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Planetary Biology

Understanding life in its natural context

ADAPTCHEM

Adaptive capacity of marine microbial communities to anthropogenic chemicals

Anthropogenic chemical pollution is an accelerating planetary-scale stressor that profoundly impacts marine ecosystems. Microbial communities mediate the fate of most environmental contaminants and are responsible for the planet’s primary chemical-buffering capacity. Yet we lack a mechanistic understanding of how exposure, biodiversity, and evolutionary history shape microbial resilience to increasingly complex pollutant mixtures. This project integrates natural marine ecotron communities and large-scale chemical–microbial interaction profiling to elucidate how marine microbes adapt to – and potentially mitigate – the impact of pesticide and pollutant mixtures. The results will deepen our insights into mechanistic planetary-scale biology by linking genetic and biochemical processes with community dynamics and ecosystem-level resilience.

Figure 1. Experimental workflow showing adaptation of marine communities to pesticides, followed by cell abundance analysis, sequencing and LC/MS-based pollutant degradation analysis. Image generated by ChatGPT.

Objectives

  • Quantify adaptive trajectories and fitness tradeoffs in natural marine microbial communities exposed to anthropogenic chemical mixtures.
  • Identify species-level mechanisms underlying resilience or vulnerability to pollutant exposure and discover new metabolic pathways. 

We integrate ecotron experiments and chemostat-based continuous culture adaptation with high-throughput LC-MS metabolomics, 16S rRNA amplicon sequencing and flow cytometry to elucidate community-level resilience, functional reorganization, and adaptive dynamics under ecologically realistic conditions, as depictured in Figure 1.

Figure 2. An in-house-built chemostat system with six parallel cultures to enable long-term microbial adaptation under continuous pesticide exposure. Credit: Dragana Despotovic.

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