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Genomics Core Facility

GeneCore is the in-house genomics service centre at EMBL

Publications

Neutralizing antibody response against the B.1.617.2 (delta) and the B.1.1.529 (omicron) variant after a third mRNA SARS-CoV-2 vaccine dose in kidney transplant recipients.

Benning L, Morath C, Bartenschlager M, Kim H, Reineke M, Beimler J, Buylaert M, Nusshag C, Kälble F, Reichel P, Töllner M, Schaier M, Klein K, Benes V, Rausch T, Rieger S, Stich M, Tönshoff B, Weidner N, Schnitzler P, Zeier M, Süsal C, Tran TH, Bartenschlager R, Speer C

American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 2022

doi:10.1111/ajt.17054.

A faecal microbiota signature with high specificity for pancreatic cancer.

Kartal E, Schmidt TSB, Molina-Montes E, Rodríguez-Perales S, Wirbel J, Maistrenko OM, Akanni WA, Alashkar Alhamwe B, Alves RJ, Carrato A, Erasmus HP, Estudillo L, Finkelmeier F, Fullam A, Glazek AM, Gómez-Rubio P, Hercog R, Jung F, Kandels S, Kersting S, Langheinrich M, Márquez M, Molero X, Orakov A, Van Rossum T, Torres-Ruiz R, Telzerow A, Zych K, MAGIC Study investigators, PanGenEU Study investigators, Benes V, Zeller G, Trebicka J, Real FX, Malats N, Bork P

Gut, 2022

doi:10.1136/gutjnl-2021-324755.

The expansion of human T-bethighCD21low B cells is T cell dependent.

Keller B, Strohmeier V, Harder I, Unger S, Payne KJ, Andrieux G, Boerries M, Felixberger PT, Landry JJM, Nieters A, Rensing-Ehl A, Salzer U, Frede N, Usadel S, Elling R, Speckmann C, Hainmann I, Ralph E, Gilmour K, Wentink MWJ, van der Burg M, Kuehn HS, Rosenzweig SD, Kölsch U, von Bernuth H, Kaiser-Labusch P, Gothe F, Hambleton S, Vlagea AD, Garcia Garcia A, Alsina L, Markelj G, Avcin T, Vasconcelos J, Guedes M, Ding JY, Ku CL, Shadur B, Avery DT, Venhoff N, Thiel J, Becker H, Erazo-Borrás L, Trujillo-Vargas CM, Franco JL, Fieschi C, Okada S, Gray PE, Uzel G, Casanova JL, Fliegauf M, Grimbacher B, Eibel H, Ehl S, Voll RE, Rizzi M, Stepensky P, Benes V, Ma CS, Bossen C, Tangye SG, Warnatz K

Science immunology, 2021

doi:10.1126/sciimmunol.abh0891.

AXL inhibition in macrophages stimulates host-versus-leukemia immunity and eradicates naive and treatment resistant leukemia.

Tirado-Gonzalez I, Descot A, Soetopo D, Nevmerzhitskaya A, Schaffer A, Kur IM, Czlonka E, Wachtel C, Tsoukala I, Muller L, Schafer AL, Weitmann M, Dinse P, Alberto E, Buck MC, Landry JJM, Baying B, Slotta-Huspenina J, Roesler J, Harter PN, Kubasch AS, Meinel J, Elwakeel E, Strack E, Tran Quang C, Abdel-Wahab O, Schmitz M, Weigert A, Schmid T, Platzbecker U, Benes V, Ghysdael J, Bonig H, Gotze KS, Rothlin CV, Ghosh S, Medyouf H

Cancer discovery, 2021

doi:10.1158/2159-8290.CD-20-1378.

Haplotype-resolved diverse human genomes and integrated analysis of structural variation.

Ebert P, Audano PA, Zhu Q, Rodriguez-Martin B, Porubsky D, Bonder MJ, Sulovari A, Ebler J, Zhou W, Serra Mari R, Yilmaz F, Zhao X, Hsieh P, Lee J, Kumar S, Lin J, Rausch T, Chen Y, Ren J, Santamarina M, Höps W, Ashraf H, Chuang NT, Yang X, Munson KM, Lewis AP, Fairley S, Tallon LJ, Clarke WE, Basile AO, Byrska-Bishop M, Corvelo A, Evani US, Lu TY, Chaisson MJP, Chen J, Li C, Brand H, Wenger AM, Ghareghani M, Harvey WT, Raeder B, Hasenfeld P, Regier AA, Abel HJ, Hall IM, Flicek P, Stegle O, Gerstein MB, Tubio JMC, Mu Z, Li YI, Shi X, Hastie AR, Ye K, Chong Z, Sanders AD, Zody MC, Talkowski ME, Mills RE, Devine SE, Lee C, Korbel JO, Marschall T, Eichler EE

Science (New York, N.Y.), 2021

doi:10.1126/science.abf7117.

Germline Elongator mutations in Sonic Hedgehog medulloblastoma.

Waszak SM, Robinson GW, Gudenas BL, Smith KS, Forget A, Kojic M, Garcia-Lopez J, Hadley J, Hamilton KV, Indersie E, Buchhalter I, Kerssemakers J, Jäger N, Sharma T, Rausch T, Kool M, Sturm D, Jones DTW, Vasilyeva A, Tatevossian RG, Neale G, Lombard B, Loew D, Nakitandwe J, Rusch M, Bowers DC, Bendel A, Partap S, Chintagumpala M, Crawford J, Gottardo NG, Smith A, Dufour C, Rutkowski S, Eggen T, Wesenberg F, Kjaerheim K, Feychting M, Lannering B, Schüz J, Johansen C, Andersen TV, Röösli M, Kuehni CE, Grotzer M, Remke M, Puget S, Pajtler KW, Milde T, Witt O, Ryzhova M, Korshunov A, Orr BA, Ellison DW, Brugieres L, Lichter P, Nichols KE, Gajjar A, Wainwright BJ, Ayrault O, Korbel JO, Northcott PA, Pfister SM

Nature, 2020

doi:10.1038/s41586-020-2164-5.

McQ – an open-source multiplexed SARS-CoV-2 quantification platform.

Vonesch SC, Bredikhin D, Dobrev N, Villacorta L, Kleinendorst R, Cacace E, Flock J, Frank M, Jung F, Kornienko J, Mitosch K, Osuna-Lopez M, Zimmermann J, Goettig S, Hamprecht A, Kraeusslich H, Knop M, Typas A, Steinmetz LM, Benes V, Remans K, Krebs AR

medRxiv, 2020

doi:10.1101/2020.12.02.20242628.

Exhausted phenotype of follicular CD8 T cells in CVID.

Klocperk A, Unger S, Friedmann D, Seidl M, Zoldan K, Pfeiffer J, Hausmann O, Benes V, Andrieux G, Boettler T, Sediva A, Bengsch B, Warnatz K

The Journal of allergy and clinical immunology, 2020

doi:10.1016/j.jaci.2020.02.025.

The effects of common structural variants on 3D chromatin structure.

Shanta O, Noor A, Sebat J, Chaisson MJP, Sanders AD, Zhao XF, Malhotra A, Porubsky D, Rausch T, Gardner EJ, Rodriguez OL, Guo L, Collins RL, Fan X, Wen J, Handsaker RE, Fairley S, Kronenberg ZN, Kong XM, Hormozdiari F, Lee DL, Wenger AM, Hastie AR, Antaki D, Anantharaman T, Audano PA, Brand H, Cantsilieris S, Cao H, Cerveira E, Chen C, Chen XT, Chin CS, Chong ZC, Chuang NST, Lambert CC, Church DM, Clarke L, Farrell A, Flores J, Galeey T, Gujral M, Guryev V, Heaton WH, Korlach J, Kumar S, Kwon JY, Lam ET, Lee JE, Lee JC, Lee WP, Lee SP, Li ST, Marks P, Viaud-Martinez K, Meiers S, Munson KM, Navarro FCP, Nelson BJ, Nodzak C, Kyriazopoulou-Panagiotopoulou S, Pang AWC, Rosanio G, Ryan M, Stutz A, Spierings DCJ, Ward A, Welch AME, Xiao M, Xu W, Zhang CS, Zhu QH, Zheng-Bradley X, Lowy E, Yakneen S, McCarroll S, Jun G, Ding L, Koh CL, Flicek P, Chen K, Gerstein MB, Kwok PY, Lansdorp PM, Marth GT, Shi XH, Bashir A, Ye K, Devine SE, Talkowski ME, Mills RE, Marschall T, Korbel JO, Eichler EE, Lee CL

BMC GENOMICS, 2020

doi:10.1186/s12864-020-6516-1.

The molecular landscape of ETMR at diagnosis and relapse.

Lambo S, Gröbner SN, Rausch T, Waszak SM, Schmidt C, Gorthi A, Romero JC, Mauermann M, Brabetz S, Krausert S, Buchhalter I, Koster J, Zwijnenburg DA, Sill M, Hübner JM, Schwalm B, Mack N, Hovestadt V, Ryzhova M, Chan JA, Papillon-Cavanagh S, Ho B, Landgraf P, Witt O, Milde T, Sahm F, Ecker J, Ellison DW, Sumerauer D, Darabi A, Orr BA, Wesseling P, Schittenhelm J, Haberler C, Figarella-Branger D, Gil-da-Costa MJ, Łastowska M, Remke M, Taylor MD, Hauser P, Pietsch T, Grajkowska W, Hasselblatt M, Masliah-Planchon J, Rigau V, Uro-Coste E, Bourdeaut F, Schüller U, Li XN, Wolf S, Alexandrescu S, Jabado N, Giangaspero F, Karajannis MA, Snuderl M, von Hoff K, Korbel JO, Jones DTW, von Deimling A, Pfister SM, Bishop AJR, Huang A, Lichter P, Korshunov A, Kool M

Nature, 2019

doi:10.1038/s41586-019-1815-x.

Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition).

Cossarizza A, Chang HD, Radbruch A, Acs A, Adam D, Adam-Klages S, Agace WW, Aghaeepour N, Akdis M, Allez M, Almeida LN, Alvisi G, Anderson G, Andrä I, Annunziato F, Bacher P, Anselmo A, Bari S, Baldari CT, Barros-Martins J, Barnaba V, Bauer W, Battistini L, Baumgarth N, Baumgart S, Baying B, Baumjohann D, Becher B, Bebawy M, Benes V, Beisker W, Boardman DA, Bogdan C, Beyaert R, Blanco A, Boulais PE, Bradford JA, Borger JG, Borsellino G, Brooks AES, Busch DH, Brenner D, Brinkman RR, Calzetti F, Cameron G, Büscher M, Bushnell TP, Casola S, Cardell SL, Cao X, Cammarata I, Chatenoud L, Celada A, Cavani A, Cassatella MA, Čičin-Šain L, Christakou E, Chow S, Chattopadhyay PK, Cooke A, Cook L, Colombo FS, Clerici M, Coulie PG, Cumano A, Cvetkovic L, Dang VD, Cooper AM, Corbett AJ, Cosma A, Cosmi L, Del Zotto G, Dela Cruz GV, Delacher M, Della Bella S, Dang-Heine C, Davey MS, Davies D, De Biasi S, Dieli F, Diefenbach A, Dörner T, Dolf A, Deniz G, Dellabona P, Di Santo JP, Dessing M, Eckle SBG, Ebner F, Eede P, Edinger M, Dudziak D, Dress RJ, Dutertre CA, Dustin M, Everts B, Evrard M, Erdei A, Esser C, Engel P, Engelhardt B, Ehrhardt GRA, Eich M, Filkor K, Fillatreau S, Feuerer M, Filby A, Felipo-Benavent M, Ferry H, Falk CS, Fehniger TA, Fritzsche W, Frischbutter S, Frenette PS, Frehse B, Foulds GA, Foster J, Förster I, Follo M, Gherardin NA, Gerner W, Geginat J, Gazzinelli RT, Gaudilliere B, Garbi N, Gangaev A, Galbraith DW, Grogan JL, Gori A, Grützkau A, Grummitt D, Hahn J, Haftmann C, Hämmerling G, Hammad H, Gibellini L, Ghoreschi K, Goda K, Ginhoux F, Goettlinger C, Godfrey DI, Goodyear CS, González-Navajas JM, Hernández DC, Herrera G, Herrmann M, Hess C, Höfer T, Hoffmann P, Hogquist K, Holland T, Hansmann L, Hansson G, Harpur CM, Hartmann S, Hauser A, Hauser AE, Haviland DL, Hedley D, Hwang WYK, Hunter CA, Hundemer M, Huehn J, Jäck HM, Ivison SM, Ingelfinger F, Iannone A, Houston JP, Hombrink P, Holmdahl R, Höllt T, Huber JE, Huang FP, Huang B, Hoyer BF, Khan S, Kisielow J, Ketelaars SLC, Khalilnezhad A, Koay HF, Kobow K, Klenerman P, Knopf J, Jonjic S, Kaiser T, Jani PK, Jávega B, Kaufmann SHE, Keller B, Kalina T, Kamradt T, Kurts C, Kurosaki T, Kwok I, Kvistborg P, Kukat C, Kühne J, Kunze-Schumacher H, Kunkel D, Kristyanto H, Kriegsmann K, Krueger A, Kroneis T, Kong WT, Kolls JK, Korn T, Kopf M, Liu Y, Ljunggren HG, Lohoff M, Lombardi G, Levings MK, Lino AC, Liotta F, Litwin V, Lehuen A, LeibundGut-Landmann S, Leipold MD, Leung LYT, Landry J, Lantz O, Lanuti P, LaRosa F, Marshall AJ, Manz RA, Mantovani A, Mair KH, Mair F, Maguire O, Maggi L, Maecker HT, Lunemann S, Lugli E, Ludewig B, Luche H, Lubberts E, Lovett-Racke AE, López-Botet M, Lopez L, Melzer S, Mielenz D, Mei HE, Melchers F, McGuire HM, McInnes IB, McCluskey J, McGrath M, Maueröder C, Mazzoni A, Matarese G, Mattioli AV, Marventano I, Maslinski W, Martínez-Romero A, Martrus G, O'Connor JE, Núñez G, Nourshargh S, Niedobitek A, Orfao A, Ordonez D, Oja A, Ochel A, Palankar R, Oxenius A, Ouyang W, Orlowski-Oliver E, Pavlinic D, Paulsen M, Pattanapanyasat K, Panse I, Minderman H, Mjösberg J, Miller SD, Mills KHG, Moretta L, Mosmann TR, Moore J, Moran B, Muñoz LE, Münz C, Müller S, Multhoff G, Neumann K, Ng LG, Nakayama T, Nasi M, Radbruch H, Quinn KM, Rahmig S, Radstake TRDJ, Rajwa B, Rahn HP, Raz Y, Ravichandran G, Recktenwald D, Rebhahn JA, Reis E Sousa C, Reimer D, Richter L, Remmerswaal EBM, Riddell A, Rico LG, Penter L, Peterson P, Peth C, Petriz J, Piancone F, Pickl WF, Piconese S, Pinti M, Pockley AG, Podolska MJ, Poon Z, Pracht K, Prinz I, Pucillo CEM, Quataert SA, Quatrini L, Schimisky E, Schildberg FA, Schiemann M, Scherer HU, Scheffold A, Schadt L, Sawitzki B, Sautes-Fridman C, Schüler T, Schuh W, Schraivogel D, Schober K, Schmitt S, Schmid S, Schlosser J, Schlitzer A, Saeys Y, Saito T, Ruland J, Saalmüller A, Romagnani C, Rubartelli A, Rieger AM, Robinson JP, Sanz RB, Saresella M, Sandrock I, Santoni A, Samstag Y, Sanderson S, Sakaguchi S, Sala-de-Oyanguren F, Takeda K, Takahama Y, Tárnok A, Tan L, Stehle C, Stark R, Stockinger H, Steinmetz T, Tree TIM, Trebak M, Trowsdale J, Trotter J, Toldi G, Tiegs G, Traggiai E, Tornack J, Scott-Algara D, Sester DP, Shankey TV, Silva-Santos B, Schulte R, Schulz AR, Schulz SR, Scottá C, Spidlen J, Stahlberg A, Stall AM, Stanley N, Simon AK, Sitnik KM, Sozzani S, Speiser DE, Waskow C, Watson JV, Warnes G, Warth S, Weisenburger T, Wiedemann A, Watzl C, Wegener L, Wallace PK, Wang SA, Waisman A, Walker RV, Ward-Hartstonge KA, Warnatz K, Wang XM, Ward MD, Vieira P, Vento-Asturias S, Veldhoen M, van Lier RAW, von Volkmann K, von Borstel A, Volk HD, Voehringer D, van de Veen W, Urbanczyk S, Ulrich H, Tsoumakidou M, Van Isterdael G, Van Gassen S, van der Pol E, van den Broek M, Zhao Y, Ziegler SM, Zielinski C, Zimmermann J, Zychlinsky A, Wurst P, Wong A, Yang J, Yang JHM, Yu L, Yazdanbakhsh M, Zhang H, Yue A, Wilharm A, Wienands J, Willimsky G, Wilkinson RJ, Winkelmann R, Wing JB, Wirz OF, Winkler TH

European journal of immunology, 2019

doi:10.1002/eji.201970107.


Neutralizing antibody response against the B.1.617.2 (delta) and the B.1.1.529 (omicron) variant after a third mRNA SARS-CoV-2 vaccine dose in kidney transplant recipients.

Benning L, Morath C, Bartenschlager M, Kim H, Reineke M, Beimler J, Buylaert M, Nusshag C, Kälble F, Reichel P, Töllner M, Schaier M, Klein K, Benes V, Rausch T, Rieger S, Stich M, Tönshoff B, Weidner N, Schnitzler P, Zeier M, Süsal C, Tran TH, Bartenschlager R, Speer C

American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 2022

doi:10.1111/ajt.17054.

A faecal microbiota signature with high specificity for pancreatic cancer.

Kartal E, Schmidt TSB, Molina-Montes E, Rodríguez-Perales S, Wirbel J, Maistrenko OM, Akanni WA, Alashkar Alhamwe B, Alves RJ, Carrato A, Erasmus HP, Estudillo L, Finkelmeier F, Fullam A, Glazek AM, Gómez-Rubio P, Hercog R, Jung F, Kandels S, Kersting S, Langheinrich M, Márquez M, Molero X, Orakov A, Van Rossum T, Torres-Ruiz R, Telzerow A, Zych K, MAGIC Study investigators, PanGenEU Study investigators, Benes V, Zeller G, Trebicka J, Real FX, Malats N, Bork P

Gut, 2022

doi:10.1136/gutjnl-2021-324755.

The expansion of human T-bethighCD21low B cells is T cell dependent.

Keller B, Strohmeier V, Harder I, Unger S, Payne KJ, Andrieux G, Boerries M, Felixberger PT, Landry JJM, Nieters A, Rensing-Ehl A, Salzer U, Frede N, Usadel S, Elling R, Speckmann C, Hainmann I, Ralph E, Gilmour K, Wentink MWJ, van der Burg M, Kuehn HS, Rosenzweig SD, Kölsch U, von Bernuth H, Kaiser-Labusch P, Gothe F, Hambleton S, Vlagea AD, Garcia Garcia A, Alsina L, Markelj G, Avcin T, Vasconcelos J, Guedes M, Ding JY, Ku CL, Shadur B, Avery DT, Venhoff N, Thiel J, Becker H, Erazo-Borrás L, Trujillo-Vargas CM, Franco JL, Fieschi C, Okada S, Gray PE, Uzel G, Casanova JL, Fliegauf M, Grimbacher B, Eibel H, Ehl S, Voll RE, Rizzi M, Stepensky P, Benes V, Ma CS, Bossen C, Tangye SG, Warnatz K

Science immunology, 2021

doi:10.1126/sciimmunol.abh0891.

AXL inhibition in macrophages stimulates host-versus-leukemia immunity and eradicates naive and treatment resistant leukemia.

Tirado-Gonzalez I, Descot A, Soetopo D, Nevmerzhitskaya A, Schaffer A, Kur IM, Czlonka E, Wachtel C, Tsoukala I, Muller L, Schafer AL, Weitmann M, Dinse P, Alberto E, Buck MC, Landry JJM, Baying B, Slotta-Huspenina J, Roesler J, Harter PN, Kubasch AS, Meinel J, Elwakeel E, Strack E, Tran Quang C, Abdel-Wahab O, Schmitz M, Weigert A, Schmid T, Platzbecker U, Benes V, Ghysdael J, Bonig H, Gotze KS, Rothlin CV, Ghosh S, Medyouf H

Cancer discovery, 2021

doi:10.1158/2159-8290.CD-20-1378.

Haplotype-resolved diverse human genomes and integrated analysis of structural variation.

Ebert P, Audano PA, Zhu Q, Rodriguez-Martin B, Porubsky D, Bonder MJ, Sulovari A, Ebler J, Zhou W, Serra Mari R, Yilmaz F, Zhao X, Hsieh P, Lee J, Kumar S, Lin J, Rausch T, Chen Y, Ren J, Santamarina M, Höps W, Ashraf H, Chuang NT, Yang X, Munson KM, Lewis AP, Fairley S, Tallon LJ, Clarke WE, Basile AO, Byrska-Bishop M, Corvelo A, Evani US, Lu TY, Chaisson MJP, Chen J, Li C, Brand H, Wenger AM, Ghareghani M, Harvey WT, Raeder B, Hasenfeld P, Regier AA, Abel HJ, Hall IM, Flicek P, Stegle O, Gerstein MB, Tubio JMC, Mu Z, Li YI, Shi X, Hastie AR, Ye K, Chong Z, Sanders AD, Zody MC, Talkowski ME, Mills RE, Devine SE, Lee C, Korbel JO, Marschall T, Eichler EE

Science (New York, N.Y.), 2021

doi:10.1126/science.abf7117.

Germline Elongator mutations in Sonic Hedgehog medulloblastoma.

Waszak SM, Robinson GW, Gudenas BL, Smith KS, Forget A, Kojic M, Garcia-Lopez J, Hadley J, Hamilton KV, Indersie E, Buchhalter I, Kerssemakers J, Jäger N, Sharma T, Rausch T, Kool M, Sturm D, Jones DTW, Vasilyeva A, Tatevossian RG, Neale G, Lombard B, Loew D, Nakitandwe J, Rusch M, Bowers DC, Bendel A, Partap S, Chintagumpala M, Crawford J, Gottardo NG, Smith A, Dufour C, Rutkowski S, Eggen T, Wesenberg F, Kjaerheim K, Feychting M, Lannering B, Schüz J, Johansen C, Andersen TV, Röösli M, Kuehni CE, Grotzer M, Remke M, Puget S, Pajtler KW, Milde T, Witt O, Ryzhova M, Korshunov A, Orr BA, Ellison DW, Brugieres L, Lichter P, Nichols KE, Gajjar A, Wainwright BJ, Ayrault O, Korbel JO, Northcott PA, Pfister SM

Nature, 2020

doi:10.1038/s41586-020-2164-5.

McQ – an open-source multiplexed SARS-CoV-2 quantification platform.

Vonesch SC, Bredikhin D, Dobrev N, Villacorta L, Kleinendorst R, Cacace E, Flock J, Frank M, Jung F, Kornienko J, Mitosch K, Osuna-Lopez M, Zimmermann J, Goettig S, Hamprecht A, Kraeusslich H, Knop M, Typas A, Steinmetz LM, Benes V, Remans K, Krebs AR

medRxiv, 2020

doi:10.1101/2020.12.02.20242628.

Exhausted phenotype of follicular CD8 T cells in CVID.

Klocperk A, Unger S, Friedmann D, Seidl M, Zoldan K, Pfeiffer J, Hausmann O, Benes V, Andrieux G, Boettler T, Sediva A, Bengsch B, Warnatz K

The Journal of allergy and clinical immunology, 2020

doi:10.1016/j.jaci.2020.02.025.

The effects of common structural variants on 3D chromatin structure.

Shanta O, Noor A, Sebat J, Chaisson MJP, Sanders AD, Zhao XF, Malhotra A, Porubsky D, Rausch T, Gardner EJ, Rodriguez OL, Guo L, Collins RL, Fan X, Wen J, Handsaker RE, Fairley S, Kronenberg ZN, Kong XM, Hormozdiari F, Lee DL, Wenger AM, Hastie AR, Antaki D, Anantharaman T, Audano PA, Brand H, Cantsilieris S, Cao H, Cerveira E, Chen C, Chen XT, Chin CS, Chong ZC, Chuang NST, Lambert CC, Church DM, Clarke L, Farrell A, Flores J, Galeey T, Gujral M, Guryev V, Heaton WH, Korlach J, Kumar S, Kwon JY, Lam ET, Lee JE, Lee JC, Lee WP, Lee SP, Li ST, Marks P, Viaud-Martinez K, Meiers S, Munson KM, Navarro FCP, Nelson BJ, Nodzak C, Kyriazopoulou-Panagiotopoulou S, Pang AWC, Rosanio G, Ryan M, Stutz A, Spierings DCJ, Ward A, Welch AME, Xiao M, Xu W, Zhang CS, Zhu QH, Zheng-Bradley X, Lowy E, Yakneen S, McCarroll S, Jun G, Ding L, Koh CL, Flicek P, Chen K, Gerstein MB, Kwok PY, Lansdorp PM, Marth GT, Shi XH, Bashir A, Ye K, Devine SE, Talkowski ME, Mills RE, Marschall T, Korbel JO, Eichler EE, Lee CL

BMC GENOMICS, 2020

doi:10.1186/s12864-020-6516-1.

The molecular landscape of ETMR at diagnosis and relapse.

Lambo S, Gröbner SN, Rausch T, Waszak SM, Schmidt C, Gorthi A, Romero JC, Mauermann M, Brabetz S, Krausert S, Buchhalter I, Koster J, Zwijnenburg DA, Sill M, Hübner JM, Schwalm B, Mack N, Hovestadt V, Ryzhova M, Chan JA, Papillon-Cavanagh S, Ho B, Landgraf P, Witt O, Milde T, Sahm F, Ecker J, Ellison DW, Sumerauer D, Darabi A, Orr BA, Wesseling P, Schittenhelm J, Haberler C, Figarella-Branger D, Gil-da-Costa MJ, Łastowska M, Remke M, Taylor MD, Hauser P, Pietsch T, Grajkowska W, Hasselblatt M, Masliah-Planchon J, Rigau V, Uro-Coste E, Bourdeaut F, Schüller U, Li XN, Wolf S, Alexandrescu S, Jabado N, Giangaspero F, Karajannis MA, Snuderl M, von Hoff K, Korbel JO, Jones DTW, von Deimling A, Pfister SM, Bishop AJR, Huang A, Lichter P, Korshunov A, Kool M

Nature, 2019

doi:10.1038/s41586-019-1815-x.

Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition).

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European journal of immunology, 2019

doi:10.1002/eji.201970107.

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