Cancer genomics – Course and Conference Office

EMBL Conference

Cancer genomics


This conference will take place at EMBL Heidelberg, with the option to attend virtually.

Conference overview

This meeting will provide an opportunity to learn about and keep up to date with the rapidly progressing area of cancer genomics. We aim to bring together scientists from across several disciplines connected with cancer research, for a unique opportunity to interact and stimulate further integration of these efforts.

Highlights include talks from our keynotes Rebecca Fitzgerald (University of Cambridge, UK), Jan Korbel (EMBL Heidelberg, Germany), and 20 other great speakers.

Session topics

  • Mutation and clonal selection
  • Cancer evolution
  • Cancer genome medicine
  • Emerging technologies in cancer genomics
  • Genomic instability and mutational processes
  • Cancer ecosystems and micro-environment

What past participants say about the conference

We have had excellent feedback on our past meetings, where participating scientists specifically enjoyed the high quality of research presented which included ample presentation of unpublished data, and the ability to interact with each other in this small to medium-sized conference setting.

Excellent conference, with good talks, both from early stage and senior researchers. Great opportunity to broadcast my work to experts in the field, and to find potential scientific collaborators.” – Isabel Duarte, CINTESIS UAlg, Portugal

The EMBL Cancer Genomics conference perfectly synthesized scientific and technical innovation guided by leading scientists in the field. Great experience!” – Mila Gugnoni, Laboratory of Translational Research AUSL – IRCCS Reggio Emilia, Italy

Please see EMBL’s COVID-19 safety recommendations if attending the on-site event.


Keynote Speakers

Invited speakers

Mariam Jamal-Hanjani

UCL Cancer Institute


Kamila Naxerova

Kamila Naxerova

Harvard Medical School


Andrea Sottoriva

Human Technopole


Oliver Stegle

EMBL Heidelberg


Scientific Organisers

Isidro Cortes Ciriano.

Isidro Cortes Ciriano



Christina Curtis

Christina Curtis

Stanford University


Núria López-Bigas

Núria López-Bigas

Institute for Research in Biomedicine


Young Seok Ju

Korea Advanced Institute of Science and Technology (KAIST)

Republic of Korea

Conference Organiser

Chris Stocks

Chris Stocks

EMBL Heidelberg



Got something to say? Tweet it! #EMBLCanGen

  • Please note that the programme is subject to change. Some speakers may need to join virtually to give their talk.
  • For registered participants, recorded talks will be accessible on demand for 2 weeks after the end of the event, unless indicated otherwise.
Day 1 – Wednesday 15 November 2023
Time (Europe/Berlin)Speaker
10:30 – 12:00 Registration and light refreshments
10:45 – 11:45Pre-conference workshopSingle Cell Genomics at scale: Unlock single-cell workflows with combinatorial indexing” by Scale Biosciences (registration required)
12:00 – 12:15Opening remarks
12:15 – 13:00Keynote lecture: Harnessing cancer evolution for clinical benefit: lessons from the oesophagus
Rebeca Fitzgerald – University of Cambridge, UK
Session 1: Mutation & clonal selection
Chairs: Jan Korbel – EMBL Heidelberg, Germany
Anna Poetsch – TU Dresden, Germany
13:00 – 13:25Mechanisms and evolutionary trajectories of complex genome rearrangements in cancer
Isidro Cortes Ciriano – EMBL-EBI, UK
Live stream only
13:25 – 13:40Evolutionary dynamics of large-scale DNA copy number alterations in patient-derived adenoma organoids
Thomas van Ravesteyn – Hubrecht Institute, The Netherlands
13:40 – 13:55Selective pressures of platinum compounds shape the evolution of therapy-related myeloid neoplasms
Jurrian de Kanter – Princess Máxima Center for Pediatric Oncology and Oncode Institute, The Netherlands
13:55 – 14:20Reconstructing the embryology of childhood cancer from somatic mutations
Sam Behjati – Wellcome Sanger Institute, UK
14:20 – 14:35Accurate de novo detection of somatic mutations in single-cell genomics and transcriptomics data
Francesc Muyas – EMBL-EBI, UK
14:35 – 14:50Sperm sequencing reveals extensive positive selection in the human germline
Matthew Neville – Wellcome Sanger Institute, UK
Live stream only
14:50 – 15:05Single-mitosis dissection of acute and chronic DNA mutagenesis and repair
Paul Ginno – German Cancer Research Center (DKFZ), Germany
15:05 – 15:35Coffee break & meet the speakers
15:35 – 17:35Session 2: Cancer Evolution
Chairs: Núria López-Bigas – ICREA and Institute for Research in Biomedicine Barcelona (IRB Barcelona), Spain
Craig Anderson – MRC Institute of Genetics and Cancer, UK
15:35 – 16:00On the evolutionary history of metastatic cancer
Kamila Naxerova – Harvard Medical School, USA
16:00 – 16:15The origin and evolution of pediatric secondary neoplasms
Abel Gonzalez-Perez – Institute for Research in Biomedicine Barcelona (IRB Barcelona), Spain
16:15 – 16:40Darwinian epigenetic evolution and non-Darwinian cellular plasticity in colorectal cancer
Andrea Sottoriva – Technopole, Italy
16:40 – 16:55Methylation dynamics in the decades preceding Acute Myeloid Leukaemia
Adriana Fonseca – University of Cambridge, UK
16:55 – 17:10Inferring genomic trajectory of uveal melanoma
Chang Hyun Nam – Korea Advanced Institute of Science and Technology, Republic of Korea
17:10 – 17:35Tumor evolution: a real-time and single-cell perspective
Hugo Snippert – University Medical Center Utrecht, The Netherlands
Live stream only
17:35 – 18:05Flash talks
#57 Andersen, Laura #61 Arnedo-Pac, Claudia #122 Leppä, Aino-Maija #135 McCullough, Marcel #141 Nicholson, Michael #143 Paassen, Irene #149 Pham, My #49 Poetsch, Anna #151 Przybilla, Moritz #163 Rueda, Bertha #171 Selway-Clarke, Hugh #173 Sibai, Mustafa #89 Supek, Fran #59 Taylor, Martin #187 Trinh, Mi #195 von Berg, Joanna #199 Wang, Yichen #201 Wenger, Anna #207 Yong, Hanting
18:05 – 19:35Poster session 1 (odd numbers)
View poster listing here
19:35 – 21:00Dinner in Canteen
21:00 – 22:30Drinks & Networking
Day 2 – Thursday 16 November 2023
Time (Europe/Berlin)Speaker
Session 3: Cancer Genome Medicine
Young seok Ju – Korea Advanced Institute of Science and technology
Carolin Sauer – EMBL-EBI, UK
09:15 – 09:40Convergence of machine learning and genomics for precision cancer medicine
Eliezer Van Allen – Harvard Medical School, USA
09:40 – 09:55Saturation mutational scanning uncovers druggability of all FGFR kinase point mutations
Carla Schmidt – University of Freiburg and German Cancer Consortium (DKTK), Germany
09:55 – 10:20Understanding cancer biology through multi-omics genotype-phenotype tumour maps: applications in rare cancers
Lynnette Fernandez Cuesta – IARC, France
Matthieu Foll – IARC, France
10:20 – 10:35Genomic analysis of skin cancers from Xeroderma Pigmentosum subgroups revealed new mechanisms of UV mutagenesis
Sergey Nikolaev – Gustave Roussy Cancer Campus, France
10:35 – 11:00Coffee break & meet the speakers
11:00 – 11:25Genesis of uterine leiomyomas; lessons from a benign neoplasm
Lauri Aaltonen – University of Helsinki, Finland
11:25 – 11:40Somatic xeroderma pigmentosum group D (XPD) mutations alter local and global landscape of mutational processes in bladder cancer
Jayne Barbour – The University of Hong Kong, Hong Kong
11:40 – 12:05The genomic and transcriptomic profile of melanoma in Latin American patients
Carla Daniela Robles-Espinoza – Universidad Nacional Autónoma de México, Mexico
12:05 – 13:30Meet the speakers and lunch
Session 4: Emerging technologies in cancer genomics
Chairs: Isidro Cortes Ciriano – EMBL-EBI, UK
Claudia Arnedo-Pac – University of Cambridge, UK
13:30 – 13:55Clonal selection in normal tissues and its relation to cancer risk
Núria López-Bigas – ICREA and Institute for Research in Biomedicine Barcelona (IRB Barcelona), Spain
13:55 – 14:20Genomic landscapes of pre-malignant lesions in stomach cancer
Patrick Tan – Duke-NUS Medical School, Singapore
14:20 – 14:35Cancer patient-derived organoids dependency map
Carmen Herranz-Ors – Wellcome Sanger Institute, UK
14:35 – 15:00Charting the regulatory landscape of tumors using single-cell sequencing and spatial omics
Oliver Stegle – EMBL Heidelberg, Germany
15:00 – 15:15Single-strand mismatch and damage patterns in cancer and cancer-predisposition syndromes revealed by single-molecule DNA sequencing
Gilad Evrony – New York University Grossman School of Medicine, USA
15:15 – 16:10Coffee break & meet the speakers
Session 5: Genomic instability & mutational processes
Chairs: Martin Taylor – University of Edinburgh, UK
Axel Rosendahl Huber – Institute for Research in Biomedicine Barcelona (IRB Barcelona), Spain
16:10 – 16:35Extrachromosomal DNA in cancer
Anton Henssen – Charité University Medicine Berlin; Max Delbrück Center for Molecular Medicine, Germany
16:35 – 17:00Chromothripsis in cancer
Aurélie Ernst – German Cancer Research Center (DKFZ), Germany
17:00 – 17:30Flash talks
#52 Aitken, Sarah #116 Kjær, Asbjørn #130 Mäkinen, Netta #134 McClellan, Michael #136 McNamara, Megan #148 Pensch, Raphaela #150 Poon, Yeuk Pin Gladys #160 Rodriguez Fos, Elias #198 Wang, Evan #176 Zavadil, Jiri
17:30 – 19:00Poster session 2 (even numbers)
View poster listing here
19:00 – 21:00Conference dinner
21:00 – 00:00Live band: The Chaotics – ATC Foyer
Day 3 – Friday 17 November 2023
Time (Europe/Berlin)Speaker
Session 5 continued: Genomic instability & mutational processes
Chairs: Martin Taylor – University of Edinburgh, UK
Axel Rosendahl Huber – Institute for Research in Biomedicine Barcelona (IRB Barcelona), Spain
09:00 – 09:25Exploring the role of retrotransposons in tumorigenesis, antigenicity, and genomic instability
E. Alice Lee – Harvard University, USA
09:25 – 09:40Geographic variation of mutagenic exposures in kidney cancer genomes
Sarah Moody – Wellcome Sanger Institute, UK
09:40 – 10:05Impact of chromatin architecture on somatic mutational processes
Sabarinathan Radhakrishnan – National Centre for Biological Sciences, India
10:05 – 10:20CpG>TpG mutagenesis: DNA polymerase errors as a new culprit of an old crime
Marketa Tomkova – University of Oxford, UK
10:20 – 10:50Coffee break & meet the speakers
10:50 – 11:15Forecasting oncogene amplication
Geoff Macintyre – Spanish National Cancer Research Center (CNIO), Spain
11:15 – 11:30Single-cell evaluation of DNA damage in neonatal hematopoietic cells after prenatal exposure to chemotherapy
Ilana Struys – KU Leuven, Belgium
11:30 – 11:45Mutation risk redistribution in cancer genomes linked to alterations in cell cycle genes
Marina Salvadores Ferreiro – Institute for Research in Biomedicine Barcelona (IRB Barcelona), Spain
Live stream only
11:45 – 12:00Mechanisms of APOBEC3 mutagenesis in human cancer cells
Mia Petljak – NYU Grossman School of Medicine, USA
Live stream only
12:00 – 13:00Meet the speakers and lunch
Session 6: Cancer ecosystems & microenvironment
Chairs: Sarah Aitken- University of Cambridge, UK
Maria Andrianova – Institute for Research in Biomedicine, Spain
13:00 – 13:25Widespread somatic L1 retrotransposition in normal colorectal epithelium
Young Seok Ju – Korea Advanced Institute of Science and Technology, Republic of Korea
13:25 – 13:40Homopolymer on/off switches mediate adaptive mutability in mismatch repair-deficient colorectal cancer
Marnix Jansen – UCL Cancer Institute, UK
13:40 – 14:05Insights into lung cancer evolution and metastases in TRACERx and PEACE
Mariam Jamal-Hanjani – UCL Cancer Institute, UK
**This talk is now virtual**
14:05 – 14:50Keynote lecture: Deciphering cancer and aging using
haplotype-resolved single-cell genomic sequencing

Jan Korbel – EMBL Heidelberg, Germany
Live stream only
14:50 – 15:00Closing Remarks and Poster Prize

Practical information

Registration fees and abstract submission

On-site registration fees include admission, conference materials, meals and coffee breaks. Participants are expected to book and pay their own accommodation and travel expenses.

Virtual registration fees include access to all of the talks (livestreamed and on demand) and facility to submit questions.

On-site Academia€710
On-site PhD Student€610
On-site Industry€910
Virtual Academia€200
Virtual PhD Student€150
Virtual Industry€250

A letter to support your visa application will be issued, on request, once payment of the registration fee is confirmed. We recommend that you book your visa appointment as soon as possible, to avoid any delay with your visa application.

Accredited journalists may be eligible to register for complimentary press registration. Registrants may be required to provide accreditation or equivalent proof of press membership after registration. Please contact christopher.stocks@embl.de for more information. Please note that we do not offer complimentary registrations for editors of scientific journals.

Confirmation and payment

Registration will be on a first come, first served basis. Your place can only be confirmed after payment of the registration fee. If you are added to our waiting list, please consider taking advantage of our offerings to participate virtually.

On-site participants: Types of payments accepted are international bank transfers and credit card payments. 

Virtual participants: We are only able to accept card payments. In exceptional cases we can accept bank transfers. Please contact events@embl.de for details.

Abstract submission

Only participants registering to attend the on-site event are eligible to submit an abstract. Abstracts will not be accepted from virtual participants.

After registration you can submit your abstract via a separate link that will be provided in the email confirmation. Alternatively, you can access the link on the confirmation page directly after registering. The same login credentials are used for both processes.

Please note:

Abstract body: The limit of 2000 characters refers to manually typed text and excludes spaces. If an error occurs try using a different web browser (preferably Google Chrome or Mozilla Firefox).

If you copy-paste the text into the form, hidden formatting might still be included which may cause the text to exceed the 2,000 character limit resulting in an error message. We recommend you clear all formatting before pasting in the text.

If you have special symbols in your text, make sure you are using Unicode characters, otherwise these will not be recognised.

Title: The title should not exceed 20 words. Only the first word of the title should start with a capital letter and the rest should be lowercase.

Authors and affiliations: Please fill in the author’s details as requested in the online form. The compulsory fields are: First Name, Last Name, Organisation Name (Affiliation or Company), Country and Email.

Kindly mark only one author in the role of First Author and please don’t forget to indicate who will be the Presenter.

Please enter your co-authors correctly via the system by adding accounts together with their organisation/institute. Do not copy-paste them into the body of the abstract text, as they will not be indexed in the abstract book.

Presentation types: When submitting your abstract, you can apply for an oral or poster presentation. A selection process will take place with the results announced 2-3 weeks after the abstract submission deadline.

For detailed instructions on how to submit a conference abstract, follow the instructions provided in this video.

Please check our FAQs pages for further information on how to submit an abstract.

Financial assistance

Limited financial assistance is provided by the EMBL Advanced Training Centre Corporate Partnership Programme and EMBO in the form of both registration fee waivers and travel grants. These are available for on-site participants at EMBL Conferences and EMBO|EMBL Symposia, and for on-site and virtual participants at EMBO Workshops. We are currently working on securing funding for all virtual participants, and ask that you please apply for financial assistance for both on-site and virtual participation. 

Financial assistance

Your place in the meeting is only confirmed by paying the registration fee, which is mandatory even when receiving a fee waiver.

Registration fee waiver

The fee waiver will cover the registration sum that you have paid to attend the course or conference.

Travel grant

The travel grant will cover the cost of travel to an on-site event (airfare, train, bus, taxi, accommodation, visa, and/or registration fees*) and is provided up to specified caps which are normally as follows:

–up to €400 for participants travelling to an EMBL Conference or EMBO|EMBL Symposium from within Europe.

–up to €1000 for participants travelling to an EMBL Conference or EMBO|EMBL Symposium from outside Europe.

–up to €500 for any participant travelling to an EMBO Workshop.

–up to €1000 for any participant working in Chile, India, Singapore or Taiwan travelling to an EMBO Workshop.

–up to €700 for any participant working in Croatia, Czech Republic, Estonia, Greece, Hungary, Italy, Lithuania, Luxembourg, Poland, Slovenia, and Turkey travelling to an EMBO Workshop.

*Registration fees are only covered for EMBO Workshops

The organisers may reduce the grant cap to accommodate more participants. Recipients will be notified of their travel cap amount when they are informed of the outcome of their application. Original receipts must be provided with your signature for all costs incurred within two months of completion of travel. Scanned copies cannot be accepted.

Childcare grant (EMBO Workshops only)

For EMBO Workshop participants with children, there is the possibility to apply for a childcare grant to offset child care costs incurred by participants or speakers when participating at a conference. Eligible costs include fees for a baby-sitter or child-care facility, travel costs for a caregiver, or travel costs for taking the child to the meeting etc. Please note that priority will be given to early stage researchers. A maximum amount of €500 can be awarded per participant applying for an EMBO childcare grant. In order to apply for this grant for EMBO Workshops, you must be registered by the abstract submission deadline.


On-site participants

You may apply for financial assistance when submitting your abstract. In your application you will be asked to answer questions regarding why your lab cannot fund your attendance and how your attendance will make a difference to your career. Application for financial support will not affect the outcome of your registration application.

Virtual participants

If you are attending virtually, you can apply for financial assistance in the submission portal by the abstract deadline. Read the instructions on how to apply for financial assistance. Only submissions for financial assistance will be accepted. Presentation abstracts cannot be submitted here and will be declined. 

In your application you will be asked to summarise your current work,  answer questions regarding why your lab cannot fund your attendance, and how your attendance will make a difference to your career. Application for financial support will not affect the outcome of your registration application.


The scientific organisers will select the recipients of all financial assistance during the abstract selection process. Results will be announced approximately 6 – 8 weeks before the event start date, however for some events this may be delayed. Selection results do not impact your admission to the meeting. Selection is based on scientific merit, your current work or study location, the reasons for needing financial support, and the impact this event will have on your career.


Costs will be reimbursed after the meeting only once a reimbursement form and original receipts (from travel costs) have been received.

Further details

View our list of external funding opportunities and information on attending a conference as an event reporter.

For further information about financial assistance please refer to the FAQ page.

Accommodation and shuttles

Accommodation is not included in the conference registration fee.

As further changes in our events are possible, you should book flights, trains and hotels with flexible options and favourable cancellation conditions.

The hotels below have rooms on hold for participants until Wednesday 18 November 2023, in some cases at special rates. Please email the hotel directly, quoting the booking code  CAN23-01  to confirm the exact price of the room.

Hotel AnlageHotel ibis HeidelbergHotel Holländer Hof 
Hotel Bayrischer Hof ISG Hotel Hotel Monpti
B&B HotelLeonardo Hotel Heidelberg City CentreStaycity Aparthotel Heidelberg
Exzellenz HotelMeininger HeidelbergHotel Vier Jahreszeiten Heidelberg

Conference shuttle buses

Conference shuttle buses are free of charge for participants, and depart from designated bus stops near the hotels to EMBL and back, mornings and evenings.

You can now find the conference bus schedule here.

The bus stops for this conference are:

  • Staycity Aparthotel (Speyerer Str. 7)
  • Kurfürsten-Anlage (Opposite Main Train Station)
  • Premier Inn (Kurfürsten-Anlage 23)
  • Leonardo Hotel Heidelberg City Center (Bergheimer Str. 63)
  • Neckarmünzplatz (Heidelberg Tourist Information)
  • ISG Hotel (Im Eichwald 19)

View Conference shuttle bus stops and hotels in a larger map. Please note that not every bus stop will be used for every event.

Further details

Address: EMBL, Meyerhofstraße 1, 69117 Heidelberg, Germany. For further information on getting to EMBL Heidelberg visit Public Transportation to the Venue. For information about accommodation and local transportation please refer to the FAQ page.

On-site information


All meals and coffee breaks are included in the registration fee. Our catering staff will prepare a wide variety of vegetarian meals, meat and fish dishes, soups, pasta, fresh fruit and vegetables, as well as a variety of desserts.

Please wear your badge at all times when serving yourself.

No food or drinks are allowed in the auditorium.

Charging lockers

There are lockers available next to the stairs leading down into the Auditorium. You will find some of those equipped with sockets to charge your smartphone/tablet etc.

Electricity and charging station

In most places the electricity is 220 volts AC (50 cycles). An adaptor and a plug that fits the German socket may be needed for your appliances/laptop (i.e. American, Japanese, etc.). A USB charging station for electronic devices is available at the registration desk.

EMBL merchandise

If you are interested in purchasing an EMBL souvenir (products presented in the glass display in the registration area), please ask at the registration desk for more information.

Health and safety notes

Please read EMBL’s COVID-19 safety policy for on-site events.
Do not smoke in any EMBL building.
Eating and drinking is prohibited in the Auditorium and all laboratories.
Do not enter any restricted areas or the laboratories unless instructed to do so.

If first aid is required …

  • The first aid room is located next to the ATC Registration Desk (room 10- 205).
  • Dial the Emergency number 222 from any EMBL internal phone only.
  • Where is the accident? What happened? How many injured?
  • Emergency number 06221-387 7821 from mobile phones.
  • Please report all accidents to the conference officer at the registration desk.

In case of fire …

  • Press the nearest fire alarm button or the Emergency number 222 from any internal phone.
  • A loud fire alarm will go off if an evacuation is required. On hearing the alarm leave the building immediately following the escape route and fire wardens and head to one of the meeting points
  • Do not use the lifts.

Beyond first aid…

Please remember to bring your own medication, if needed, to the conference. Note that the next pharmacy is a 4-minute drive from the EMBL, but for many medications you will be required to see a doctor to get a prescription.

Ensure in advance that your medical insurance will cover you during your visit in the event that you do need to see a doctor while in Heidelberg. In any case, the EMBL Course and Conference Office will assist you to get to the pharmacy and a doctor of your choice if necessary.


Wi-Fi is available on campus. Log in using the EMBL-Events network and the event specific password, which will be provided on site. The eduroam network (secure, worldwide roaming access service developed for the international research and education community) is also available.

Lost and found

‘’Lost and Found’’ items are kept at the registration desk until the end of the conference.


There are lockers available on-site to store your luggage, which require a 2 EURO coin to operate. There is another luggage room on level E0, which is free to use but remains unlocked during the conference.

Nursing room

There is a nursing room available in the ATC Rooftop Lounge on level A29.


During the conference, an EMBL Photographer may be taking photos. If you would not like to appear in these, please inform the photographer or a member of the Course and Conference Office.


We can help to print your boarding pass/train ticket. Please send it to events@embl.de and collect your print-outs at the registration desk.

Room for prayer, yoga and meditation

There is a room for prayer, meditation and yoga located on level E0 behind the Auditorium. Please be respectful of others using the room.


A variety of activities in Heidelberg can be found on the website of Heidelberg Marketing.

Travel to and from the venue

During the event we provide conference shuttle buses to and from EMBL. In addition, there is the public bus 39A that serves the EMBL campus and taxis can be easily booked at any time. Information on the conference shuttle buses can be found on the individual event website and more detailed information on travelling to EMBL can be found on our Travel Information page.

Useful German expressions

Where is the nearest Covid test centre?
Wo ist das nächste Covid-Testzentrum?
GoodbyeAuf Wiedersehen (formal)
Tschüss (informal)
Good morningGuten Morgen
Good afternoonGuten Tag
Good eveningGuten Abend
Good nightGute Nacht
I’m sorryEs tut mir leid
Excuse me…Entschuldigen Sie
How are you?Wie gehts?
I’m fine thanks. And you?Mir geht es gut , danke. Und Dir/Ihnen?
What is your nameWie heißen Sie? (formal)
Wie heißt du? (informal)
My name is..Ich heiße..
Do you speak EnglishSprechen Sie englisch?
I don’t understandIch verstehe nicht
Please speak more slowlyKönnen Sie bitte langsamer sprechen
Thank youDankeschön
Where is the toilet?Wo ist die Toilette?
Please call me a taxiBitte rufen Sie mir ein Taxi
How do I get to….?Wie komme ich zum/zur…..?
A beer/two beers pleaseEin Bier/zwei Bier bitte
A glass of red/white wine pleaseEin Glas Rot/Weisswein bitte
The menu, pleaseDie Speisekarte, bitte
Is there a local speciality?Gibt es eine Spezialität aus dieser Gegend?
I’m vegetarianIch bin Vegetarier
It was deliciousEs war hervorragend
The bill, pleaseDie Rechnung, bitte
I have a headacheIch habe Kopfschmerzen
I have a sore throatIch habe Halsschmerzen
My stomach hurtsIch habe Magenschmerzen
I’m allergic toIch bin allergisch gegen
I need a doctor who speaks English.Ich brauche einen Arzt, der englisch spricht.
Virtual participation

What’s included?

  • Access to all the livestreamed talks
  • Video library of the recorded talks during and after the event
  • Facility to submit questions

Please note that only on-site participants are able to submit abstracts and participate in the poster sessions.

Event platform

We are using an event platform for this conference. More information about the platform will be shared ahead of the conference.


  • Do not broadcast the conference to unregistered participants.
  • You are encouraged to tweet and post about the event. Tweet unless the speaker specifically says otherwise, but be mindful of unpublished data. 
  • Please do not capture, transmit or redistribute data presented at the meeting.

Additional information can be found in our Code of Conduct.

Health and well-being

It is important to stay healthy and move around, especially when you are attending an event virtually. We have put together a few coffee break stretches and yoga videos in the conference platform for you to enjoy during the event.

How to ask questions

Please use the Q&A function in the event platform.

If you have any other questions, you can go to the Help Desk in the event platform. Click on ‘more’ on the top menu and click Help Desk. 

Time zone

The programme is planned based on the Europe/Berlin time zone, unless otherwise stated. Please take your time zone into consideration when planning your attendance.

Additional information

Please find additional information including FAQs, terms and conditions, COVID-19 safety policy and travelling to EMBL on our Information for participants page.

COVID-19 related questions

COVID-19 information for on-site events at EMBL Heidelberg can be found in our COVID-19 FAQs.


Silver sponsor

Bronze sponsor

Event sponsor

Active Motif

BGI Genomics



Watchmaker Genomics

Media partners

Molecular Oncology, a FEBS Press journal

International Union of Biochemistry and Molecular Biology

Sponsorship opportunities

We offer a variety of event sponsoring possibilities, with the flexibility to select a set sponsorship package or combine individual sponsorship options to suit your event budget. Discounts are available for companies sponsoring multiple events at EMBL Heidelberg. View other conferences, or contact sponsorship@embl.de for further information on sponsoring possibilities.

If you are interested in becoming a media partner of this event, please visit our media partnerships webpage.


EMBL wishes to warn sponsors of EMBL conferences and courses of fraudulent schemes purporting to offer sponsorship opportunities on behalf of EMBL or affiliated with EMBL officials. One current scam campaign of which we are aware is conducted using the name ‘Judy Eastman’ (judy@gopcontact.a2hosted.com) and entails approaches to sponsors offering sponsorship opportunities on EMBL’s behalf. Please be kindly advised that all relevant communication regarding sponsorship of EMBL conferences, symposia and courses is handled by EMBL directly and is sent from an official EMBL account. EMBL does not work with any external providers on sponsorship acquisition.

Please also note that:

  • EMBL never provides attendee lists for purchase. Any offers of such are fraudulent.
  • EMBL will never call or email you to ask for your credit card details or to request a payment.
  • All payments are on invoice.

Suspicious communications purportedly from, for or on behalf of EMBL should be reported to EMBL at the following email address sponsorship@embl.de.

Media kit

Want to let others know you’re attending this event? Take a look at our shareable media and feel free to use them in your social media channels or presentations.

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Pre-conference workshop

For on-site participants only.

This industry webinar will be hosted by our sponsor Scale Biosciences prior to the EMBL Conference: Cancer genomics

on Wednesday 15 November 2023, 10:45 – 11:45

Participation in this workshop is free of charge for registered on-site conference attendees. The number of available places is limited (first come, first served).

All registered conference attendees will receive an email with a registration link in the beginning of August.


Single Cell Genomics at scale: Unlock single-cell workflows with combinatorial indexing

Katharina Danielski
Senior Field Applications Specialist, ScaleBio

At ScaleBio, we leverage the cell as the compartment to employ combinatorial indexing single-cell profiling solutions. This method enables increased levels of sample multiplexing, increased cell throughput, and support for a broad range of single-cell genomics applications. Numbers of cells or nuclei can be scaled exponentially to enable single-cell experiments with 100s of thousands to millions of cells, at a fraction of the cost of on-market single-cell isolation instruments. In this workshop, we will introduce you to the technology and outline our current kits, which support scRNAseq, scATACseq, single-cell methylation, and CRISPR guide enrichment. We will also discuss our data analysis pipeline and some relevant data examples.

Date: 15 - 17 Nov 2023

Location: EMBL Heidelberg and Virtual

Venue: EMBL Advanced Training Centre


Abstract submission: Closed

Registration (On-site): Closed

Registration (Virtual): Closed


  • Isidro Cortes Ciriano
    • Christina Curtis
      Stanford University, USA
      • Nuria Lopez-Bigas
        Barcelona Institute for Research in Biomedicine, Spain
        • Young Seok Ju
          Korea Advanced Institute of Science and Technology (KAIST), Repub

        Contact: Christopher Stocks

        Download event poster

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