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Glycolytic activity instructs germ layer proportions through regulation of Nodal and Wnt signaling.
Cell stem cell, 2025
doi:10.1016/j.stem.2025.03.011.
Three Decades of the Spanish Society for Developmental Biology (SEBD): Insights and Emerging Perspectives from the 18th Spanish Society for Developmental Biology Meeting (SEBD 2024).
The International journal of developmental biology, 2025
doi:10.1387/ijdb.250034sa.
Early autonomous patterning of the anteroposterior axis in gastruloids.
Development (Cambridge, England), 2024
doi:10.1242/dev.202171.
The people behind the papers - Kerim Anlaş and Vikas Trivedi.
Development (Cambridge, England), 2024
doi:10.1242/dev.204481.
Mapping morphogenesis and mechanics in embryo models.
Nature methods, 2023
doi:10.1038/s41592-023-02079-4.
Metabolic control of germ layer proportions through regulation of Nodal and Wnt signalling.
bioRxiv, 2023
doi:10.1101/2023.12.04.569862.
Local cellular interactions during the self-organization of stem cells.
Current Opinion in Cell Biology, 2023
doi:10.1016/j.ceb.2023.102261.
Single-cell Bayesian deconvolution.
iScience, 2023
doi:10.1016/j.isci.2023.107941.
A stem cell zoo uncovers intracellular scaling of developmental tempo across mammals.
Cell Stem Cell, 2023
doi:10.1016/j.stem.2023.05.014.
Understanding the interplay of membrane trafficking, cell surface mechanics, and stem cell differentiation.
Seminars in cell & developmental biology, 2022
doi:10.1016/j.semcdb.2022.05.010.
Arrested coalescence of multicellular aggregates.
Soft matter, 2022
doi:10.1039/d2sm00063f.
Periodic formation of epithelial somites from human pluripotent stem cells.
Nature communications, 2022
doi:10.1038/s41467-022-29967-1.
Sculpting tissues by phase transitions.
Nature communications, 2022
doi:10.1038/s41467-022-28151-9.
Sculpting with stem cells: how models of embryo development take shape.
Development (Cambridge, England), 2021
doi:10.1242/dev.192914.
linus: conveniently explore, share, and present large-scale biological trajectory data in a web browser.
PLoS computational biology, 2021
doi:10.1371/journal.pcbi.1009503.
MOrgAna: accessible quantitative analysis of organoids with machine learning.
Development (Cambridge, England), 2021
doi:10.1242/dev.199611.
Studying evolution of the primary body axis in vivo and in vitro.
eLife, 2021
doi:10.7554/eLife.69066.
Dynamics of anteroposterior axis establishment in a mammalian embryo-like system.
2021
doi:10.1101/2021.02.24.432766.
Gastruloids: embryonic organoids from mouse embryonic stem cells to study patterning and development in early mammalian embryos.
Methods in molecular biology (Clifton, N.J.), 2020
doi:10.1007/978-1-0716-1174-6_10.
Rethinking embryology in vitro: a synergy between engineering, data science and theory.
Developmental biology, 2020
doi:10.1016/j.ydbio.2020.10.013.
Imaging the beating heart with macroscopic phase stamping.
2020
doi:https://arxiv.org/abs/2011.01688.
Self-organised symmetry breaking in zebrafish reveals feedback from morphogenesis to pattern formation.
2019
doi:https://doi.org/10.1101/769257.
Tissue 'melting' sculpts embryo.
Nature, 2018
doi:10.1038/d41586-018-06108-7.
Multidimensional quantitative analysis of mRNA expression within intact vertebrate embryos.
Development (Cambridge, England), 2018
doi:10.1242/dev.156869.
Anteroposterior polarity and elongation in the absence of extra-embryonic tissues and of spatially localised signalling in gastruloids: mammalian embryonic organoids.
Development (Cambridge, England), 2017
doi:10.1242/dev.150391.
Hyperspectral phasor analysis enables multiplexed 5D in vivo imaging.
Nature methods, 2017
doi:10.1038/nmeth.4134.
Spatio-Temporal Differences in Dystrophin Dynamics at mRNA and Protein Levels Revealed by a Novel FlipTrap Line.
PloS one, 2015
doi:10.1371/journal.pone.0128944.
Dynamic structure and protein expression of the live embryonic heart captured by 2-photon light sheet microscopy and retrospective registration.
Biomedical optics express, 2015
doi:10.1364/BOE.6.002056.
Dynamic imaging of the growth plate cartilage reveals multiple contributors to skeletal morphogenesis.
Nature communications, 2015
doi:10.1038/ncomms7798.
Localizing transcripts to single cells suggests an important role of uncultured deltaproteobacteria in the termite gut hydrogen economy.
Proceedings of the National Academy of Sciences of the United States of America, 2013
doi:10.1073/pnas.1307876110.