Nicolas Altemose
Stanford University
USA
EMBL Conference
This conference will take place at EMBL Heidelberg, with the option to attend virtually.
Gene expression is controlled by the dynamic action of dozens of macromolecular complexes that assemble on DNA to transcribe genes and translate mRNAs to proteins. Understanding of these mechanisms has historically been driven by biochemical and structural characterisation of the players, as well as probing their function through genetic deletions. The genomics revolution has provided us with a near- comprehensive picture of where these factors bind to regulate the genome and which transcripts are processed in various biological contexts.
A key limitation of the resulting models is that they are derived using data that are static by nature, unfaithfully representing the dynamics of these regulatory processes in vivo. The last few years has seen the independent emergence of microscopy and genomics technologies to monitor gene regulation processes with single molecule resolution. Recording the dynamic function of regulatory proteins on DNA and RNA now opens opportunities to understand key parameters of the process such as its kinetics, or how various activities are combined in vivo.
This meeting will bring together pioneers of the single molecule microscopy and single molecule genomics field, as well as theoretical biologists to catalyze the emergence of a new generation of mechanistic models of the regulation of genes across each steps of the central dogma.
Stanford University
USA
Institute of Human Genetics
France
Stanford University
USA
University of California, Santa Cruz
USA
Friedrich Miescher Institute for Biomedical Research
Switzerland
Caltech
USA
Harvard University
USA
Max Planck Institute of Immunobiology and Epigenetics
Germany
University of California, Berkeley
USA
Stanford University
USA
Max Planck Institute of Immunobiology and Epigenetics
Germany
University of Oxford
UK
Institut de Génétique Moléculaire de Montpellier
France
Netherlands Cancer Institute
The Netherlands
National Institute of Genetics
Japan
University of California San Francisco
USA
Wiymann Institute
Israel
Harvard Medical School
USA
EMBL Heidelberg
Germany
Institut de Génétique Moléculaire de Montpellier
France
Center for Cancer Research National Cancer Institute Bethesda
USA
EMBL Heidelberg
Germany
Are you on social media? Post using #EMBLGeneRegulation and don’t forget to tag @EMBLEvents.
Time (Europe/Berlin) | Speaker |
---|---|
12:00 – 13:30 | Registration and light refreshments |
13:30 – 13:45 | Opening remarks by scientific organisers |
13:45 – 16:35 | Session 1: RNA processing and translation |
13:45 – 14:05 | Regulation of transcription and translation in early development (Single molecule microscopy) Mounia Lagha – Institut de Génétique Moléculaire de Montpellier, France |
14:05 – 14:25 | mRNA processing and translation (Single molecule microscopy) Jeff Chao – Friedrich Miescher Institute for Biomedical Research, Switzerland |
14:25 – 14:45 | Selected short talk #1 |
14:45 – 15:05 | Selected short talk #2 |
15:05 – 15:35 | Coffee Break and Meet the speakers |
15:35 – 15:55 | mRNA processing (Single molecule genomics) Valerie Hilgers – Max Planck Institute of Immunobiology and Epigenetics, Germany |
15:55 – 16:15 | Selected short talk #3 |
16:15 – 16:35 | Selected short talk #4 |
16:35 – 17:35 | Speed networking |
17:35 – 19:00 | Dinner in EMBL Canteen |
19:00 – 21:00 | After dinner drinks in ATC rooftop lounge |
Time (Europe/Berlin) | Speaker |
---|---|
09:00 – 11:50 | Session 2: Chromatin regulation |
09:00 – 09:20 | Chromatin organization (Single molecule microscopy) Kazuhiro Maeshima – National Institute of Genetics, Japan |
09:20 – 09:40 | Selected short talk #5 |
09:40 – 10:00 | Selected short talk #6 |
10:00 – 10:30 | Coffee Break and Meet the speakers |
10:30 – 10:50 | Selected short talk #7 |
10:50 – 11:10 | Selected short talk #8 |
11:10 – 11:30 | Single molecule chromatin regulation (Single molecule genomics) Efrat Shema – Weizmann Institute, Israel |
11:30 – 11:50 | Selected short talk #9 |
11:50 – 13:50 | Lunch with guided walk and run in the woods |
13:50 – 16:05 | Session 3: Transcription regulation |
13:50 – 14:10 | Chromatin and transcription regulation (Single molecule genomics) William Greenleaf – Stanford University, USA |
14:10 – 14:30 | Selected short talk #10 |
14:30 – 14:50 | Role of disordered protein domains in transcription (Single molecule microscopy) Sash Chong – Caltech, USA |
14:50 – 15:20 | Coffee Break and Meet the speakers |
15:20 – 15:40 | Role of disordered protein domains in transcription (Single molecule microscopy) Sash Chong – Caltech, USA |
15:40 – 16:00 | Regulation of transcription kinetics (Theory) Hernan Garcia – University of California, Berkeley, USA |
16:00 – 16:20 | Selected short talk #11 |
16:20 – 16:50 | Flash talk session 1 |
16:50 – 18:50 | Poster Session 1 (odd numbers) |
18:50 – 20:20 | Dinner in EMBL Canteen |
20:20 | Free evening with option of informal networking in downtown Heidelberg |
Time (Europe/Berlin) | Speaker |
---|---|
09:00 – 11:50 | Session 4: Transcription regulation |
09:00 – 09:20 | Chromatin organization (Single molecule genomics) Vijay Ramani – University of California, San Francisco, USA |
09:20 – 09:40 | Selected short talk #12 |
09:40 – 10:00 | Selected short talk #13 |
10:00 – 10:30 | Coffee Break and Meet the speakers |
10:30 – 10:50 | HIV transcription regulation (Single molecule microscopy) Edouard Bertrand – Institute of Human Genetics, France |
10:50 – 11:10 | Selected short talk #14 |
11:10 – 11:30 | Theoretical models of gene regulation process (Theory) Hinrich Boeger – University of California, Santa Cruz, USA |
11:30 – 11:50 | Selected short talk #15 |
11:50 – 13:50 | Lunch and 3 focus panel discussions of 45 minutes discussing the future of the field |
13:50 -15:55 | Session 5: Chromatin regulation |
13:50 – 14:10 | Chromatin regulation at centromeres (Single molecule genomics) Nicolas Altemose – Stanford University, USA |
14:10 – 14:30 | Selected short talk #16 |
14:30 – 14:50 | Synthetic single molecule genomics (Single molecule genomics) Lacra Bintu – Stanford University, USA |
14:50 – 15:20 | Coffee Break and Meet the Editors |
15:20 – 15:40 | Epigenetic control of transcription (Single molecule microscopy) Rob Klose – University of Oxford, UK |
15:40 – 16:00 | Selected short talk #17 |
16:00 – 16:30 | Flash talk session 2 |
16:30 – 18:30 | Poster Session 2 (even numbers) |
18:30 – 20:30 | Conference dinner in the EMBL Canteen |
20:30 – 24:00 | Conference party |
Time (Europe/Berlin) | Speaker |
---|---|
09:30 – 12:05 | Session 6: Transcription regulation |
09:30 – 09:50 | Chromatin and transcription regulation (Single molecule genomics) Stirling Churchman – Harvard University, USA |
09:50 – 10:10 | Selected short talk #18 |
10:10 – 10:30 | Regulation of transcription kinetics (Single molecule microscopy) Tineke Lenstra – Netherlands Cancer Institute, Netherlands |
10:30 – 11:00 | Coffee Break and Meet the speakers |
11:00 – 11:20 | Selected short talk #19 |
11:20 – 11:40 | Selected short talk #20 |
11:40 – 12:00 | Phase separation and transcription regulation (Single molecule microscopy) Ibrahim Cisse – Max Planck Institute of Immunobiology and Epigenetics, Germany |
12:00 – 12:15 | Closing Remarks and Poster Prize Announcements |
12:15 | Packed lunch and departure |
On-site registration fees include admission, conference materials, meals and coffee breaks. Participants are expected to book and pay their own accommodation and travel expenses.
Virtual registration fees include access to all of the talks (livestreamed and on demand) and facility to submit questions.
On-site Academia | €800 |
On-site PhD Student | €700 |
On-site Industry | €1000 |
On-site Journal Editors* | €300 |
Virtual Academia | €225 |
Virtual PhD Student | €175 |
Virtual Industry | €275 |
* Editors from scientific journals are allowed to attend at a reduced rate, but asked to contribute to the conference in return by taking part in ‘meet the editors’ sessions or other planned activities within the programme.
A letter to support your visa application will be issued, on request, once payment of the registration fee is confirmed. We recommend that you book your visa appointment as soon as possible, to avoid any delay with your visa application.
Accredited journalists may be eligible to register for complimentary press registration. Registrants may be required to provide accreditation or equivalent proof of press membership after registration. Please contact Inna Bösselmann for more information. Please note that we do not offer complimentary registrations for editors of scientific journals.
Registration will be on a first come, first served basis. Your place can only be confirmed after payment of the registration fee. If you are added to our waiting list, please consider taking advantage of our offerings to participate virtually.
On-site participants: Types of payments accepted are international bank transfers and credit card payments.
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Only participants registering to attend the on-site event are eligible to submit an abstract. Abstracts will not be accepted from virtual participants.
After registration you can submit your abstract via a separate link that will be provided in the email confirmation. Alternatively, you can access the link on the confirmation page directly after registering. The same login credentials are used for both processes.
Please note:
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Presentation types: When submitting your abstract, you can apply for an oral or poster presentation. A selection process will take place with the results announced 2-3 weeks after the abstract submission deadline.
For detailed instructions on how to submit a conference abstract, follow the instructions provided in this video.
Please check our FAQs pages for further information on how to submit an abstract.
Limited financial assistance is provided by the EMBL Advanced Training Centre Corporate Partnership Programme and EMBO in the form of registration fee waivers, travel grants, and childcare grants.
Your place in the meeting is only confirmed by paying the registration fee, which is mandatory even when receiving a fee waiver.
The fee waiver will cover the registration sum that you have paid to attend the course or conference.
The travel grant will cover the cost of travel to an on-site event (airfare, train, bus, taxi, accommodation, visa, and/or registration fees*) and is provided up to specified caps which are normally as follows:
–up to €400 for participants travelling to an EMBL Conference or EMBO|EMBL Symposium from within Europe.
–up to €1000 for participants travelling to an EMBL Conference or EMBO|EMBL Symposium from outside Europe.
–up to €500 for any participant travelling to an EMBO Workshop.
–up to €1000 for any participant working in Chile, India, Singapore or Taiwan travelling to an EMBO Workshop.
–up to €700 for any participant working in Croatia, Czech Republic, Estonia, Greece, Hungary, Italy, Lithuania, Luxembourg, Poland, Slovenia, and Turkey travelling to an EMBO Workshop.
*Registration fees are only covered for EMBO Workshops
The organisers may reduce the grant cap to accommodate more participants. Recipients will be notified of their travel cap amount when they are informed of the outcome of their application. Original receipts must be provided with your signature for all costs incurred within two months of completion of travel. Scanned copies cannot be accepted.
There is the possibility to apply for a childcare grant to offset child care costs incurred by participants, speakers, and organisers when attending a conference.
Eligible costs include (but are not limited to) fees for a baby-sitter or child-care facility, and travel costs for a caregiver. Please note that priority will be given to early stage researchers. In order to apply for this grant, you must be registered by the abstract submission deadline. There is a limited amount of funding available for the childcare grants and funds will be distributed amongst eligible applicants.
On-site participants
You may apply for financial assistance when submitting your abstract. In your application you will be asked to answer questions regarding why your lab cannot fund your attendance and how your attendance will make a difference to your career. Application for financial support will not affect the outcome of your registration application.
Virtual participants
If you are attending virtually, you can apply for financial assistance in the submission portal by the abstract deadline. Read the instructions on how to apply for financial assistance. Only submissions for financial assistance will be accepted. Presentation abstracts cannot be submitted here and will be declined.
In your application you will be asked to summarise your current work, answer questions regarding why your lab cannot fund your attendance, and how your attendance will make a difference to your career. Application for financial support will not affect the outcome of your registration application.
The scientific organisers will select the recipients of registration fee waivers and travel grants during the motivation letter or abstract selection process. Results will be announced approximately 6 – 8 weeks before the event start date, however for some events this may be delayed. Selection results do not impact your admission to the meeting. Selection for registration fee waivers and travel grants is based on scientific merit, your current work or study location, the reasons for needing financial support, and the impact this event will have on your career.
Childcare grants will be allocated in the same timeframe (6-8 weeks before the event start date). Please note that priority will be given to early-stage researchers.
Costs will be reimbursed after the meeting only once a reimbursement form and original receipts (from travel costs) have been received.
View our list of external funding opportunities and information on attending a conference as an event reporter.
For further information about financial assistance please refer to the FAQ page.
Accommodation is not included in the conference registration fee.
The hotels below have rooms on hold for participants until 17 June 2025, in some cases at special rates. Please email the hotel directly, quoting the booking code GRG25-01 to confirm the exact price of the room.
For travel information, please see here.
If you are travelling to the conference within Germany then you are eligible for the Deutsche Bahn ‘Event Ticket’ (called the ‘Veranstaltungsticket’ in German). This will result in a lower ticket price if your travel distance to Heidelberg is more than 100 km. You need to provide proof of your event attendance when purchasing the ticket.
For more information in English see here or in German see here.
You can book your ticket here.
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Address: EMBL, Meyerhofstraße 1, 69117 Heidelberg, Germany.
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Hello | Hallo |
Goodbye | Auf Wiedersehen (formal) Tschüss (informal) |
Good morning | Guten Morgen |
Good afternoon | Guten Tag |
Good evening | Guten Abend |
Good night | Gute Nacht |
I’m sorry | Es tut mir leid |
Excuse me… | Entschuldigen Sie |
How are you? | Wie gehts? |
I’m fine thanks. And you? | Mir geht es gut , danke. Und Dir/Ihnen? |
What is your name | Wie heißen Sie? (formal) Wie heißt Du? (informal) |
My name is | Ich heiße… |
Do you speak English | Sprechen Sie englisch? |
I don’t understand | Ich verstehe nicht |
Please speak more slowly | Können Sie bitte langsamer sprechen |
Thank you | Dankeschön |
Where is the toilet? | Wo ist die Toilette? |
Please call me a taxi | Bitte rufen Sie mir ein Taxi |
How do I get to….? | Wie komme ich zum/zur…..? |
A beer/two beers please | Ein Bier/zwei Bier bitte |
A glass of red/white wine please | Ein Glas Rot/Weisswein bitte |
The menu, please | Die Speisekarte, bitte |
Is there a local speciality? | Gibt es eine Spezialität aus dieser Gegend? |
I’m vegetarian | Ich bin Vegetarier |
It was delicious | Es war hervorragend |
The bill, please | Die Rechnung, bitte |
I have a headache | Ich habe Kopfschmerzen |
I have a sore throat | Ich habe Halsschmerzen |
My stomach hurts | Ich habe Magenschmerzen |
I’m allergic to | Ich bin allergisch gegen |
I need a doctor who speaks English | Ich brauche einen Arzt, der englisch spricht |
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Date: 15 - 18 Jul 2025
Location: EMBL Heidelberg and Virtual
Venue: EMBL Advanced Training Centre
Deadline(s):
Abstract submission: 8 Apr 2025
Registration (On-site): 3 Jun 2025
Registration (Virtual): 8 Jul 2025
Organisers:
Contact: Inna Bösselmann