{"id":13696,"date":"2018-06-20T16:04:24","date_gmt":"2018-06-20T14:04:24","guid":{"rendered":"https:\/\/news.embl.de\/?p=13696"},"modified":"2024-03-22T23:20:50","modified_gmt":"2024-03-22T22:20:50","slug":"new-theory-deepens-understanding-of-turing-patterns","status":"publish","type":"post","link":"https:\/\/www.embl.org\/news\/science\/new-theory-deepens-understanding-of-turing-patterns\/","title":{"rendered":"New insights into Turing patterns"},"content":{"rendered":"\n<p>A team of researchers at EMBL have expanded Alan Turing\u2019s seminal theory on how patterns are created in biological systems. This work, published on 20 June in <em>Physical Review X<\/em>, may answer whether nature\u2019s patterns are governed by Turing\u2019s mathematical model, and could have applications in tissue engineering.<\/p>\n\n\n\n<p>Alan Turing sought to explain how patterns in nature arise with his 1952 theory on morphogenesis. The stripes of a zebra, the arrangement of fingers and the radial whorls in the head of a sunflower, he proposed, are all determined through a unique interaction between molecules spreading out through space and chemically interacting with each other. Turing\u2019s famous theory can be applied to various fields, from biology to astrophysics.<\/p>\n\n\n\n<p>Many biological patterns have been proposed to arise according to Turing\u2019s rules, but scientists have not yet been able to provide a definitive proof that these biological patterns are governed by Turing\u00b4s theory. Theoretical analysis also seemed to predict that Turing systems are intrinsically very fragile, which makes it seem unlikely that these systems should govern patterns in nature.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">Going beyond Turing\u2019s theory<\/h3>\n\n\n\n<p>Xavier Diego, James Sharpe and colleagues from EMBL\u2019s new site in Barcelona analysed computational evidence &#8211; gathered when they were based at the Centre for Genomic Regulation (CRG) &#8211; that Turing systems can be much more flexible than previously thought. Following this hint, the scientists, now at EMBL Barcelona, expanded Turing\u2019s original theory by using graph theory: a branch of mathematics that studies the properties of networks and makes it easier to work with complex, realistic systems. This led to the realization that network topology \u2013the structure of the feedback between the networks&#8217; components\u2013 is what determines many fundamental properties of a Turing system. Their new topological theory provides a unifying view of many crucial properties for Turing systems that were previously not well understood and explicitly defines what is required to make a successful Turing system.<\/p>\n\n\n<div\n  class=\"vf-embed vf-embed--custom-ratio\"\n\n  style=\"--vf-embed-max-width: 100%;\n    --vf-embed-custom-ratio-x: 640;\n    --vf-embed-custom-ratio-y: 360;\"><iframe loading=\"lazy\" width=\"640\" height=\"360\" src=\"https:\/\/www.youtube.com\/embed\/Mlxn_QAv70E\" frameborder=\"0\" allow=\"accelerometer; autoplay; encrypted-media; gyroscope; picture-in-picture\" allowfullscreen><\/iframe><\/div>\n\n\n\n<p class=\"vf-figure__caption\"><br \/><em>Video explaining the paper<\/em><\/p>\n\n\n\n<p>\u201cWe learnt that studying a Turing system through the topological lens really simplifies the analysis. For example, understanding the source of the diffusion restrictions becomes straightforward, and more importantly, we can easily see what modifications are needed to relax these restrictions,\u201d explains Xavier Diego, first author of the paper. \u201cOur approach can be applied to general Turing systems, and the properties will be true for networks with any number of components. We can now predict if the activity in two nodes in the network is in or out of phase, and we also found out which changes are necessary to switch this around. This allows us to build networks that make any desired pair of substances overlap in space, which could have interesting applications in tissue engineering.\u201d<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">Turing hieroglyphs for experimental groups<\/h3>\n\n\n\n<p>The researchers also provide a pictorial method that enables researchers to easily analyse existing networks or to come up with new network designs. \u201cWe call them \u2018Turing hieroglyphs\u2019 in the lab,\u201d says EMBL Barcelona group leader James Sharpe, who led the work. \u201cBy using these hieroglyphs, we hope that our methods will be adopted by both theoreticians and by experimental groups that are trying to implement Turing networks in biological cells.\u201d<\/p>\n\n\n\n<p>This expanded theory provides experimental research groups with a new approach to making biological cells develop in patterns in the lab. If experimental groups are successful in this, the questions over whether Turing\u2019s theory of morphogenesis applies to biological systems will finally be answered.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>EMBL scientists extend Turing\u2019s theory to help understand how biological patterns are created<\/p>\n","protected":false},"author":55,"featured_media":13698,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"footnotes":""},"categories":[2,17591],"tags":[645,497,643,647,1748,500,648,646],"embl_taxonomy":[9762,19377],"class_list":["post-13696","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-science","category-science-technology","tag-alan-turing","tag-barcelona","tag-morphogenesis","tag-pattern-formation","tag-press-release","tag-sharpe","tag-turing","tag-turing-pattern","embl_taxonomy-embl-barcelona","embl_taxonomy-sharpe-group"],"acf":{"article_intro":"<p>EMBL scientists extend Turing\u2019s theory to help understand how biological patterns are created<\/p>\n","related_links":[{"link_description":"Research of the Sharpe group at EMBL Barcelona","link_url":"https:\/\/www.embl.es\/research\/unit\/sharpe\/"},{"link_description":"More about EMBL Barcelona","link_url":"https:\/\/www.embl.es\/research\/unit\/"},{"link_description":"More about the CRG","link_url":"http:\/\/www.crg.eu\/"}],"article_sources":[{"source_description":"<p>Diego, X., <em>et al<\/em>. Key features of Turing systems are determined purely by network topology. <em>Physical Review X<\/em>, published online 20 June 2018. DOI: 10.1103\/PhysRevX.8.021071<\/p>\n","source_link_url":"https:\/\/journals.aps.org\/prx\/abstract\/10.1103\/PhysRevX.8.021071"}],"vf_locked":false,"featured":false,"color":"#007B53","link_color":"#fff","show_featured_image":false,"in_this_article":false,"youtube_url":"","mp4_url":"","video_caption":"","translations":false,"press_contact":"EMBL Generic"},"embl_taxonomy_terms":[{"uuid":"a:3:{i:0;s:36:\"b14d3f13-5670-44fb-8970-e54dfd9c921a\";i:1;s:36:\"89e00fee-87f4-482e-a801-4c3548bb6a58\";i:2;s:36:\"762176bb-d12e-4c94-8964-6dbb76e15c42\";}","parents":[],"name":["EMBL Barcelona"],"slug":"embl-barcelona","description":"Where &gt; All EMBL sites &gt; EMBL Barcelona"},{"uuid":"a:3:{i:0;s:36:\"302cfdf7-365b-462a-be65-82c7b783ebf7\";i:1;s:36:\"18a7a17b-e276-4afd-b0ca-8ddac1883d45\";i:2;s:36:\"6c31c788-04a1-48b8-a532-fdc251506b57\";}","parents":[],"name":["Sharpe Group"],"slug":"sharpe-group","description":"What &gt; Tissue biology and disease modelling &gt; Sharpe Group"}],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v26.2 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>New insights into Turing patterns | EMBL<\/title>\n<meta name=\"description\" content=\"EMBL scientists have expanded Alan Turing\u2019s theory on how patterns are created in biology. 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