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spatial omics

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15 November 2024 Woman in red jacket outdoors with fall foliage behind her

The value of a scientific meet-up

Connections Yuvarani Masarapu, a junior bioinformatician and doctoral student at SciLifeLab in Stockholm, spent a week with EMBL collaborators, finding solutions to research challenges and expanding her scientific perspective.

2024

connections

23 April 2024 This image showcases a processor with neon lights and abstract shapes that represent the flow and integration of spatial omics information. The background shows the analyzed and annotated breast cancer sample.

This image showcases a processor with neon lights and abstract shapes that represent the flow and integration of spatial omics information. The background shows the analyzed and annotated breast cancer sample.

A universal framework for spatial biology

Science & Technology SpatialData is a tool developed by EMBL scientists in cooperation with multiple research institutions to unify and integrate data from different omics technologies in a spatial environment, providing holistic insights into health and disease. Researchers can now freely access and use SpatialData…

2024

science-technology

26 July 2023 Participants listen to the trainer in front of a screen displaying a microscopy image

Imaging-based spatial-omics: EMBO Practical Course at EMBL Rome

Lab MattersScience & Technology The first EMBO Practical Course on imaging-based spatial-omics was organised at EMBL Rome to explore the latest techniques to visualise RNA transcripts and proteins in their native tissues.

2023

lab-mattersscience-technology

10 October 2022 Retinal cells can be seen in a cross section. A blue stain (DAPI) marks the cell nuclei, barcoded background cells are visible in green, while a single dopaminergic cell is visible in the centre, marked in orange (Th) and pink (a second barcode).

Retinal cells can be seen in a cross section. A blue stain (DAPI) marks the cell nuclei, barcoded background cells are visible in green, while a single dopaminergic cell is visible in the centre, marked in orange (Th) and pink (a second barcode).

Light-Seq: from images to sequences in context

Researchers have combined advanced light microscopy with next-generation sequencing to create a method to study cells directly in the context of their native tissues

2022

science

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