{"id":11347,"date":"2017-11-14T16:17:40","date_gmt":"2017-11-14T15:17:40","guid":{"rendered":"https:\/\/news.embl.de\/?p=11347"},"modified":"2024-03-22T11:48:43","modified_gmt":"2024-03-22T10:48:43","slug":"high-res-model-ebola-virus","status":"publish","type":"post","link":"https:\/\/www.embl.org\/news\/science\/high-res-model-ebola-virus\/","title":{"rendered":"High-res Ebola model could spark new questions"},"content":{"rendered":"\n<p>Although the ravages of the Ebola virus are no secret, the structure of some of the virus\u2019 most minute components have remained a mystery. EMBL\u2019s <a href=\"https:\/\/www.embl.de\/research\/units\/scb\/briggs\/members\/index.php?s_personId=CP-60003371\">John Briggs<\/a> explains the key finding of a <a href=\"https:\/\/www.nature.com\/articles\/nature24490\" target=\"_blank\" rel=\"noopener noreferrer\">recent paper<\/a> published in <em>Nature<\/em> that reveals the make-up of a critical part of the Ebola virus, called the nucleocapsid.<\/p>\n\n\n\n<p>EMBL researchers have collaborated with researchers from the University of Marburg in Germany and the Institute for Frontier Life and Medical Sciences in Japan to create a 3D model of the Ebola virus\u2019 nucleocapsid. By creating a model of this structure that surpasses the resolution of existing models, the team hopes to have provided the scientific community with a catalyst for answering important questions about how the Ebola virus replicates and infects new host cells.<\/p>\n\n\n\n<div class=\"wp-block-image size-full wp-image-11352\"><figure class=\"vf-figure  | vf-figure--align vf-figure--align-inline-start  \"><img loading=\"lazy\" decoding=\"async\" width=\"620\" height=\"380\" class=\"vf-figure__image\" src=\"https:\/\/news.embl.de\/wp-content\/uploads\/2017\/11\/171114-briggs-ebola.jpg\" alt=\"the 3D model developed by Briggs and his team\" class=\"wp-image-11352\" srcset=\"https:\/\/www.embl.org\/news\/wp-content\/uploads\/2017\/11\/171114-briggs-ebola.jpg 620w, https:\/\/www.embl.org\/news\/wp-content\/uploads\/2017\/11\/171114-briggs-ebola-300x184.jpg 300w\" sizes=\"auto, (max-width: 620px) 100vw, 620px\" \/><figcaption class=\"vf-figure__caption\">The 3D model developed by Briggs and his team is the highest resolution model of a nucleocapsid that has been imaged within the Ebola virus. Image: Wan <em>et al<\/em><\/figcaption><\/figure><\/div>\n\n\n\n<h3 class=\"wp-block-heading\">What did you do?<\/h3>\n\n\n\n<p>We created a 3D model of a crucial part of the Ebola virus called the nucleocapsid. The Ebola virus is like a long tube. Inside that tube is the nucleocapsid: the genetic material of the virus (RNA) wound up with a large number of proteins into a structure that looks sort of like a spring. The nucleocapsid is important because it packages the RNA in order to make a new virus. In addition, when the virus fuses with a new cell and releases its RNA into the host, the protein helps protect the genetic material against the cell\u2019s defence mechanisms. Proteins in the nucleocapsid are needed for the process of copying the RNA, too.<\/p>\n\n\n\n<p>Using cryo-electron tomography, we calculated a 3D model which allows us to see how the proteins that compose the nucleocapsid are folded up and how the different components are connected \u2013 how the proteins are bound to the RNA and to one another.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">Why is this important?<\/h3>\n\n\n\n<p>Our team\u2019s 3D models provide a starting point for understanding the structure of the virus. Although other groups, including ourselves, have modeled the Ebola nucleocapsid before, we have now done our imaging at a much higher level of detail, and have done it within the virus itself. This level of detail wasn\u2019t available for Ebola or any other related viruses with this same kind of spring-shaped nucleocapsid.<\/p>\n\n\n\n<p>Since this is basic science, it\u2019s tricky to pinpoint one particular way this will prove to be important later on. But if a future researcher is trying to understand how the Ebola virus works and has a 3D model of the nucleocapsid that she can rotate on a computer, even if the model doesn\u2019t directly answer the question she\u2019s been thinking about right then, hopefully our model could\u2014consciously or unconsciously\u2014help inform the questions she may ask in the future.<\/p>\n\n\n<div class=\"vf-box vf-box--normal vf-box-theme--primary\">\n<h3>The technique<\/h3>\n<p class=\"vf-box__text\">Combined cryo-electron tomography and subtomogram averaging enables scientists to study structures inside irregular viruses like HIV, or within cells. In essence, the scientists use an electron microscope to obtain a 3D image of the sample. They then identify all the copies of the object they want to study and use software to rotate the 3D image of each copy so that they are all facing the same way. By repeating this procedure with thousands of images, the scientists can obtain an accurate picture. With this approach, researchers can study such samples without having to purify them in a test-tube, which means that they see them in their real state. <\/p><\/div>\n","protected":false},"excerpt":{"rendered":"<p>EMBL researchers create highest resolution 3D model of important structure within Ebola virus<\/p>\n","protected":false},"author":56,"featured_media":11348,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"footnotes":""},"categories":[2,17591],"tags":[348,501,43,35],"embl_taxonomy":[],"class_list":["post-11347","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-science","category-science-technology","tag-briggs","tag-disease-modelling","tag-heidelberg","tag-structural-biology"],"acf":{"article_intro":"<p>EMBL researchers create highest resolution 3D model of important structure within Ebola virus<\/p>\n","related_links":[{"link_description":"Briggs group ","link_url":"https:\/\/www.embl.de\/research\/units\/scb\/briggs\/index.html"},{"link_description":"Study on HIV drugs by the Briggs group","link_url":"https:\/\/news.embl.de\/science\/1607-hiv-drugs\/"},{"link_description":"WHO factsheet: Ebola virus disease","link_url":"http:\/\/www.who.int\/mediacentre\/factsheets\/fs103\/en\/"}],"article_sources":[{"source_description":"<p><span class=\"source\">Wan W <em>et al<\/em>. <em>Cell<\/em>, published online 8 November, 2017. DOI: 10.1038\/nature24490<\/span><\/p>\n","source_link_url":"http:\/\/dx.doi.org\/10.1038\/nature24490"}],"vf_locked":false,"featured":false,"color":"#007B53"},"embl_taxonomy_terms":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v26.2 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>High-res model of Ebola virus could spark new questions | EMBL<\/title>\n<meta name=\"description\" content=\"EMBL&#039;s John Briggs explains the key finding of a recent paper published in Nature that reveals a high resolution model of a structure in the Ebola virus\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.embl.org\/news\/science\/high-res-model-ebola-virus\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"High-res model of Ebola virus could spark new questions | EMBL\" \/>\n<meta property=\"og:description\" content=\"EMBL&#039;s John Briggs explains the key finding of a recent paper published in Nature that reveals a high resolution model of a structure in the Ebola virus\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.embl.org\/news\/science\/high-res-model-ebola-virus\/\" \/>\n<meta property=\"og:site_name\" content=\"EMBL\" \/>\n<meta property=\"article:publisher\" content=\"https:\/\/www.facebook.com\/embl.org\/\" \/>\n<meta property=\"article:published_time\" content=\"2017-11-14T15:17:40+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2024-03-22T10:48:43+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/www.embl.org\/news\/wp-content\/uploads\/2017\/11\/171114_Briggs_ib.jpg\" \/>\n\t<meta property=\"og:image:width\" content=\"620\" \/>\n\t<meta property=\"og:image:height\" content=\"425\" \/>\n\t<meta property=\"og:image:type\" content=\"image\/jpeg\" \/>\n<meta name=\"author\" content=\"Sarah B. 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