Targeted volume correlative light and electron microscopy of an environmental marine microorganism.

Mocaer K, Mizzon G, Gunkel M, Halavatyi A, Steyer A, Oorschot V, Schorb M, Le Kieffre C, Yee DP, Chevalier F, Gallet B, Decelle J, Schwab Y, Ronchi P

Journal of cell science, 2023

doi:10.1242/jcs.261355.

HURP localization in metaphase is the result of a multi-step process requiring its phosphorylation at Ser627 residue.

Didaskalou S, Efstathiou C, Galtsidis S, Kesisova I, Halavatyi A, Elmali T, Tsolou A, Girod A, Koffa M

Frontiers in cell and developmental biology, 2023

doi:10.3389/fcell.2023.981425.

RNA polymerase II depletion from the inactive X chromosome territory is not mediated by physical compartmentalization.

Collombet S, Rall I, Dugast-Darzacq C, Heckert A, Halavatyi A, Le Saux A, Dailey G, Darzacq X, Heard E

Nature structural & molecular biology, 2023

doi:10.1038/s41594-023-01008-5.

Regulation of the COPII secretory machinery via focal adhesions and extracellular matrix signaling.

Jung J, Khan MM, Landry J, Halavatyi A, Machado P, Reiss M, Pepperkok R

The Journal of cell biology, 2022

doi:10.1083/jcb.202110081.

Strength of interactions in the Notch gene regulatory network determines patterning and fate in the notochord.

Sánchez-Iranzo H, Halavatyi A, Diz-Muñoz A

eLife, 2022

doi:10.7554/elife.75429.

Nuclear pores dilate and constrict in cellulo.

Zimmerli CE, Allegretti M, Rantos V, Goetz SK, Obarska-Kosinska A, Zagoriy I, Halavatyi A, Hummer G, Mahamid J, Kosinski J, Beck M

Science (New York, N.Y.), 2021

doi:10.1126/science.abd9776.

Pairwise effects between lipid GWAS genes modulate lipid plasma levels and cellular uptake.

Zimoń M, Huang Y, Trasta A, Halavatyi A, Liu JZ, Chen CY, Blattmann P, Klaus B, Whelan CD, Sexton D, John S, Huber W, Tsai EA, Pepperkok R, Runz H

Nature communications, 2021

doi:10.1038/s41467-021-26761-3.

An open-source semi-automated robotics pipeline for embryo immunohistochemistry.

Fuqua T, Jordan J, Halavatyi A, Tischer C, Richter K, Crocker J

Scientific reports, 2021

doi:10.1038/s41598-021-89676-5.

Glucocorticoids exacerbate TGFß1 mediated fibrotic signalling in lung fibroblasts by inhibition of metalloproteinase expression and activity.

Khan MM, Zukowska-Kasprzyk J, Neumann B, Halavatyi A, Tischer C, Haberkant P, Stein F, Jung F, Landry J, Lewis J, Pepperkok R

ERJ open research, 2021

doi:10.1183/23120541.lsc-2021.33.

A high throughput SEC23 functional interaction screen reveals a role for focal adhesion and extracellular matrix signalling in the regulation of COPII subunit SEC23A

Jung J, Khan MM, Landry J, Halavatyi A, Machado P, Reiss M, Pepperkok R

2021

doi:10.1101/2021.03.16.435679.

An integrated multiomic and quantitative label-free microscopy-based approach to study pro-fibrotic signalling in ex vivo human precision-cut lung slices.

Khan MM, Poeckel D, Halavatyi A, Zukowska-Kasprzyk J, Stein F, Vappiani J, Sevin DC, Tischer C, Zinn N, Eley JD, Gudmann NS, Muley T, Winter H, Fisher AJ, Nanthakumar CB, Bergamini G, Pepperkok R

The European respiratory journal, 2020

doi:10.1183/13993003.00221-2020.

Dense and pleiotropic regulatory information in a developmental enhancer.

Fuqua T, Jordan J, van Breugel ME, Halavatyi A, Tischer C, Polidoro P, Abe N, Tsai A, Mann RS, Stern DL, Crocker J

Nature, 2020

doi:10.1038/s41586-020-2816-5.

A solid-phase transfection platform for arrayed CRISPR screens.

Serçin Ö, Reither S, Roidos P, Ballin N, Palikyras S, Baginska A, Rein K, Llamazares M, Halavatyi A, Winter H, Muley T, Jurkowska RZ, Abdollahi A, Zenke FT, Neumann B, Mardin BR

Molecular systems biology, 2019

doi:10.15252/msb.20198983.

FRAP and other photoperturbation techniques.

Halavatyi A, Terjung S

2017

doi:10.1002/9781119096948.ch5.

Measuring molecular dynamics and interactions by Förster Resonance Energy Transfer (FRET).

Halavatyi A, Terjung S

2017

doi:10.1002/9781119096948.ch4.

A microtubule-independent role of p150glued in secretory cargo concentration at endoplasmic reticulum exit sites.

Verissimo F, Halavatyi A, Pepperkok R, Weiss M

Journal of cell science, 2015

doi:10.1242/jcs.172395.