andreas Prokop Course EMBL Heidelberg

FISHing for RNAs: classical to single molecule approaches

Florence Besse, Imre Gaspar, Emerald Perlas, Elisabeth Zielonka

Florence Besse, Imre Gaspar, Emerald Perlas, Elisabeth Zielonka Course cbb, gbtt, tim Cell Biology and Biophysics Genome Biology, Transcription and Translation Technology, Imaging and Methods EMBL Heidelberg

Protein synthesis and translational control

Alfredo Castello, Christopher Fraser, Fatima Gebauer, Christian Spahn

Alfredo Castello, Christopher Fraser, Fatima Gebauer, Christian Spahn Conference EMBL Heidelberg, Virtual

ChEMBL workshop for drug design

Webinar Virtual

Developmental metabolism: flows of energy, matter, and information

Alexander Aulehla, Heather Christofk, Heidi Lempradl, Jonathan Rodenfels

Alexander Aulehla, Heather Christofk, Heidi Lempradl, Jonathan Rodenfels Conference EMBL Heidelberg, Virtual

Advanced methods in bioimage analysis

Ignacio Arganda-Carreras, Anna Klemm, Perrine Paul-Gilloteaux, Christian Tischer

Ignacio Arganda-Carreras, Anna Klemm, Perrine Paul-Gilloteaux, Christian Tischer Course EMBL Heidelberg, Virtual

Methods for infectious disease modelling using genomics

Barbara Etzi

Barbara Etzi Course EMBL-EBI

The human microbiome

Mani Arumugam, Ami Bhatt, Peer Bork, Nicola Segata

Mani Arumugam, Ami Bhatt, Peer Bork, Nicola Segata Conference EMBL Heidelberg, Virtual

CANCELLED: NicE-RNA sequencing for multiomics on open chromatin and transcription

Vladimir Benes, Björn Textor

Vladimir Benes, Björn Textor Course EMBL Heidelberg

A life in science: farewell symposium for Anne Ephrussi

Alexander Aulehla, Jürgen Deka, Edith Heard

Alexander Aulehla, Jürgen Deka, Edith Heard Conference EMBL Heidelberg

Introduction to pangenomes and why they are worth exploring

Webinar Virtual

A guide to UniProt for students

Webinar Virtual

Metagenomics bioinformatics at MGnify

EMBL-EBI Training

EMBL-EBI Training Course EMBL-EBI

Seeing is believing: imaging the molecular processes of life

Jan Ellenberg, Jennifer Lippincott-Schwartz, Satyajit Mayor, Atsushi Miyawaki

Jan Ellenberg, Jennifer Lippincott-Schwartz, Satyajit Mayor, Atsushi Miyawaki Conference EMBL Heidelberg, Virtual

Evolution of the accessory genome

Webinar Virtual

Liquid biopsies

Anders Ståhlberg, Martin Dalin

Anders Ståhlberg, Martin Dalin Course EMBL Heidelberg

Spatial biology: the melting pot

Sean Bendall, Leeat Keren, Arutha Kulasinghe, Sinem Saka, Denis Schapiro

Sean Bendall, Leeat Keren, Arutha Kulasinghe, Sinem Saka, Denis Schapiro Conference EMBL Heidelberg, Virtual

Inferring bacterial pangenomes with gene-based approaches

Webinar Virtual

The BiotrAIn project: opportunities from Latin America

Webinar Virtual

Organoids: modelling organ development and disease in 3D

Meritxell Huch, Karl R. Koehler, Madeline Lancaster, Esther Schnapp

Meritxell Huch, Karl R. Koehler, Madeline Lancaster, Esther Schnapp Conference EMBL Heidelberg, Virtual

Making sense of massive genomic data by indexing at scale

Webinar Virtual

Redefining UniProt reference proteomes and upcoming changes in UniProtKB

Webinar Virtual

Structural bioinformatics

Juanita Riveros

Juanita Riveros Course Virtual

The epitranscriptome

Michaela Frye, Tsutomiu Suzuki, Chengqi Yi

Michaela Frye, Tsutomiu Suzuki, Chengqi Yi Conference EMBL Heidelberg, Virtual

The mobile genome: genetic and physiological impacts of transposable elements

Deborah Bourc'his, Josefa Gonzalez Perez, Joseph Peters, Julius Brennecke

Deborah Bourc'his, Josefa Gonzalez Perez, Joseph Peters, Julius Brennecke Conference EMBL Heidelberg, Virtual

Artificial intelligence, machine learning and AlphaFold in research: experiences from Latin America

Webinar Virtual

Pangenome graphs as a new paradigm in comparative genomics

Webinar Virtual

Hands-on flow cytometry: learning by doing!

Daniel Gimenes, Diana Ordonez, Steffen Schmitt

Daniel Gimenes, Diana Ordonez, Steffen Schmitt Course cbb, mi, tim Cell Biology and Biophysics Microbiology and Immunology Technology, Imaging and Methods EMBL Heidelberg

Cancer genomics

Kathleen Burns, Isidro Cortés-Ciriano, Mariam Jamal-Hanjani, Young Seok Ju

Kathleen Burns, Isidro Cortés-Ciriano, Mariam Jamal-Hanjani, Young Seok Ju Conference EMBL Heidelberg, Virtual

Artificial intelligence in biomedical science in Argentina

Webinar Virtual

Pangenome annotations and resources in Ensembl

Webinar Virtual

Chemicals in a biological context: metabolites, drugs, and beyond

Juanita Riveros

Juanita Riveros Course Virtual

Evaluating variant effects in human proteins with ProtVar

Webinar Virtual

Genome bioinformatics: from short- to long-read sequencing

Anca Belu

Anca Belu Course EMBL-EBI

Solution scattering from biological macromolecules

Clement Blanchet, Melissa Gräwert, Tobias Gräwert, Annette Langkilde

Clement Blanchet, Melissa Gräwert, Tobias Gräwert, Annette Langkilde Course EMBL Hamburg, Virtual

Cell biology of the nucleus

Simone Koehler, Patrick Lusk, Thomas Quail, Sara Wickström

Simone Koehler, Patrick Lusk, Thomas Quail, Sara Wickström Conference EMBL Heidelberg, Virtual

Artificial intelligence for exploring and understanding microbiomes

Webinar Virtual

Accessing UniProt programmatically for students

Webinar Virtual

Volume electron microscopy by automated serial SEM

Christel Genoud, Amanda Lewis, Paolo Ronchi, Yannick Schwab

Christel Genoud, Amanda Lewis, Paolo Ronchi, Yannick Schwab Course EMBL Heidelberg

27th EMBL PhD Symposium

2025 EMBL PhD Symposium Organising Committee

2025 EMBL PhD Symposium Organising Committee Conference EMBL Heidelberg, Virtual

From RNA to the field: artificial intelligence applications in bioinformatics and agriculture in Argentina

Webinar Virtual

Computational structural biology

Rommie Amaro, Charlotte Deane, Jan Kosinski, Christine Orengo, Sameer Velankar

Rommie Amaro, Charlotte Deane, Jan Kosinski, Christine Orengo, Sameer Velankar Conference dab, sb, tim Data Analysis and Bioinformatics Structural Biology Technology, Imaging and Methods EMBL Heidelberg, Virtual

Exploring molecular interactions in-depth across species

Webinar Virtual

Genome engineering: CRISPR/Cas in cells and mice

Silke Deckert, Neil Humphreys, Kristof Kersse, Birgit Koch, Elisabeth Zielonka

Silke Deckert, Neil Humphreys, Kristof Kersse, Birgit Koch, Elisabeth Zielonka Course EMBL Heidelberg

Managing a bioinformatics core facility

EMBL-EBI Training

EMBL-EBI Training Course EMBL-EBI