{"id":33820,"date":"2020-11-23T13:53:30","date_gmt":"2020-11-23T12:53:30","guid":{"rendered":"https:\/\/www.embl.org\/news\/?p=33820"},"modified":"2024-03-22T11:14:20","modified_gmt":"2024-03-22T10:14:20","slug":"atlanteco-launch","status":"publish","type":"post","link":"https:\/\/www.embl.org\/news\/science\/atlanteco-launch\/","title":{"rendered":"Microbiomes help predict the future of the Atlantic"},"content":{"rendered":"\n

AtlantECO \u2013 mapping the ocean\u2019s microbiome<\/h3>\n\n\n\n

A new and ambitious project, AtlantECO<\/a>, brings together 36 organisations, including EMBL\u2019s European Bioinformatics Institute (EMBL-EBI)<\/a>, in the quest to explore the Atlantic Ocean from pole to pole. The project, funded by the European Union, will map new and existing knowledge about the microscopic organisms that inhabit rivers, coastal waters, the open ocean, marine sediments, and the atmosphere. The study will also analyse microbes found on plastic litter, which is now a part of all these environments.<\/p>\n\n\n\n

Microbiomes support life on Earth and are key to understanding marine ecosystems. Inspired by medical research that combines next-generation  genetic, imaging, and environmental approaches, AtlantECO will develop diagnostic tools and metrics to assess and predict changes in the health of the Atlantic Ocean.<\/p>\n\n\n\n

Cutting-edge explorers<\/h3>\n\n\n\n

Researchers will conduct fieldwork on board national oceanographic vessels<\/a> and specialised sailing boats. Stopovers will be organised with local communities around the Atlantic basin, engaging in outreach, citizen science, and awareness campaigns, delivering a wide-ranging capacity-building\u00a0 programme for professionals, students, and young people.<\/p>\n\n\n\n

AtlantECO will determine how marine regions and their ecosystems are connected across the Atlantic Ocean. It will do this by developing models that account for dynamic processes such as large river plumes and ocean circulation. These models will help predict the migration of species, the ability of the ocean to capture and store carbon dioxide, the transport of pollutants and hazards, and the balance between ecosystem health and human activities.<\/p>\n\n\n\n

Navigating the data<\/h3>\n\n\n\n

\u201cThe colossal amount of data generated will be curated and openly shared with the international scientific community, allowing researchers everywhere to build their own analysis and modelling tools,\u201d explains Guy Cochrane, Team Leader, Data Coordination and Archiving at EMBL-EBI<\/a>. \u201cThis kind of international and interdisciplinary work will help us understand the impact human activity has on oceans.”<\/p>\n\n\n\n

\u201cEMBL-EBI will help to ensure that suitable data standards and best practices are used across AtlantECO\u2019s impressive range of activities. These data will be crucial for new discoveries, so they must be reliable and easily accessible,\u201d continues Cochrane.<\/p>\n\n\n\n

\u201cAlongside data management, EMBL-EBI will also play an important analysis role,\u201d says Lorna Richardson, Microbiome Resources Co-ordinator at EMBL-EBI<\/a>. \u201cUsing our cutting-edge tools, we\u2019ll assemble a large number of omics datasets and analyse them in a coherent way using our MGnify system<\/a>. This will also enable biodiscovery and the dissemination of genomic data to more specialised biodiversity portals, thus enabling further discoveries.\u201d<\/p>\n\n\n\n

\u201cThe open data from the project will also link to other initiatives, such as Tara Oceans and a number of European Research Council-funded studies,\u201d adds Peer Bork, Director of EMBL\u2019s Heidelberg Scientific Activities<\/a>. \u201cTogether, these innovative projects will contribute to better understanding our planet\u2019s microbiome.\u201d<\/p>\n\n\n\n

Filling in the gaps<\/h3>\n\n\n\n

This huge scientific effort echoes the Bel\u00e9m Statement<\/a>, co-signed in July 2017 by the European Union, Brazil, and South Africa, which aims to fill knowledge gaps between the widely studied North Atlantic and the under-studied South Atlantic regions.<\/p>\n\n\n\n

Five case studies co-developed with local stakeholders around the Atlantic basin will demonstrate the value of AtlantECO\u2019s results for society and for the blue economy: a concept that refers to the sustainable use of ocean resources for economic growth, improved livelihoods, and ocean health. The case studies will address the early detection of harmful threats in aquaculture sites, the impact on microbiomes and coastal ecosystems of mining off the coast of southern Africa, the impacts of climate change on fisheries value chains, the response of microbiomes to offshore drilling, and the impact of fossil fuel extraction off the coast of Brazil.<\/p>\n\n\n\n

This post was originally published on EMBL-EBI News<\/a>.<\/p>\n","protected":false},"excerpt":{"rendered":"

Microbiomes, plastics, and connectivity \u2013 AtlantECO aims to understand the fabric of the Atlantic Ocean.<\/p>\n","protected":false},"author":47,"featured_media":33822,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"footnotes":""},"categories":[17595,2],"tags":[5610,87,28,36,684,88,5612,233,817,816,829,190],"embl_taxonomy":[2906],"class_list":["post-33820","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-connections","category-science","tag-atlanteco","tag-biodiversity","tag-bioinformatics","tag-embl-ebi","tag-environment","tag-metagenomics","tag-mgnify","tag-microbiome","tag-ocean","tag-tara","tag-tara-ocean-foundation","tag-tara-oceans","embl_taxonomy-embl-ebi"],"acf":{"vf_locked":false,"featured":true,"show_featured_image":false,"color":"#007B53","link_color":"#fff","article_intro":"

The world\u2019s oceans are facing a worrying suite of threats caused by humans. Marine ecosystems are changing faster than ever before, as a result of overfishing, pollution, and global warming. These silent shifts have profound impacts on animals and people everywhere, so understanding them is crucial.<\/p>\n","related_links":[{"link_description":"EMBL and the Tara Oceans Foundation","link_url":"https:\/\/www.embl.org\/topics\/tara\/"},{"link_description":"The origins of plastics pollution at sea","link_url":"https:\/\/www.embl.org\/news\/science\/the-origins-of-plastic-pollution-at-sea\/"}],"article_sources":false,"in_this_article":[{"heading_description":"AtlantECO \u2013 mapping the ocean\u2019s microbiome","anchor":"#a1"},{"heading_description":"Cutting-edge explorers","anchor":"#a2"},{"heading_description":"Navigating the data","anchor":"#a3"},{"heading_description":"Filling in the gaps","anchor":"#a4"}],"youtube_url":"","mp4_url":"","video_caption":"","press_contact":"None","translations":false,"embl_taxonomy_term_who":false,"embl_taxonomy_term_what":false,"embl_taxonomy_term_where":false},"embl_taxonomy_terms":[{"uuid":"a:3:{i:0;s:36:\"b14d3f13-5670-44fb-8970-e54dfd9c921a\";i:1;s:36:\"89e00fee-87f4-482e-a801-4c3548bb6a58\";i:2;s:36:\"a99d1a7c-ca83-4c00-ab61-d082d3e41ce3\";}","parents":[],"name":["EMBL-EBI"],"slug":"embl-ebi","description":"Where > All EMBL sites > EMBL-EBI"}],"yoast_head":"\nMicrobiomes help predict the future of the Atlantic | EMBL<\/title>\n<meta name=\"description\" content=\"AtlantECO reunites 30 institutes, including EMBL-EBI, in a quest to understand what the microbes living in the Atlantic ocean can tell us.\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.embl.org\/news\/science\/atlanteco-launch\/\" \/>\n<meta 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