Recommendations for accelerating open preprint peer review to improve the culture of science.

Avissar-Whiting M, Belliard F, Bertozzi SM, Brand A, Brown K, Clément-Stoneham G, Dawson S, Dey G, Ecer D, Edmunds SC, Farley A, Fischer TD, Franko M, Fraser JS, Funk K, Ganier C, Harrison M, Hatch A, Hazlett H, Hindle S, Hook DW, Hurst P, Kamoun S, Kiley R, Lacy MM, LaFlamme M, Lawrence R, Lemberger T, Leptin M, Lumb E, MacCallum CJ, Marcum CS, Marinello G, Mendonça A, Monaco S, Neves K, Pattinson D, Polka JK, Puebla I, Rittman M, Royle SJ, Saderi D, Sever R, Shearer K, Spiro JE, Stern B, Taraborelli D, Vale R, Vasquez CG, Waltman L, Watt FM, Weinberg ZY, Williams M

PLoS biology, 2024

doi:10.1371/journal.pbio.3002502.

Spindle architecture constrains karyotype in budding yeast.

Helsen J, Reza MH, Sherlock G, Dey G

bioRxiv, 2023

doi:10.1101/2023.10.25.563899.

A diffusion barrier limits nuclear leaks.

Shah H, Dey G

Nature cell biology, 2023

doi:10.1038/s41556-023-01243-4.

Experimental evolution for cell biology.

Helsen J, Sherlock G, Dey G

Trends in cell biology, 2023

doi:10.1016/j.tcb.2023.04.006.

Microtubule-mitochondrial attachment facilitates cell division symmetry and mitochondrial partitioning in fission yeast.

Chacko LA, Mikus F, Ariotti N, Dey G, Ananthanarayanan V

Journal of cell science, 2023

doi:10.1242/jcs.260705.

Ultrastructure expansion microscopy reveals the cellular architecture of budding and fission yeast.

Hinterndorfer K, Laporte MH, Mikus F, Tafur L, Bourgoint C, Prouteau M, Dey G, Loewith R, Guichard P, Hamel V

Journal of cell science, 2022

doi:10.1242/jcs.260240.

Preprint Highlight: Growth temperature is the principal driver of chromatinization in archaea.

Dey G

Molecular biology of the cell, 2022

doi:10.1091/mbc.P22-02-1007.

Tracking changes between preprint posting and journal publication during a pandemic.

Brierley L, Nanni F, Polka JK, Dey G, Pálfy M, Fraser N, Coates JA

PLoS biology, 2022

doi:10.1371/journal.pbio.3001285.

Nuclear size and shape control.

Cantwell H, Dey G

Seminars in cell & developmental biology, 2021

doi:10.1016/j.semcdb.2021.10.013.

The evolving role of preprints in the dissemination of COVID-19 research and their impact on the science communication landscape.

Fraser N, Brierley L, Dey G, Polka JK, Pálfy M, Nanni F, Coates JA

PLoS biology, 2021

doi:10.1371/journal.pbio.3000959.

Nuclear envelope remodelling during mitosis.

Dey G, Baum B

Current opinion in cell biology, 2021

doi:10.1016/j.ceb.2020.12.004.

Moving simply: Naegleria crawls and feeds using an ancient Arp2/3-dependent mechanism.

Baum B, Dey G

The Journal of cell biology, 2020

doi:10.1083/jcb.202009031.

Closed mitosis requires local disassembly of the nuclear envelope.

Dey G, Culley S, Curran S, Schmidt U, Henriques R, Kukulski W, Baum B

Nature, 2020

doi:10.1038/s41586-020-2648-3.

The proteasome controls ESCRT-III–mediated cell division in an archaeon.

Risa GT, Hurtig F, Bray S, Hafner AE, Harker-Kirschneck L, Faull P, Davis C, Papatziamou D, Mutavchiev DR, Fan C, Meneguello L, Pulschen AA, Dey G, Culley S, Kilkenny M, Souza DP, Pellegrini L, de Bruin RAM, Henriques R, Snijders AP, Šarić A, Lindås A-C, Robinson NP, Baum B

2020

doi:10.1126/science.aaz2532.

Science during lockdown – from virtual seminars to sustainable online communities.

Bottanelli F, Cadot B, Campelo F, Curran S, Davidson PM, Dey G, Raote I, Straube A, Swaffer MP

2020

doi:10.1242/jcs.249607.

Live imaging of a hyperthermophilic archaeon reveals distinct roles for two ESCRT-III homologs in ensuring a robust and symmetric division.

Pulschen AA, Mutavchiev DR, Culley S, Sebastian KN, Roubinet J, Roubinet M, Risa GT, van Wolferen M, Roubinet C, Schmidt U, Dey G, Albers SV, Henriques R, Baum B

Current biology : CB, 2020

doi:10.1016/j.cub.2020.05.021.

Preprinting a pandemic: the role of preprints in the COVID-19 pandemic.

Fraser, N, Brierly L, Dey G, Polka J, Palfy M, Coates JA

2020

doi:10.1101/2020.05.22.111294.

Live cell imaging of the hyperthermophilic archaeon Sulfolobus acidocaldarius identifies complementary roles for two ESCRTIII homologues in ensuring a robust and symmetric cell division.

Pulschen AA, Mutavchiev DR, Sebastian KN, Roubinet J, Roubinet M, Risa GT, Wolferen M, Roubinet C, Culley S, Dey G, Albers S-V, Henriques R, Baum B

2020

doi:10.1101/2020.02.18.953042.

The lysosomal GPCR-like protein GPR137B regulates Rag and mTORC1 localization and activity.

Gan L, Seki A, Shen K, Iyer H, Han K, Hayer A, Wollman R, Ge X, Lin JR, Dey G, Talbot WS, Meyer T

Nature cell biology, 2019

doi:10.1038/s41556-019-0321-6.

Proteasome-mediated protein degradation resets the cell division cycle and triggers ESCRT-III-mediated cytokinesis in an archaeon.

Risa G, Hurtig F, Bray S, Hafner AE, Harker-Kirschneck L, Faull P, Davis C, Papatziamou D, Mutavchiev D, Fan C, Meneguello L, Pulschen A, Dey G, Culley S, Kilkenny M, Pellegrini L, de Bruin RAM, Henriques R, Snijders AP, Šarić A, Lindås A-C, Robinson N, Baum B

2019

doi:10.1101/774273.

Origin of eukaryotes.

Dey G, Baum B, Baum DA

2018

doi:10.1093/OBO/9780199941728-0108.

On the archaeal origins of eukaryotes and the challenges of inferring phenotype from genotype.

Dey G, Thattai M, Baum B

Trends in cell biology, 2016

doi:10.1016/j.tcb.2016.03.009.

A method to rapidly create protein aggregates in living cells.

Miyazaki Y, Mizumoto K, Dey G, Kudo T, Perrino J, Chen LC, Meyer T, Wandless TJ

Nature communications, 2016

doi:10.1038/ncomms11689.

Phylogenetic profiling for probing the modular architecture of the human genome.

Dey G, Meyer T

Cell systems, 2015

doi:10.1016/j.cels.2015.08.006.

Systematic discovery of human gene function and principles of modular organization through phylogenetic profiling.

Dey G, Jaimovich A, Collins SR, Seki A, Meyer T

Cell reports, 2015

doi:10.1016/j.celrep.2015.01.025.

Population distribution analyses reveal a hierarchy of molecular players underlying parallel endocytic pathways.

Gupta GD, Dey G, Swetha MG, Ramalingam B, Shameer K, Thottacherry JJ, Kalappurakkal JM, Howes MT, Chandran R, Das A, Menon S, Parton RG, Sowdhamini R, Thattai M, Mayor S

PloS one, 2014

doi:10.1371/journal.pone.0100554.

Exploiting cell-to-cell variability to detect cellular perturbations.

Dey G, Gupta GD, Ramalingam B, Sathe M, Mayor S, Thattai M

PloS one, 2014

doi:10.1371/journal.pone.0090540.

Parallel measurement of dynamic changes in translation rates in single cells.

Han K, Jaimovich A, Dey G, Ruggero D, Meyuhas O, Sonenberg N, Meyer T

Nature methods, 2014

doi:10.1038/nmeth.2729.

Survival strategies of a sterol auxotroph.

Carvalho M, Schwudke D, Sampaio JL, Palm W, Riezman I, Dey G, Gupta GD, Mayor S, Riezman H, Shevchenko A, Kurzchalia TV, Eaton S

Development (Cambridge, England), 2010

doi:10.1242/dev.044560.

Analysis of endocytic pathways in Drosophila cells reveals a conserved role for GBF1 in internalization via GEECs.

Gupta GD, Swetha MG, Kumari S, Lakshminarayan R, Dey G, Mayor S

PloS one, 2009

doi:10.1371/journal.pone.0006768.