{"id":3437,"date":"2024-10-01T08:41:58","date_gmt":"2024-10-01T08:41:58","guid":{"rendered":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/?page_id=3437"},"modified":"2025-04-10T08:28:32","modified_gmt":"2025-04-10T08:28:32","slug":"equipment","status":"publish","type":"page","link":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/equipment\/","title":{"rendered":"Equipment"},"content":{"rendered":"\n<p><\/p>\n\n\n\n<div class=\"vf-grid | vf-grid__col-1\"><div class=\"vf-grid__col--span-6\"><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<h2 class=\"wp-block-heading\">Microscopes<\/h2>\n\n\n\n<div class=\"vf-grid | vf-grid__col-6\"><div class=\"vf-grid__col--span-6\"><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<figure class=\"wp-block-table\"><table><thead><tr><th>Microscope<\/th><th>Main features<\/th><th>Objectives<\/th><\/tr><\/thead><tbody><tr><td>Nikon AX\/AR<\/td><td>Laser Scanning confocal microscope. 4 detectors, 2 APD&#8217;s and 2 PMT&#8217;s. 4 lasers available (405, 488, 565, 640). Driven by NIS-Elements<\/td><td>4x, 10x, 20x NA 0.75, 40x dry NA 0.95, 60x NA 1.42 oil immersion, 25x NA 1.05 silicon oil and 40x NA 1.3 silicon oil. Last two objectives upon request.<\/td><\/tr><tr><td>Leica Thunder<\/td><td>Fast epifluorescence microscope. LED engine with 405, 475, 555, 635 and 730. sCMOS camera Zyla. &#8220;Computational clearing&#8221; (deblurring) as post-processing available.<\/td><td>5x, 10x, 20x LWD NA 0.4 (for plastic), 20x NA 0.8, 63x oil<\/td><\/tr><tr><td>Crest Optics V3 and DeepSIM<\/td><td>System has confocal, epifluorescence and super-resolution modes. 7 lasers available (405, 446, 488, 518, 545, 637 and 748 nm). sCMOS camera Prime 95B. Driven by NIS-Elements<\/td><td>4x, 10x, 20x NA 0.75, 40x dry NA 0.95, 60x NA 1.42 oil immersion, 25x NA 1.05 silicon oil and 40x NA 1.3 silicon oil. Last two objectives upon request.<\/td><\/tr><tr><td>Olympus VS200<br>Automated slide scanner. <\/td><td>Xylis LED light engine. Orca Flash V2 sCMOS camera. Automated oil dispenser. Slide tray loader for more than 200 slides.<\/td><td>2x, 4x, 10x, 20x NA 0.8, 40x dry NA 0.95 and 40x oil NA 1.3.<\/td><\/tr><tr><td>Alpenglow OTLS<\/td><td>Hybrid open-top light sheet microscope. 4 lasers available, 405, 488, 656 and 640. 2 PCO sCMOS cameras.<\/td><td>2 detection paths, an ODO equivalent to a 5x and a NODO equivalent to a 20x.<\/td><\/tr><tr><td>SMZ25<\/td><td>Motorized stereo microscope with fluorescence. Filters available for GFP and mCherry. Qi CCD camera. NIS-Elements<\/td><td>1x and 2x<\/td><\/tr><tr><td>Abberior STEDYCON<\/td><td>Compact STED system. Available lasers for confocal 405, 488, 565 and 640. Available STED laser<\/td><td>100x<\/td><\/tr><\/tbody><\/table><\/figure>\n\n<\/div>\n<\/div>\n<\/div>\n\n<\/div>\n<\/div>\n<\/div>\n\n\n\n<div style=\"height:20px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div class=\"vf-grid | vf-grid__col-1\"><div><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<h2 class=\"wp-block-heading\">Image analysis<\/h2>\n\n\n\n<figure class=\"wp-block-table\"><table><thead><tr><th>Resource<\/th><th>Main Features<\/th><th><\/th><\/tr><\/thead><tbody><tr><td>Workstation<\/td><td>GPU<\/td><td><\/td><\/tr><tr><td>Imaris<\/td><td><\/td><td><\/td><\/tr><tr><td>AIVIA<\/td><td><\/td><td><\/td><\/tr><\/tbody><\/table><\/figure>\n\n\n\n<p><\/p>\n\n<\/div>\n<\/div>\n<\/div>\n\n\n\n<div style=\"height:20px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div class=\"vf-grid | vf-grid__col-1\"><div><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<h2 class=\"wp-block-heading\">Tissue processing<\/h2>\n\n\n\n<figure class=\"wp-block-table\"><table><thead><tr><th>Instrument<\/th><th>Room<\/th><\/tr><\/thead><tbody><tr><td>Leica Cryostat CM3050S<\/td><td>59<\/td><\/tr><tr><td>Cryostat Thermo Scientific NX70<\/td><td>59<\/td><\/tr><tr><td>Microtome Leica RM2135 &#8211; manual<\/td><td>59<\/td><\/tr><tr><td>Microtome Leica RM2135 &#8211; semi-automated<\/td><td>59<\/td><\/tr><tr><td>Vibratome Leica VT1000S (2 units)<\/td><td>59<\/td><\/tr><\/tbody><\/table><\/figure>\n\n\n\n<p><\/p>\n\n<\/div>\n<\/div>\n<\/div>\n\n\n\n<h2 class=\"wp-block-heading\"><\/h2>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":5,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"template-title-left-aligned.php","meta":{"_acf_changed":false,"footnotes":""},"embl_taxonomy":[],"class_list":["post-3437","page","type-page","status-publish","hentry"],"acf":[],"embl_taxonomy_terms":[],"_links":{"self":[{"href":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/wp-json\/wp\/v2\/pages\/3437","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/wp-json\/wp\/v2\/users\/5"}],"replies":[{"embeddable":true,"href":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/wp-json\/wp\/v2\/comments?post=3437"}],"version-history":[{"count":10,"href":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/wp-json\/wp\/v2\/pages\/3437\/revisions"}],"predecessor-version":[{"id":6207,"href":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/wp-json\/wp\/v2\/pages\/3437\/revisions\/6207"}],"wp:attachment":[{"href":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/wp-json\/wp\/v2\/media?parent=3437"}],"wp:term":[{"taxonomy":"embl_taxonomy","embeddable":true,"href":"https:\/\/www.embl.org\/groups\/light-imaging-facility\/wp-json\/wp\/v2\/embl_taxonomy?post=3437"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}