Omenn GS, Lane L, Overall CM, Lindskog C, Pineau C, Packer NH, Cristea IM, Weintraub ST, Orchard S, Roehrl MHA, Nice E, Guo T, Van Eyk JE, Liu S, Bandeira N, Aebersold R, Moritz RL, Deutsch EW.
J Proteome Res,
2024
doi:10.1021/acs.jproteome.3c00591.
Simona P, Panneerselvam K, Porras P, Duesbury M, Perfetto L, Licata L, Hermjakob H, Orchard S.
Database (Oxford),
2023
doi:10.1093/database/baad066.
Mészáros B, Hatos A, Palopoli N, Quaglia F, Salladini E, Van Roey K, Arthanari H, Dosztányi Z, Felli IC, Fischer PD, Hoch JC, Jeffries CM, Longhi S, Maiani E, Orchard S, Pancsa R, Papaleo E, Pierattelli R, Piovesan D, Pritisanac I, Tenorio L, Viennet T, Tompa P, Vranken W, Tosatto SCE, Davey NE.
Nat Methods,
2023
doi:10.1038/s41592-023-01915-x.
Simona P, Panneerselvam K, Porras P, Duesbury M, Perfetto L, Licata L, Hermjakob H, Orchard S.
2023
doi:10.1101/2023.06.20.545695.
Bowler-Barnett EH, Fan J, Luo J, Magrane M, Martin MJ, Orchard S, UniProt Consortium.
Mol Cell Proteomics,
2023
doi:10.1016/j.mcpro.2023.100591.
Zaru R, Orchard S, UniProt Consortium.
Curr Protoc,
2023
doi:10.1002/cpz1.697.
Lussi YC, Magrane M, Martin MJ, Orchard S, UniProt Consortium.
Curr Protoc,
2023
doi:10.1002/cpz1.700.
Gene Ontology Consortium, Aleksander SA, Balhoff J, Carbon S, Cherry JM, Drabkin HJ, Ebert D, Feuermann M, Gaudet P, Harris NL, Hill DP, Lee R, Mi H, Moxon S, Mungall CJ, Muruganugan A, Mushayahama T, Sternberg PW, Thomas PD, Van Auken K, Ramsey J, Siegele DA, Chisholm RL, Fey P, Aspromonte MC, Nugnes MV, Quaglia F, Tosatto S, Giglio M, Nadendla S, Antonazzo G, Attrill H, Dos Santos G, Marygold S, Strelets V, Tabone CJ, Thurmond J, Zhou P, Ahmed SH, Asanitthong P, Luna Buitrago D, Erdol MN, Gage MC, Ali Kadhum M, Li KYC, Long M, Michalak A, Pesala A, Pritazahra A, Saverimuttu SCC, Su R, Thurlow KE, Lovering RC, Logie C, Oliferenko S, Blake J, Christie K, Corbani L, Dolan ME, Drabkin HJ, Hill DP, Ni L, Sitnikov D, Smith C, Cuzick A, Seager J, Cooper L, Elser J, Jaiswal P, Gupta P, Jaiswal P, Naithani S, Lera-Ramirez M, Rutherford K, Wood V, De Pons JL, Dwinell MR, Hayman GT, Kaldunski ML, Kwitek AE, Laulederkind SJF, Tutaj MA, Vedi M, Wang SJ, D'Eustachio P, Aimo L, Axelsen K, Bridge A, Hyka-Nouspikel N, Morgat A, Aleksander SA, Cherry JM, Engel SR, Karra K, Miyasato SR, Nash RS, Skrzypek MS, Weng S, Wong ED, Bakker E, Berardini TZ, Reiser L, Auchincloss A, Axelsen K, Argoud-Puy G, Blatter MC, Boutet E, Breuza L, Bridge A, Casals-Casas C, Coudert E, Estreicher A, Livia Famiglietti M, Feuermann M, Gos A, Gruaz-Gumowski N, Hulo C, Hyka-Nouspikel N, Jungo F, Le Mercier P, Lieberherr D, Masson P, Morgat A, Pedruzzi I, Pourcel L, Poux S, Rivoire C, Sundaram S, Bateman A, Bowler-Barnett E, Bye-A-Jee H, Denny P, Ignatchenko A, Ishtiaq R, Lock A, Lussi Y, Magrane M, Martin MJ, Orchard S, Raposo P, Speretta E, Tyagi N, Warner K, Zaru R, Diehl AD, Lee R, Chan J, Diamantakis S, Raciti D, Zarowiecki M, Fisher M, James-Zorn C, Ponferrada V, Zorn A, Ramachandran S, Ruzicka L, Westerfield M.
Genetics,
2023
doi:10.1093/genetics/iyad031.
Barrio-Hernandez I, Schwartzentruber J, Shrivastava A, Del-Toro N, Gonzalez A, Zhang Q, Mountjoy E, Suveges D, Ochoa D, Ghoussaini M, Bradley G, Hermjakob H, Orchard S, Dunham I, Anderson CA, Porras P, Beltrao P.
Nat Genet,
2023
doi:10.1038/s41588-023-01327-9.
Deutsch EW, Vizcaíno JA, Jones AR, Binz PA, Lam H, Klein J, Bittremieux W, Perez-Riverol Y, Tabb DL, Walzer M, Ricard-Blum S, Hermjakob H, Neumann S, Mak TD, Kawano S, Mendoza L, Van Den Bossche T, Gabriels R, Bandeira N, Carver J, Pullman B, Sun Z, Hoffmann N, Shofstahl J, Zhu Y, Licata L, Quaglia F, Tosatto SCE, Orchard SE.
J Proteome Res,
2023
doi:10.1021/acs.jproteome.2c00637.
Coudert E, Gehant S, de Castro E, Pozzato M, Baratin D, Neto T, Sigrist CJA, Redaschi N, Bridge A, UniProt Consortium.
Bioinformatics,
2023
doi:10.1093/bioinformatics/btac793.
Thakur M, Bateman A, Brooksbank C, Freeberg M, Harrison M, Hartley M, Keane T, Kleywegt G, Leach A, Levchenko M, Morgan S, McDonagh EM, Orchard S, Papatheodorou I, Velankar S, Vizcaino JA, Witham R, Zdrazil B, McEntyre J.
Nucleic Acids Res,
2023
doi:10.1093/nar/gkac1098.
UniProt Consortium.
Nucleic Acids Res,
2023
doi:10.1093/nar/gkac1052.
Omenn GS, Lane L, Overall CM, Pineau C, Packer NH, Cristea IM, Lindskog C, Weintraub ST, Orchard S, Roehrl MHA, Nice E, Liu S, Bandeira N, Chen YJ, Guo T, Aebersold R, Moritz RL, Deutsch EW.
J Proteome Res,
2023
doi:10.1021/acs.jproteome.2c00498.
Mészáros B, Hatos A, Palopoli N, Quaglia F, Salladini E, Van Roey K, Arthanari H, Dosztányi Z, Felli IC, Fischer PD, Hoch JC, Jeffries CM, Longhi S, Maiani E, Orchard S, Pancsa R, Papaleo E, Pierattelli R, Piovesan D, Pritisanac I, Viennet T, Tompa P, Vranken W, Tosatto SC, Davey NE.
2022
doi:10.1101/2022.07.12.495092.
Porras P, Orchard S, Licata L.
Methods Mol Biol,
2022
doi:10.1007/978-1-0716-2095-3_2.
Del Toro N, Shrivastava A, Ragueneau E, Meldal B, Combe C, Barrera E, Perfetto L, How K, Ratan P, Shirodkar G, Lu O, Mészáros B, Watkins X, Pundir S, Licata L, Iannuccelli M, Pellegrini M, Martin MJ, Panni S, Duesbury M, Vallet SD, Rappsilber J, Ricard-Blum S, Cesareni G, Salwinski L, Orchard S, Porras P, Panneerselvam K, Hermjakob H.
Nucleic Acids Res,
2022
doi:10.1093/nar/gkab1006.
Kuiper M, Bonello J, Fernández-Breis JT, Bucher P, Futschik ME, Gaudet P, Kulakovskiy IV, Licata L, Logie C, Lovering RC, Makeev VJ, Orchard S, Panni S, Perfetto L, Sant D, Schulz S, Vercruysse S, Zerbino DR, Lægreid A, GRECO Consortium.
Biochim Biophys Acta Gene Regul Mech,
2022
doi:10.1016/j.bbagrm.2021.194768.
Meldal BHM, Perfetto L, Combe C, Lubiana T, Ferreira Cavalcante JV, Bye-A-Jee H, Waagmeester A, Del-Toro N, Shrivastava A, Barrera E, Wong E, Mlecnik B, Bindea G, Panneerselvam K, Willighagen E, Rappsilber J, Porras P, Hermjakob H, Orchard S.
Nucleic Acids Res,
2022
doi:10.1093/nar/gkab991.
Zaru R, Onwubiko J, Ribeiro AJM, Cochrane K, Tyzack JD, Muthukrishnan V, Pravda L, Thornton JM, O'Donovan C, Velanker S, Orchard S, Leach A, Martin MJ.
FEBS J,
2022
doi:10.1111/febs.16168.
Avles R, Burdett T, Levchenko M, Orchard S, Swan A.
2021
doi:10.6019/tol.openaccessdiscussion-w.2021.00001.1.
Saverimuttu SCC, Kramarz B, Rodríguez-López M, Garmiri P, Attrill H, Thurlow KE, Makris M, de Miranda Pinheiro S, Orchard S, Lovering RC.
Database (Oxford),
2021
doi:10.1093/database/baab067.
Velthuijs N, Meldal B, Geessinck Q, Porras P, Medvedeva Y, Zubritskiy A, Orchard S, Logie C.
Biochim Biophys Acta Gene Regul Mech,
2021
doi:10.1016/j.bbagrm.2021.194749.
Barrio-Hernandez I, Schwartzentruber J, Shrivastava A, del-Toro N, Zhang Q, Bradley G, Hermjakob H, Orchard S, Dunham I, Anderson CA, Porras P, Beltrao P.
2021
doi:10.1101/2021.07.19.452924.
MacDougall A, Volynkin V, Saidi R, Poggioli D, Zellner H, Hatton-Ellis E, Joshi V, O'Donovan C, Orchard S, Auchincloss AH, Baratin D, Bolleman J, Coudert E, de Castro E, Hulo C, Masson P, Pedruzzi I, Rivoire C, Arighi C, Wang Q, Chen C, Huang H, Garavelli J, Vinayaka CR, Yeh LS, Natale DA, Laiho K, Martin MJ, Renaux A, Pichler K, The UniProt Consortium.
Bioinformatics,
2021
doi:10.1093/bioinformatics/btaa663.
Meldal BHM, Pons C, Perfetto L, Del-Toro N, Wong E, Aloy P, Hermjakob H, Orchard S, Porras P.
Nucleic Acids Res,
2021
doi:10.1093/nar/gkab077.
Gene Ontology Consortium.
Nucleic Acids Res,
2021
doi:10.1093/nar/gkaa1113.
UniProt Consortium.
Nucleic Acids Res,
2021
doi:10.1093/nar/gkaa1100.
Touré V, Vercruysse S, Acencio ML, Lovering RC, Orchard S, Bradley G, Casals-Casas C, Chaouiya C, Del-Toro N, Flobak Å, Gaudet P, Hermjakob H, Hoyt CT, Licata L, Lægreid A, Mungall CJ, Niknejad A, Panni S, Perfetto L, Porras P, Pratt D, Saez-Rodriguez J, Thieffry D, Thomas PD, Türei D, Kuiper M.
Bioinformatics,
2021
doi:10.1093/bioinformatics/btaa622.
Porras P, Barrera E, Bridge A, Del-Toro N, Cesareni G, Duesbury M, Hermjakob H, Iannuccelli M, Jurisica I, Kotlyar M, Licata L, Lovering RC, Lynn DJ, Meldal B, Nanduri B, Paneerselvam K, Panni S, Pastrello C, Pellegrini M, Perfetto L, Rahimzadeh N, Ratan P, Ricard-Blum S, Salwinski L, Shirodkar G, Shrivastava A, Orchard S.
Nat Commun,
2020
doi:10.1038/s41467-020-19942-z.
Perfetto L, Pastrello C, Del-Toro N, Duesbury M, Iannuccelli M, Kotlyar M, Licata L, Meldal B, Panneerselvam K, Panni S, Rahimzadeh N, Ricard-Blum S, Salwinski L, Shrivastava A, Cesareni G, Pellegrini M, Orchard S, Jurisica I, Hermjakob H, Porras P.
Database (Oxford),
2020
doi:10.1093/database/baaa096.
Meldal BHM, Pons C, Perfetto L, Del-Toro N, Wong E, Aloy P, Hermjakob H, Orchard S, Porras P.
2020
doi:10.1101/2020.11.03.367086.
Breuza L, Arighi CN, Argoud-Puy G, Casals-Casas C, Estreicher A, Famiglietti ML, Georghiou G, Gos A, Gruaz-Gumowski N, Hinz U, Hyka-Nouspikel N, Kramarz B, Lovering RC, Lussi Y, Magrane M, Masson P, Perfetto L, Poux S, Rodriguez-Lopez M, Stoeckert C, Sundaram S, Wang LS, Wu E, Orchard S, IMEx Consortium, UniProt Consortium.
J Alzheimers Dis,
2020
doi:10.3233/jad-200206.
Perfetto L, Pastrello C, Del-Toro N, Duesbury M, Iannuccelli M, Kotlyar M, Licata L, Meldal B, Panneerselvam K, Panni S, Rahimzadeh N, Ricard-Blum S, Salwinski L, Shrivastava A, Cesareni G, Pellegrini M, Orchard S, Jurisica I, Hermjakob H, Porras P.
2020
doi:10.1101/2020.06.16.153817.
Kramarz B, Huntley RP, Rodríguez-López M, Roncaglia P, Saverimuttu SCC, Parkinson H, Bandopadhyay R, Martin MJ, Orchard S, Hooper NM, Brough D, Lovering RC.
J Alzheimers Dis,
2020
doi:10.3233/jad-200207.
MacDougall A, Volynkin V, Saidi R, Poggioli D, Zellner H, Hatton-Ellis E, Joshi V, O'Donovan C, Orchard S, Auchincloss AH, Baratin D, Bolleman J, Coudert E, de Castro E, Hulo C, Masson P, Pedruzzi I, Rivoire C, Arighi C, Wang Q, Chen C, Huang H, Garavelli J, Vinayaka CR, Yeh LS, Natale DA, Laiho K, Martin MJ, Renaux A, Pichler K, UniProt Consortium.
Bioinformatics,
2020
doi:10.1093/bioinformatics/btaa485.
Touré V, Vercruysse S, Acencio ML, Lovering R, Orchard S, Bradley G, Casals-Casas C, Chaouiya C, del-Toro N, Flobak Å, Gaudet P, Hermjakob H, Licata L, Lægreid A, Mungall C, Niknejad A, Panni S, Perfetto L, Porras P, Pratt D, Thieffry D, Thomas P, Türei D, Saez-Rodriguez J, Kuiper M.
2020
doi:10.20944/preprints202004.0480.v1.
Drysdale R, Cook CE, Petryszak R, Baillie-Gerritsen V, Barlow M, Gasteiger E, Gruhl F, Haas J, Lanfear J, Lopez R, Redaschi N, Stockinger H, Teixeira D, Venkatesan A, Elixir Core Data Resource Forum, Blomberg N, Durinx C, McEntyre J.
Bioinformatics,
2020
doi:10.1093/bioinformatics/btz959.
Bye-A-Jee H, Zaru R, Magrane M, Orchard S, UniProt Consortium.
FEBS J,
2020
doi:10.1111/febs.15213.
Zaru R, Magrane M, Orchard S, UniProt Consortium.
FEBS J,
2020
doi:10.1111/febs.15100.
Panni S, Lovering RC, Porras P, Orchard S.
Biochim Biophys Acta Gene Regul Mech,
2020
doi:10.1016/j.bbagrm.2019.194417.
Davey NE, Babu MM, Blackledge M, Bridge A, Capella-Gutierrez S, Dosztanyi Z, Drysdale R, Edwards RJ, Elofsson A, Felli IC, Gibson TJ, Gutmanas A, Hancock JM, Harrow J, Higgins D, Jeffries CM, Le Mercier P, Mészáros B, Necci M, Notredame C, Orchard S, Ouzounis CA, Pancsa R, Papaleo E, Pierattelli R, Piovesan D, Promponas VJ, Ruch P, Rustici G, Romero P, Sarntivijai S, Saunders G, Schuler B, Sharan M, Shields DC, Sussman JL, Tedds JA, Tompa P, Turewicz M, Vondrasek J, Vranken WF, Wallace BA, Wichapong K, Tosatto SCE.
F1000Res,
2019
doi:10.12688/f1000research.20136.1.
Davey NE, Babu MM, Blackledge M, Bridge A, Capella-Gutierrez S, Dosztanyi Z, Drysdale R, Edwards RJ, Elofsson A, Felli IC, Gibson TJ, Gutmanas A, Hancock JM, Harrow J, Higgins D, Jeffries CM, Le Mercier P, Mészáros B, Necci M, Notredame C, Orchard S, Ouzounis CA, Pancsa R, Papaleo E, Pierattelli R, Piovesan D, Promponas VJ, Ruch P, Rustici G, Romero P, Sarntivijai S, Saunders G, Schuler B, Sharan M, Shields DC, Sussman JL, Tedds JA, Tompa P, Turewicz M, Vondrasek J, Vranken WF, Wallace BA, Wichapong K, Tosatto SCE.
2019
doi:10.12688/f1000research.20136.1.
Deutsch EW, Lane L, Overall CM, Bandeira N, Baker MS, Pineau C, Moritz RL, Corrales F, Orchard S, Van Eyk JE, Paik YK, Weintraub ST, Vandenbrouck Y, Omenn GS.
J Proteome Res,
2019
doi:10.1021/acs.jproteome.9b00542.
Garcia L, Bolleman J, Gehant S, Redaschi N, Martin M, UniProt Consortium.
Sci Data,
2019
doi:10.1038/s41597-019-0180-9.
Ribeiro AJM, Das S, Dawson N, Zaru R, Orchard S, Thornton JM, Orengo C, Zeqiraj E, Murphy JM, Eyers PA.
Sci Signal,
2019
doi:10.1126/scisignal.aat9797.
Deutsch EW, Lane L, Overall CM, Bandeira N, Baker MS, Pineau C, Moritz RL, Corrales F, Orchard S, Van Eyk JE, Paik Y, Weintraub ST, Vandenbrouck Y, Omenn GS.
2019
doi:10.1101/733576.
IMEx Consortium contributing authors, Del-Toro N, Duesbury M, Koch M, Perfetto L, Shrivastava A, Ochoa D, Wagih O, Piñero J, Kotlyar M, Pastrello C, Beltrao P, Furlong LI, Jurisica I, Hermjakob H, Orchard S, Porras P.
Nat Commun,
2019
doi:10.1038/s41467-019-08814-w.
Perfetto L, Acencio ML, Bradley G, Cesareni G, Del Toro N, Fazekas D, Hermjakob H, Korcsmaros T, Kuiper M, Lægreid A, Lo Surdo P, Lovering RC, Orchard S, Porras P, Thomas PD, Touré V, Zobolas J, Licata L.
Bioinformatics,
2019
doi:10.1093/bioinformatics/btz132.
Wong ED, Skrzypek MS, Weng S, Binkley G, Meldal BHM, Perfetto L, Orchard SE, Engel SR, Cherry JM, SGD Project.
Database (Oxford),
2019
doi:10.1093/database/baz008.
IMEx Consortium Curators, Del-Toro N, Duesbury M, Koch M, Koch M, Perfetto L, Shrivastava A, Ochoa D, Wagih O, Piñero J, Kotlyar M, Pastrello C, Beltrao P, Furlong LI, Jurisica I, Hermjakob H, Hermjakob H, Orchard S, Porras P.
Nat Commun,
2019
doi:10.1038/s41467-018-07709-6.
The Gene Ontology Consortium.
Nucleic Acids Res,
2019
doi:10.1093/nar/gky1055.
UniProt Consortium.
Nucleic Acids Res,
2019
doi:10.1093/nar/gky1049.
Meldal BHM, Bye-A-Jee H, Gajdoš L, Hammerová Z, Horácková A, Melicher F, Perfetto L, Pokorný D, Lopez MR, Türková A, Wong ED, Xie Z, Casanova EB, Del-Toro N, Koch M, Porras P, Hermjakob H, Orchard S.
Nucleic Acids Res,
2019
doi:10.1093/nar/gky1001.
Kramarz B, Roncaglia P, Meldal BHM, Huntley RP, Martin MJ, Orchard S, Parkinson H, Brough D, Bandopadhyay R, Hooper NM, Lovering RC.
Genes (Basel),
2018
doi:10.3390/genes9120593.
Perfetto L, Acencio M, Bradley G, Cesareni G, Toro N, Fazekas D, Hermjakob H, Korcsmaros T, Kuiper M, Lægreid A, Surdo PL, Lovering R, Orchard S, Porras P, Thomas P, Touré V, Zobolas J, Licata L.
2018
doi:10.1101/385773.
Griffin PC, Khadake J, LeMay KS, Lewis SE, Orchard S, Pask A, Pope B, Roessner U, Russell K, Seemann T, Treloar A, Tyagi S, Christiansen JH, Dayalan S, Gladman S, Hangartner SB, Hayden HL, Ho WW, Keeble-Gagnère G, Korhonen PK, Neish P, Prestes PR, Richardson MF, Watson-Haigh NS, Wyres KL, Young ND, Schneider MV.
2018
doi:10.12688/f1000research.12344.2.
Sansone S, McQuilton P, Rocca-Serra P, Gonzalez-Beltran A, Izzo M, Lister AL, Thurston M, And the FAIRsharing community (https://fairsharing.org/communities):.
2018
doi:10.1101/245183.
The IMEx Consortium Curators, del Toro N, Duesbury M, Koch M, Perfetto L, Shrivastava A, Ochoa D, Wagih O, Piñero J, Kotlyar M, Pastrello C, Beltrao P, Furlong L, Jurisica I, Hermjakob H, Orchard S, Porras P.
2018
doi:10.1101/346833.
International Society for Biocuration.
PLoS Biol,
2018
doi:10.1371/journal.pbio.2002846.
Sivade Dumousseau M, Koch M, Shrivastava A, Alonso-López D, De Las Rivas J, Del-Toro N, Combe CW, Meldal BHM, Heimbach J, Rappsilber J, Sullivan J, Yehudi Y, Orchard S.
BMC Bioinformatics,
2018
doi:10.1186/s12859-018-2119-0.
Sivade Dumousseau M, Alonso-López D, Ammari M, Bradley G, Campbell NH, Ceol A, Cesareni G, Combe C, De Las Rivas J, Del-Toro N, Heimbach J, Hermjakob H, Jurisica I, Koch M, Licata L, Lovering RC, Lynn DJ, Meldal BHM, Micklem G, Panni S, Porras P, Ricard-Blum S, Roechert B, Salwinski L, Shrivastava A, Sullivan J, Thierry-Mieg N, Yehudi Y, Van Roey K, Orchard S.
BMC Bioinformatics,
2018
doi:10.1186/s12859-018-2118-1.
Meldal BHM, Orchard S.
Methods Mol Biol,
2018
doi:10.1007/978-1-4939-7759-8_24.
Griffin PC, Khadake J, LeMay KS, Lewis SE, Orchard S, Pask A, Pope B, Roessner U, Russell K, Seemann T, Treloar A, Tyagi S, Christiansen JH, Dayalan S, Gladman S, Hangartner SB, Hayden HL, Ho WWH, Keeble-Gagnère G, Korhonen PK, Neish P, Prestes PR, Richardson MF, Watson-Haigh NS, Wyres KL, Young ND, Schneider MV.
F1000Res,
2017
doi:10.12688/f1000research.12344.2.
Combe CW, Sivade MD, Hermjakob H, Heimbach J, Meldal BHM, Micklem G, Orchard S, Rappsilber J.
Bioinformatics,
2017
doi:10.1093/bioinformatics/btx497.
Deutsch EW, Orchard S, Binz PA, Bittremieux W, Eisenacher M, Hermjakob H, Kawano S, Lam H, Mayer G, Menschaert G, Perez-Riverol Y, Salek RM, Tabb DL, Tenzer S, Vizcaíno JA, Walzer M, Jones AR.
J Proteome Res,
2017
doi:10.1021/acs.jproteome.7b00370.
Armstrong D, Burke M, Huerta L, Levchenko M, Mitchell A, Morgan S, Mugumbate G, Mutowo P, Orchard S, Perry E, Pundir S, Richardson L, Tang A.
2017
doi:10.6019/tol.treasure-t.2017.00001.1.
Griffin PC, Khadake J, LeMay KS, Lewis SE, Orchard S, Pask A, Pope B, Roessner U, Russell K, Seemann T, Treloar A, Tyagi S, Christiansen JH, Dayalan S, Gladman S, Hangartner SB, Hayden HL, Ho WWH, Keeble-Gagnère G, Korhonen PK, Neish P, Prestes PR, Richardson MF, Watson-Haigh NS, Wyres KL, Young ND, Schneider MV.
2017
doi:10.1101/167619.
Panni S, Prakash A, Bateman A, Orchard S.
RNA,
2017
doi:10.1261/rna.060996.117.
Wang Q, S Abdul S, Almeida L, Ananiadou S, Balderas-Martínez YI, Batista-Navarro R, Campos D, Chilton L, Chou HJ, Contreras G, Cooper L, Dai HJ, Ferrell B, Fluck J, Gama-Castro S, George N, Gkoutos G, Irin AK, Jensen LJ, Jimenez S, Jue TR, Keseler I, Madan S, Matos S, McQuilton P, Milacic M, Mort M, Natarajan J, Pafilis E, Pereira E, Rao S, Rinaldi F, Rothfels K, Salgado D, Silva RM, Singh O, Stefancsik R, Su CH, Subramani S, Tadepally HD, Tsaprouni L, Vasilevsky N, Wang X, Chatr-Aryamontri A, Laulederkind SJ, Matis-Mitchell S, McEntyre J, Orchard S, Pundir S, Rodriguez-Esteban R, Van Auken K, Lu Z, Schaeffer M, Wu CH, Hirschman L, Arighi CN.
Database (Oxford),
2016
doi:10.1093/database/baw119.
Tripathi S, Vercruysse S, Chawla K, Christie KR, Blake JA, Huntley RP, Orchard S, Hermjakob H, Thommesen L, Lægreid A, Kuiper M.
Database (Oxford),
2016
doi:10.1093/database/baw088.
Licata L, Orchard S.
Methods Mol Biol,
2016
doi:10.1007/978-1-4939-3572-7_3.
Lovering RC, Rodriguez-Lopez M, Campbell NH, Huntley RP, Sawford T, O’Donovan C, Orchard S, Hermjakob H, Martin M, Mayr M, Humphries SE, Talmud PJ.
Atherosclerosis,
2015
doi:10.1016/j.atherosclerosis.2015.04.135.
Bastian FB, Chibucos MC, Gaudet P, Giglio M, Holliday GL, Huang H, Lewis SE, Niknejad A, Orchard S, Poux S, Skunca N, Robinson-Rechavi M.
Database (Oxford),
2015
doi:10.1093/database/bav043.
Orchard S, Hermjakob H.
Database (Oxford),
2015
doi:10.1093/database/bav009.
Deutsch EW, Albar JP, Binz PA, Eisenacher M, Jones AR, Mayer G, Omenn GS, Orchard S, Vizcaíno JA, Hermjakob H.
J Am Med Inform Assoc,
2015
doi:10.1093/jamia/ocv001.
Porras P, Duesbury M, Fabregat A, Ueffing M, Orchard S, Gloeckner CJ, Hermjakob H.
Proteomics,
2015
doi:10.1002/pmic.201400390.
Villaveces JM, Jiménez RC, Porras P, Del-Toro N, Duesbury M, Dumousseau M, Orchard S, Choi H, Ping P, Zong NC, Askenazi M, Habermann BH, Hermjakob H.
Database (Oxford),
2015
doi:10.1093/database/bau131.
UniProt Consortium.
Nucleic Acids Res,
2015
doi:10.1093/nar/gku989.
Meldal BH, Forner-Martinez O, Costanzo MC, Dana J, Demeter J, Dumousseau M, Dwight SS, Gaulton A, Licata L, Melidoni AN, Ricard-Blum S, Roechert B, Skyzypek MS, Tiwari M, Velankar S, Wong ED, Hermjakob H, Orchard S.
Nucleic Acids Res,
2015
doi:10.1093/nar/gku975.
Orchard S, Albar JP, Binz PA, Kettner C, Jones AR, Salek RM, Vizcaino JA, Deutsch EW, Hermjakob H.
Proteomics,
2014
doi:10.1002/pmic.201470164.
Poux S, Magrane M, Arighi CN, Bridge A, O'Donovan C, Laiho K, UniProt Consortium.
Database (Oxford),
2014
doi:10.1093/database/bau016.
UniProt Consortium.
Nucleic Acids Res,
2014
doi:10.1093/nar/gkt1140.
Orchard S, Ammari M, Aranda B, Breuza L, Briganti L, Broackes-Carter F, Campbell NH, Chavali G, Chen C, del-Toro N, Duesbury M, Dumousseau M, Galeota E, Hinz U, Iannuccelli M, Jagannathan S, Jimenez R, Khadake J, Lagreid A, Licata L, Lovering RC, Meldal B, Melidoni AN, Milagros M, Peluso D, Perfetto L, Porras P, Raghunath A, Ricard-Blum S, Roechert B, Stutz A, Tognolli M, van Roey K, Cesareni G, Hermjakob H.
Nucleic Acids Res,
2014
doi:10.1093/nar/gkt1115.
Orchard S.
Biochim Biophys Acta,
2014
doi:10.1016/j.bbapap.2013.03.011.
Mayer G, Jones AR, Binz PA, Deutsch EW, Orchard S, Montecchi-Palazzi L, Vizcaíno JA, Hermjakob H, Oveillero D, Julian R, Stephan C, Meyer HE, Eisenacher M.
Biochim Biophys Acta,
2014
doi:10.1016/j.bbapap.2013.02.017.
Orchard S, Binz PA, Jones AR, Vizcaino JA, Deutsch EW, Hermjakob H.
Proteomics,
2013
doi:10.1002/pmic.201370166.
Van Roey K, Orchard S, Kerrien S, Dumousseau M, Ricard-Blum S, Hermjakob H, Gibson TJ.
Database (Oxford),
2013
doi:10.1093/database/bat066.
del-Toro N, Dumousseau M, Orchard S, Jimenez RC, Galeota E, Launay G, Goll J, Breuer K, Ono K, Salwinski L, Hermjakob H.
Nucleic Acids Res,
2013
doi:10.1093/nar/gkt392.
Mayer G, Montecchi-Palazzi L, Ovelleiro D, Jones AR, Binz PA, Deutsch EW, Chambers M, Kallhardt M, Levander F, Shofstahl J, Orchard S, Vizcaíno JA, Hermjakob H, Stephan C, Meyer HE, Eisenacher M, HUPO-PSI Group.
Database (Oxford),
2013
doi:10.1093/database/bat009.
Gómez J, García LJ, Salazar GA, Villaveces J, Gore S, García A, Martín MJ, Launay G, Alcántara R, Del-Toro N, Dumousseau M, Orchard S, Velankar S, Hermjakob H, Zong C, Ping P, Corpas M, Jiménez RC.
Bioinformatics,
2013
doi:10.1093/bioinformatics/btt100.
Orchard S.
2012
doi:10.6019/tol.inta-t.2012.00001.1.
Orchard S, Al-Lazikani B, Bryant S, Clark D, Calder E, Dix I, Engkvist O, Forster M, Gaulton A, Gilson M, Glen R, Grigorov M, Hammond-Kosack K, Harland L, Hopkins A, Larminie C, Lynch N, Mann RK, Murray-Rust P, Piparo EL, Southan C, Steinbeck C, Wishart D, Hermjakob H, Overington J, Thornton J.
Nat Rev Drug Discov,
2012
doi:10.1038/nrd3503-c2.
Orchard S, Binz PA, Borchers C, Gilson MK, Jones AR, Nicola G, Vizcaino JA, Deutsch EW, Hermjakob H.
Proteomics,
2012
doi:10.1002/pmic.201270126.
Orchard S.
Proteomics,
2012
doi:10.1002/pmic.201100484.
Orchard S, Kerrien S, Abbani S, Aranda B, Bhate J, Bidwell S, Bridge A, Briganti L, Brinkman FS, Cesareni G, Chatr-aryamontri A, Chautard E, Chen C, Dumousseau M, Goll J, Hancock RE, Hannick LI, Jurisica I, Khadake J, Lynn DJ, Mahadevan U, Perfetto L, Raghunath A, Ricard-Blum S, Roechert B, Salwinski L, Stümpflen V, Tyers M, Uetz P, Xenarios I, Hermjakob H.
Nat Methods,
2012
doi:10.1038/nmeth.1931.
PLoS One,
2012
doi:.
Koh GC, Porras P, Aranda B, Hermjakob H, Orchard SE.
J Proteome Res,
2012
doi:10.1021/pr201211w.
Orchard S, Albar JP, Deutsch EW, Eisenacher M, Binz PA, Martinez-Bartolomé S, Vizcaíno JA, Hermjakob H.
Proteomics,
2012
doi:10.1002/pmic.201290016.
Kerrien S, Aranda B, Breuza L, Bridge A, Broackes-Carter F, Chen C, Duesbury M, Dumousseau M, Feuermann M, Hinz U, Jandrasits C, Jimenez RC, Khadake J, Mahadevan U, Masson P, Pedruzzi I, Pfeiffenberger E, Porras P, Raghunath A, Roechert B, Orchard S, Hermjakob H.
Nucleic Acids Res,
2012
doi:10.1093/nar/gkr1088.
UniProt Consortium.
Nucleic Acids Res,
2012
doi:10.1093/nar/gkr981.
Porras P.
2011
doi:10.6019/tol.inta-qt.2011.00001.1.
Orchard S, Charles PD.
2011
doi:10.6019/tol.pms.2011.00001.1.
Sokolowski B, Orchard S, Harvey M, Sridhar S, Sakai Y.
PLoS One,
2011
doi:10.1371/journal.pone.0028532.
Orchard S, Albar JP, Deutsch EW, Eisenacher M, Vizcaíno JA, Hermjakob H.
Proteomics,
2011
doi:10.1002/pmic.201190117.
Orchard S, Al-Lazikani B, Bryant S, Clark D, Calder E, Dix I, Engkvist O, Forster M, Gaulton A, Gilson M, Glen R, Grigorov M, Hammond-Kosack K, Harland L, Hopkins A, Larminie C, Lynch N, Mann RK, Murray-Rust P, Lo Piparo E, Southan C, Steinbeck C, Wishart D, Hermjakob H, Overington J, Thornton J.
Nat Rev Drug Discov,
2011
doi:10.1038/nrd3503.
Aranda B, Blankenburg H, Kerrien S, Brinkman FS, Ceol A, Chautard E, Dana JM, De Las Rivas J, Dumousseau M, Galeota E, Gaulton A, Goll J, Hancock RE, Isserlin R, Jimenez RC, Kerssemakers J, Khadake J, Lynn DJ, Michaut M, O'Kelly G, Ono K, Orchard S, Prieto C, Razick S, Rigina O, Salwinski L, Simonovic M, Velankar S, Winter A, Wu G, Bader GD, Cesareni G, Donaldson IM, Eisenberg D, Kleywegt GJ, Overington J, Ricard-Blum S, Tyers M, Albrecht M, Hermjakob H.
Nat Methods,
2011
doi:10.1038/nmeth.1637.
Magrane M, UniProt Consortium.
Database (Oxford),
2011
doi:10.1093/database/bar009.
Schneider MV, Orchard S.
Methods Mol Biol,
2011
doi:10.1007/978-1-61779-027-0_1.
Gaudet P, Bairoch A, Field D, Sansone SA, Taylor C, Attwood TK, Bateman A, Blake JA, Bult CJ, Cherry JM, Chisholm RL, Cochrane G, Cook CE, Eppig JT, Galperin MY, Gentleman R, Goble CA, Gojobori T, Hancock JM, Howe DG, Imanishi T, Kelso J, Landsman D, Lewis SE, Karsch Mizrachi I, Orchard S, Ouellette BF, Ranganathan S, Richardson L, Rocca-Serra P, Schofield PN, Smedley D, Southan C, Tan TW, Tatusova T, Whetzel PL, White O, Yamasaki C, BioDBCore Working Group.
Database (Oxford),
2011
doi:10.1093/database/baq027.
Ning M, Sarracino DA, Kho AT, Guo S, Lee SR, Krastins B, Buonanno FS, Vizcaíno JA, Orchard S, McMullin D, Wang X, Lo EH.
Stroke,
2011
doi:10.1161/strokeaha.110.585703.
Gaudet P, Bairoch A, Field D, Sansone SA, Taylor C, Attwood TK, Bateman A, Blake JA, Bult CJ, Cherry JM, Chisholm RL, Cochrane G, Cook CE, Eppig JT, Galperin MY, Gentleman R, Goble CA, Gojobori T, Hancock JM, Howe DG, Imanishi T, Kelso J, Landsman D, Lewis SE, Mizrachi IK, Orchard S, Ouellette BF, Ranganathan S, Richardson L, Rocca-Serra P, Schofield PN, Smedley D, Southan C, Tan TW, Tatusova T, Whetzel PL, White O, Yamasaki C, BioDBCore Working Group.
Nucleic Acids Res,
2011
doi:10.1093/nar/gkq1173.
Orchard S, Hermjakob H.
Methods Mol Biol,
2011
doi:10.1007/978-1-60761-977-2_15.
Orchard S, Hermjakob H.
Methods Mol Biol,
2011
doi:10.1007/978-1-60761-987-1_9.
UniProt Consortium.
Nucleic Acids Res,
2011
doi:10.1093/nar/gkq1020.
Kettner C, Field D, Sansone SA, Taylor C, Aerts J, Binns N, Blake A, Britten CM, de Marco A, Fostel J, Gaudet P, González-Beltrán A, Hardy N, Hellemans J, Hermjakob H, Juty N, Leebens-Mack J, Maguire E, Neumann S, Orchard S, Parkinson H, Piel W, Ranganathan S, Rocca-Serra P, Santarsiero A, Shotton D, Sterk P, Untergasser A, Whetzel PL.
Stand Genomic Sci,
2010
doi:10.4056/sigs.147362.
Field D, Sansone S, Delong EF, Sterk P, Friedberg I, Gaudet P, Lewis S, Kottmann R, Hirschman L, Garrity G, Cochrane G, Wooley J, Meyer F, Hunter S, White O, Bramlett B, Gregurick S, Lapp H, Orchard S, Rocca-Serra P, Ruttenberg A, Shah N, Taylor C, Thessen A.
Stand Genomic Sci,
2010
doi:10.4056/sigs/1403501.
Orchard S, Jones A, Albar JP, Cho SY, Kwon KH, Lee C, Hermjakob H.
Proteomics,
2010
doi:10.1002/pmic.201090075.
Orchard S, Albar JP, Deutsch EW, Eisenacher M, Binz PA, Hermjakob H.
Proteomics,
2010
doi:10.1002/pmic.201090034.
Bourbeillon J, Orchard S, Benhar I, Borrebaeck C, de Daruvar A, Dübel S, Frank R, Gibson F, Gloriam D, Haslam N, Hiltker T, Humphrey-Smith I, Hust M, Juncker D, Koegl M, Konthur Z, Korn B, Krobitsch S, Muyldermans S, Nygren PA, Palcy S, Polic B, Rodriguez H, Sawyer A, Schlapshy M, Snyder M, Stoevesandt O, Taussig MJ, Templin M, Uhlen M, van der Maarel S, Wingren C, Hermjakob H, Sherman D.
Nat Biotechnol,
2010
doi:10.1038/nbt0710-650.
Orchard S, Aranda B, Hermjakob H.
Curr Protoc Protein Sci,
2010
doi:10.1002/0471140864.ps2503s60.
Perreau VM, Orchard S, Adlard PA, Bellingham SA, Cappai R, Ciccotosto GD, Cowie TF, Crouch PJ, Duce JA, Evin G, Faux NG, Hill AF, Hung YH, James SA, Li QX, Mok SS, Tew DJ, White AR, Bush AI, Hermjakob H, Masters CL.
Proteomics,
2010
doi:10.1002/pmic.200900773.
Hinz U, UniProt Consortium.
Cell Mol Life Sci,
2010
doi:10.1007/s00018-009-0229-6.
Orchard S, Kerrien S.
Methods Mol Biol,
2010
doi:10.1007/978-1-60761-444-9_21.
Aranda B, Achuthan P, Alam-Faruque Y, Armean I, Bridge A, Derow C, Feuermann M, Ghanbarian AT, Kerrien S, Khadake J, Kerssemakers J, Leroy C, Menden M, Michaut M, Montecchi-Palazzi L, Neuhauser SN, Orchard S, Perreau V, Roechert B, van Eijk K, Hermjakob H.
Nucleic Acids Res,
2010
doi:10.1093/nar/gkp878.
UniProt Consortium.
Nucleic Acids Res,
2010
doi:10.1093/nar/gkp846.
Gloriam DE, Orchard S, Bertinetti D, Björling E, Bongcam-Rudloff E, Borrebaeck CA, Bourbeillon J, Bradbury AR, de Daruvar A, Dübel S, Frank R, Gibson TJ, Gold L, Haslam N, Herberg FW, Hiltke T, Hoheisel JD, Kerrien S, Koegl M, Konthur Z, Korn B, Landegren U, Montecchi-Palazzi L, Palcy S, Rodriguez H, Schweinsberg S, Sievert V, Stoevesandt O, Taussig MJ, Ueffing M, Uhlén M, van der Maarel S, Wingren C, Woollard P, Sherman DJ, Hermjakob H.
Mol Cell Proteomics,
2010
doi:10.1074/mcp.m900185-mcp200.
Orchard S, Deutsch EW, Binz PA, Jones AR, Creasy D, Montechi-Palazzi L, Corthals G, Hermjakob H.
Proteomics,
2009
doi:10.1002/pmic.200900407.
Orchard S, Binz PA, Hermjakob H.
Proteomics,
2009
doi:10.1002/pmic.200900406.
Orchard S.
J Proteome Res,
2009
doi:10.1021/pr900527r.
Kathiresan T, Harvey M, Orchard S, Sakai Y, Sokolowski B.
Mol Cell Proteomics,
2009
doi:10.1074/mcp.m800495-mcp200.
Mehta A, Orchard S.
Mol Cell Biochem,
2009
doi:10.1007/s11010-009-0114-5.
Orchard S, Ping P.
Proteomics,
2009
doi:10.1002/pmic.200800839.
Orchard S, Taylor CF.
N Biotechnol,
2009
doi:10.1016/j.nbt.2008.12.001.
Orchard S, Hoogland C, Bairoch A, Eisenacher M, Kraus HJ, Binz PA.
Proteomics,
2009
doi:10.1002/pmic.200800838.
Persson B, Kallberg Y, Bray JE, Bruford E, Dellaporta SL, Favia AD, Duarte RG, Jörnvall H, Kavanagh KL, Kedishvili N, Kisiela M, Maser E, Mindnich R, Orchard S, Penning TM, Thornton JM, Adamski J, Oppermann U.
Chem Biol Interact,
2009
doi:10.1016/j.cbi.2008.10.040.
UniProt Consortium.
Nucleic Acids Res,
2009
doi:10.1093/nar/gkn664.
Reeves GA, Eilbeck K, Magrane M, O'Donovan C, Montecchi-Palazzi L, Harris MA, Orchard S, Jimenez RC, Prlic A, Hubbard TJ, Hermjakob H, Thornton JM.
Bioinformatics,
2008
doi:10.1093/bioinformatics/btn528.
Chatr-aryamontri A, Kerrien S, Khadake J, Orchard S, Ceol A, Licata L, Castagnoli L, Costa S, Derow C, Huntley R, Aranda B, Leroy C, Thorneycroft D, Apweiler R, Cesareni G, Hermjakob H.
Genome Biol,
2008
doi:10.1186/gb-2008-9-s2-s5.
Jones AR, Orchard S.
Mol Cell Proteomics,
2008
doi:10.1074/mcp.h800010-mcp200.
Orchard S, Albar JP, Deutsch EW, Binz PA, Jones AR, Creasy D, Hermjakob H.
Proteomics,
2008
doi:10.1002/pmic.200800555.
Taylor CF, Field D, Sansone SA, Aerts J, Apweiler R, Ashburner M, Ball CA, Binz PA, Bogue M, Booth T, Brazma A, Brinkman RR, Michael Clark A, Deutsch EW, Fiehn O, Fostel J, Ghazal P, Gibson F, Gray T, Grimes G, Hancock JM, Hardy NW, Hermjakob H, Julian RK, Kane M, Kettner C, Kinsinger C, Kolker E, Kuiper M, Le Novère N, Leebens-Mack J, Lewis SE, Lord P, Mallon AM, Marthandan N, Masuya H, McNally R, Mehrle A, Morrison N, Orchard S, Quackenbush J, Reecy JM, Robertson DG, Rocca-Serra P, Rodriguez H, Rosenfelder H, Santoyo-Lopez J, Scheuermann RH, Schober D, Smith B, Snape J, Stoeckert CJ, Tipton K, Sterk P, Untergasser A, Vandesompele J, Wiemann S.
Nat Biotechnol,
2008
doi:10.1038/nbt.1411.
Braconi Quintaje S, Orchard S.
Mol Cell Proteomics,
2008
doi:10.1074/mcp.r700001-mcp200.
Morsy M, Gouthu S, Orchard S, Thorneycroft D, Harper JF, Mittler R, Cushman JC.
Trends Plant Sci,
2008
doi:10.1016/j.tplants.2008.01.006.
Orchard S, Martens L, Tasman J, Binz PA, Albar JP, Hermjakob H.
Proteomics,
2008
doi:10.1002/pmic.200701086.
Orchard S, Hermjakob H.
Brief Bioinform,
2008
doi:10.1093/bib/bbm061.
Chiang T, Li N, Orchard S, Kerrien S, Hermjakob H, Gentleman R, Huber W.
Bioinformatics,
2008
doi:10.1093/bioinformatics/btm518.
Martens L, Orchard S, Apweiler R, Hermjakob H.
Mol Cell Proteomics ,
2007
doi:.
Orchard S.
Expert Rev Proteomics,
2007
doi:10.1586/14789450.4.6.709.
Kerrien S, Orchard S, Montecchi-Palazzi L, Aranda B, Quinn AF, Vinod N, Bader GD, Xenarios I, Wojcik J, Sherman D, Tyers M, Salama JJ, Moore S, Ceol A, Chatr-Aryamontri A, Oesterheld M, Stümpflen V, Salwinski L, Nerothin J, Cerami E, Cusick ME, Vidal M, Gilson M, Armstrong J, Woollard P, Hogue C, Eisenberg D, Cesareni G, Apweiler R, Hermjakob H.
BMC Biol,
2007
doi:10.1186/1741-7007-5-44.
Orchard S, Montechi-Palazzi L, Deutsch EW, Binz PA, Jones AR, Paton N, Pizarro A, Creasy DM, Wojcik J, Hermjakob H.
Proteomics,
2007
doi:10.1002/pmic.200700658.
Orchard S, Kerrien S, Jones P, Ceol A, Chatr-Aryamontri A, Salwinski L, Nerothin J, Hermjakob H.
Proteomics,
2007
doi:10.1002/pmic.200700286.
Martens L, Orchard S, Apweiler R, Hermjakob H.
Mol Cell Proteomics,
2007
doi:10.1016/s1535-9476(20)31973-3.
Orchard S, Salwinski L, Kerrien S, Montecchi-Palazzi L, Oesterheld M, Stümpflen V, Ceol A, Chatr-aryamontri A, Armstrong J, Woollard P, Salama JJ, Moore S, Wojcik J, Bader GD, Vidal M, Cusick ME, Gerstein M, Gavin AC, Superti-Furga G, Greenblatt J, Bader J, Uetz P, Tyers M, Legrain P, Fields S, Mulder N, Gilson M, Niepmann M, Burgoon L, De Las Rivas J, Prieto C, Perreau VM, Hogue C, Mewes HW, Apweiler R, Xenarios I, Eisenberg D, Cesareni G, Hermjakob H.
Nat Biotechnol,
2007
doi:10.1038/nbt1324.
Tress ML, Martelli PL, Frankish A, Reeves GA, Wesselink JJ, Yeats C, Olason PI, Albrecht M, Hegyi H, Giorgetti A, Raimondo D, Lagarde J, Laskowski RA, López G, Sadowski MI, Watson JD, Fariselli P, Rossi I, Nagy A, Kai W, Størling Z, Orsini M, Assenov Y, Blankenburg H, Huthmacher C, Ramírez F, Schlicker A, Denoeud F, Jones P, Kerrien S, Orchard S, Antonarakis SE, Reymond A, Birney E, Brunak S, Casadio R, Guigo R, Harrow J, Hermjakob H, Jones DT, Lengauer T, Orengo CA, Patthy L, Thornton JM, Tramontano A, Valencia A.
Proc Natl Acad Sci U S A,
2007
doi:10.1073/pnas.0700800104.
Orchard S, Heck A, Uhlen M, Ping P.
Proteomics,
2007
doi:10.1002/pmic.200700015.
Orchard S, Jones AR, Stephan C, Binz PA.
Proteomics,
2007
doi:10.1002/pmic.200700014.
Orchard S, Taylor CF, Jones P, Montechi-Palazzo L, Binz PA, Jones AR, Pizarro A, Julian RK, Hermjakob H.
Proteomics,
2007
doi:10.1002/pmic.200600915.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Buillard V, Cerutti L, Copley R, Courcelle E, Das U, Daugherty L, Dibley M, Finn R, Fleischmann W, Gough J, Haft D, Hulo N, Hunter S, Kahn D, Kanapin A, Kejariwal A, Labarga A, Langendijk-Genevaux PS, Lonsdale D, Lopez R, Letunic I, Madera M, Maslen J, McAnulla C, McDowall J, Mistry J, Mitchell A, Nikolskaya AN, Orchard S, Orengo C, Petryszak R, Selengut JD, Sigrist CJ, Thomas PD, Valentin F, Wilson D, Wu CH, Yeats C.
Nucleic Acids Res,
2007
doi:10.1093/nar/gkl841.
Orchard S, Jones P, Taylor C, Zhu W, Julian RK, Hermjakob H, Apweiler R.
Methods Mol Biol,
2007
doi:10.1385/1-59745-275-0:261.
Kerrien S, Alam-Faruque Y, Aranda B, Bancarz I, Bridge A, Derow C, Dimmer E, Feuermann M, Friedrichsen A, Huntley R, Kohler C, Khadake J, Leroy C, Liban A, Lieftink C, Montecchi-Palazzi L, Orchard S, Risse J, Robbe K, Roechert B, Thorneycroft D, Zhang Y, Apweiler R, Hermjakob H.
Nucleic Acids Res,
2007
doi:10.1093/nar/gkl958.
Orchard S, Hermjakob H.
2006
doi:.
Orchard S, Hermjakob H, Pruess M, Apweiler R.
2006
doi:10.1002/3527608230.ch2.
Orchard S, Apweiler R, Barkovich R, Field D, Garavelli JS, Horn D, Jones A, Jones P, Julian R, McNally R, Nerothin J, Paton N, Pizarro A, Seymour S, Taylor C, Wiemann S, Hermjakob H.
Proteomics,
2006
doi:10.1002/pmic.200600452.
Orchard S, Ping P.
Proteomics,
2006
doi:10.1002/pmic.200600453.
Orchard S, Hermjakob H, Taylor C, Binz PA, Hoogland C, Julian R, Garavelli JS, Aebersold R, Apweiler R.
Proteomics,
2006
doi:10.1002/pmic.200500868.
Taylor C, Hermjakob H, Apweiler R, Orchard S, Zhu W.
2005
doi:.
Orchard S, Hermjakob H, Taylor C, Aebersold R, Apweiler R.
Proteomics,
2005
doi:10.1002/pmic.200500727.
Orchard S, Hermjakob H, Taylor CF, Potthast F, Jones P, Zhu W, Julian RK, Apweiler R.
Proteomics,
2005
doi:10.1002/pmic.200500626.
Orchard S, Hermjakob H, Taylor CF, Potthast F, Jones P, Zhu W, Julian RK, Apweiler R.
Expert Rev Proteomics,
2005
doi:10.1586/14789450.2.3.287.
Orchard S, Hermjakob H, Apweiler R.
Mol Cell Proteomics,
2005
doi:10.1074/mcp.r500003-mcp200.
Orchard S, Montecchi-Palazzi L, Hermjakob H, Apweiler R.
Pac Symp Biocomput,
2005
doi:.
Orchard S, Hermjakob H, Binz PA, Hoogland C, Taylor CF, Zhu W, Julian RK, Apweiler R.
Proteomics,
2005
doi:10.1002/pmic.200401158.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bradley P, Bork P, Bucher P, Cerutti L, Copley R, Courcelle E, Das U, Durbin R, Fleischmann W, Gough J, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lonsdale D, Lopez R, Letunic I, Madera M, Maslen J, McDowall J, Mitchell A, Nikolskaya AN, Orchard S, Pagni M, Ponting CP, Quevillon E, Selengut J, Sigrist CJ, Silventoinen V, Studholme DJ, Vaughan R, Wu CH.
Nucleic Acids Res,
2005
doi:10.1093/nar/gki106.
Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bradley P, Bordoli L, Bucher P, Courcelle E, Das U, Durbin R, Flegel V, Fleischmann W, Gouzy J, Griffiths-Jones, S, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lonsdale D, Lopez R, McDowall J, Mulder N, Nikolskaya AN, Orchard S, Peyruc D, Quevillon E, Servant F, Sigrist CJ, Silventoinen V, Studholme DJ, Wu CH.
2004
doi:.
Orchard S, Hermjakob H, Apweiler R.
Drug Discov Today Biosilico,
2004
doi:10.1016/s1741-8364(04)02405-9.
Orchard S, Taylor C, Hermjakob H, Zhu W, Julian R, Apweiler R.
Expert Rev Proteomics,
2004
doi:10.1586/14789450.1.2.179.
Orchard S, Taylor CF, Hermjakob H, Weimin-Zhu, Julian RK, Apweiler R.
Proteomics,
2004
doi:10.1002/pmic.200400884.
Hermjakob H, Montecchi-Palazzi L, Lewington C, Mudali S, Kerrien S, Orchard S, Vingron M, Roechert B, Roepstorff P, Valencia A, Margalit H, Armstrong J, Bairoch A, Cesareni G, Sherman D, Apweiler R.
Nucleic Acids Res,
2004
doi:10.1093/nar/gkh052.
Orchard S, Hermjakob H, Julian RK, Runte K, Sherman D, Wojcik J, Zhu W, Apweiler R.
Proteomics,
2004
doi:10.1002/pmic.200300694.
Hermjakob H, Montecchi-Palazzi L, Bader G, Wojcik J, Salwinski L, Ceol A, Moore S, Orchard S, Sarkans U, von Mering C, Roechert B, Poux S, Jung E, Mersch H, Kersey P, Lappe M, Li Y, Zeng R, Rana D, Nikolski M, Husi H, Brun C, Shanker K, Grant SG, Sander C, Bork P, Zhu W, Pandey A, Brazma A, Jacq B, Vidal M, Sherman D, Legrain P, Cesareni G, Xenarios I, Eisenberg D, Steipe B, Hogue C, Apweiler R.
Nat Biotechnol,
2004
doi:10.1038/nbt926.
Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bradley P, Bordoli L, Bucher P, Courcelle E, Das U, Durbin R, Flegel V, Fleischmann W, Griffiths-Jones S, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lonsdale D, Lopez R, Maslen J, McDowall J, Mulder N, Nikolskaya AN, Orchard S, Quevillon E, Servant F, Sigrist CJA, Silventoinen V, Studholme DJ, Wu CH.
2003
doi:.
Orchard S, Kersey P, Zhu W, Montecchi-Palazzi L, Hermjakob H, Apweiler R.
Comp Funct Genomics,
2003
doi:10.1002/cfg.279.
Orchard S, Kersey P, Hermjakob H, Apweiler R.
Comp Funct Genomics,
2003
doi:10.1002/cfg.232.
Orchard S, Zhu W, Julian RK, Hermjakob H, Apweiler R.
Proteomics,
2003
doi:10.1002/pmic.200300588.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Barrell D, Bateman A, Binns D, Biswas M, Bradley P, Bork P, Bucher P, Copley RR, Courcelle E, Das U, Durbin R, Falquet L, Fleischmann W, Griffiths-Jones S, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lopez R, Letunic I, Lonsdale D, Silventoinen V, Orchard SE, Pagni M, Peyruc D, Ponting CP, Selengut JD, Servant F, Sigrist CJ, Vaughan R, Zdobnov EM.
Nucleic Acids Res,
2003
doi:10.1093/nar/gkg046.
Orchard S, Hermjakob H, Apweiler R.
Proteomics,
2003
doi:10.1002/pmic.200300496.
Orchard S.
Curr Opin Drug Discov Devel,
2002
doi:.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Biswas M, Bradley P, Bork P, Bucher P, Copley R, Courcelle E, Durbin R, Falquet L, Fleischmann W, Gouzy J, Griffith-Jones S, Haft D, Hermjakob H, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lopez R, Letunic I, Orchard S, Pagni M, Peyruc D, Ponting CP, Servant F, Sigrist CJ, InterPro Consortium.
Brief Bioinform,
2002
doi:10.1093/bib/3.3.225.
Wilkinson SE, Nixon JS.
Cell Mol Life Sci,
1998
doi:10.1007/s000180050241.
Williams DH, Wilkinson SE, Purton T, Lamont A, Flotow H, Murray EJ.
Biochemistry,
1998
doi:10.1021/bi972914c.
Flotow H, Purton TJ, Whitaker DP, Williams DH, Wilkinson SE.
Inflamm Res,
1996
doi:10.1007/bf02252937.
Bubeck Wardenburg J, Fu C, Jackman JK, Flotow H, Wilkinson SE, Williams DH, Johnson R, Kong G, Chan AC, Findell PR.
J Biol Chem,
1996
doi:10.1074/jbc.271.33.19641.
Wilkinson SE, Hallam TJ.
Methods Mol Biol,
1995
doi:10.1385/0-89603-298-1:261.
Wilkinson SE, Hallam TJ.
Trends Pharmacol Sci,
1994
doi:10.1016/0165-6147(94)90110-4.
Wilkinson SE, Parker PJ, Nixon JS.
Biochem J,
1993
doi:10.1042/bj2940335.
Bradshaw D, Hill CH, Nixon JS, Wilkinson SE.
Agents Actions,
1993
doi:10.1007/bf02027225.
Wilkinson SE, Wadsworth J.
Agents Actions,
1992
doi:10.1007/bf01997501.
Davis PD, Elliott LH, Harris W, Hill CH, Hurst SA, Keech E, Kumar MK, Lawton G, Nixon JS, Wilkinson SE.
J Med Chem,
1992
doi:10.1021/jm00084a004.
Davis PD, Hill CH, Lawton G, Nixon JS, Wilkinson SE, Hurst SA, Keech E, Turner SE.
J Med Chem,
1992
doi:10.1021/jm00079a024.
Nixon JS, Wilkinson SE, Davis PD, Sedgwick AD, Wadsworth J, Westmacott D.
Agents Actions,
1991
doi:10.1007/bf01980872.
Nixon JS, Bottomley KM, Broadhurst MJ, Brown PA, Johnson WH, Lawton G, Marley J, Sedgwick AD, Wilkinson SE.
Int J Tissue React,
1991
doi:.
Muid RE, Dale MM, Davis PD, Elliott LH, Hill CH, Kumar H, Lawton G, Twomey BM, Wadsworth J, Wilkinson SE.
FEBS Lett,
1991
doi:10.1016/0014-5793(91)81178-b.
Twomey B, Muid RE, Nixon JS, Sedgwick AD, Wilkinson SE, Dale MM.
Biochem Biophys Res Commun,
1990
doi:10.1016/0006-291x(90)90795-o.
Elliott LH, Wilkinson SE, Sedgwick AD, Hill CH, Lawton G, Davis PD, Nixon JS.
Biochem Biophys Res Commun,
1990
doi:10.1016/0006-291x(90)91369-4.
Davis PD, Hill CH, Keech E, Lawton G, Nixon JS, Sedgwick AD, Wadsworth J, Westmacott D, Wilkinson SE.
FEBS Lett,
1989
doi:10.1016/0014-5793(89)81494-2.
Nixon JS, Wilkinson SE, Davis P, Bloxham DP.
Agents Actions,
1986
doi:10.1007/bf01982626.