{"id":30937,"date":"2025-02-03T12:51:56","date_gmt":"2025-02-03T12:51:56","guid":{"rendered":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/?page_id=30937"},"modified":"2025-02-24T09:15:51","modified_gmt":"2025-02-24T09:15:51","slug":"infrastructure","status":"publish","type":"page","link":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/infrastructure\/","title":{"rendered":"Infrastructure"},"content":{"rendered":"\n<div class=\"vf-grid | vf-grid__col-3\"><div class=\"vf-grid__col--span-2\"><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<p><strong>The Data Science Internal Support maintains and provides a variety of tools and resources to support data science and computational biology work.<\/strong><\/p>\n\n\n\n<p>Our goal is to ensure that researchers have the necessary infrastructure to collaborate efficiently and perform cutting-edge scientific research. Below, you&#8217;ll find the key resources available to you:<\/p>\n\n<\/div>\n<\/div>\n\n\n<div><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<h2 class=\"wp-block-heading\">Contact<\/h2>\n\n\n<div class=\"vf-content-hub-html\" data-cache=\"f7551150\">\n      <!-- Generated by: http:\/\/content.embl.org\/api\/v1\/pattern.html?filter-content-type=person&amp;filter-field-contains%5Bfield_person_full_name%5D=renato%20alves&amp;filter-fields-empty=field_person_visible_internally&amp;filter-ref-entity%5Bfield_person_positions%5D%5Btitle%5D=&amp;filter-ref-entity%5Bfield_person_positions%5D%5Bfield_position_primary%5D=1&amp;hide%5Bteam%2Cemail%2Cphones%2Cmobile%2Corcid%5D=1&amp;limit=1&amp;pattern=vf-profile-inline -->\n                \n                            <article class=\"vf-profile vf-profile--very-easy vf-profile--medium vf-profile--inline\" data-embl-js-conditional-edit=\"81602\">\n              <img decoding=\"async\" class=\"vf-profile__image\" src=\"https:\/\/content.embl.org\/\/sites\/default\/files\/styles\/medium\/public\/persons\/CP-60022244.jpg?itok=goRi_n6M\" alt=\"image of Renato Alves\" \/>\n      \n              <h3 class=\"vf-profile__title\">\n                      <a href=\"https:\/\/www.embl.org\/people\/person\/renato-alves\" class=\"vf-profile__link\">Renato Alves<\/a>\n                  <\/h3>\n      \n              <p class=\"vf-profile__job-title\">\n          Senior Bioinformatics Community Manager\n        <\/p>\n      \n      \n      \n      \n      \n      \n            <a class=\"vf-text vf-text--body-r vf-link embl-conditional-edit\" rel=\"noopener noreferrer nofollow\" href=\"\/node\/81602\/81602\" target=\"_blank\">\n        Edit\n      <\/a>\n    <\/article>\n  <\/div>\n\n<\/div>\n<\/div>\n<\/div>\n\n\n<style>\n    <\/style>\n\n<section id=\"wp-block-1\">\n  <div class=\"vf-card-container vf-card-container__col-4 | vf-u-fullbleed  \n  | vf-u-background-color-ui--white \">\n        <div class=\"vf-card-container__inner\">\n            <div class=\"vf-section-header | vf-u-margin__bottom--600 | vf-u-sr-only\">\n        <h2 class=\"vf-section-header__heading\" >\n             <\/h2>\n              <\/div>\n      \n\n<article class=\"vf-card vf-card--brand vf-card--bordered vf-u-margin__bottom--800\" default>\n  <div class=\"vf-card__content | vf-stack vf-stack--400\">\n      <h3 class=\"vf-card__heading\">\n              <a class=\"vf-card__link\" href=\"https:\/\/bio-it.embl.de\/computing-resources\/\">\n      Computing Resources at EMBL       <svg aria-hidden=\"true\" class=\"vf-card__heading__icon | vf-icon vf-icon-arrow--inline-end\" width=\"1em\" height=\"1em\" xmlns=\"http:\/\/www.w3.org\/2000\/svg\">\n          <path d=\"M0 12c0 6.627 5.373 12 12 12s12-5.373 12-12S18.627 0 12 0C5.376.008.008 5.376 0 12zm13.707-5.209l4.5 4.5a1 1 0 010 1.414l-4.5 4.5a1 1 0 01-1.414-1.414l2.366-2.367a.25.25 0 00-.177-.424H6a1 1 0 010-2h8.482a.25.25 0 00.177-.427l-2.366-2.368a1 1 0 011.414-1.414z\" fill=\"currentColor\" fill-rule=\"nonzero\"><\/path>\n       <\/svg>\n        <\/a>\n          <\/h3>\n                <p class=\"vf-card__text\"><span style=\"font-weight: 400;\">Access information on the computing resources available at EMBL.<\/span><\/p>\n      <\/div>\n<\/article>\n\n\n\n\n<article class=\"vf-card vf-card--brand vf-card--bordered vf-u-margin__bottom--800\" default>\n  <div class=\"vf-card__content | vf-stack vf-stack--400\">\n      <h3 class=\"vf-card__heading\">\n              <a class=\"vf-card__link\" href=\"https:\/\/wiki.embl.de\/cluster\/Main_Page\">\n      Cluster Wiki       <svg aria-hidden=\"true\" class=\"vf-card__heading__icon | vf-icon vf-icon-arrow--inline-end\" width=\"1em\" height=\"1em\" xmlns=\"http:\/\/www.w3.org\/2000\/svg\">\n          <path d=\"M0 12c0 6.627 5.373 12 12 12s12-5.373 12-12S18.627 0 12 0C5.376.008.008 5.376 0 12zm13.707-5.209l4.5 4.5a1 1 0 010 1.414l-4.5 4.5a1 1 0 01-1.414-1.414l2.366-2.367a.25.25 0 00-.177-.424H6a1 1 0 010-2h8.482a.25.25 0 00.177-.427l-2.366-2.368a1 1 0 011.414-1.414z\" fill=\"currentColor\" fill-rule=\"nonzero\"><\/path>\n       <\/svg>\n        <\/a>\n          <\/h3>\n                <p class=\"vf-card__text\"><span style=\"font-weight: 400;\">Explore information on the computing cluster at EMBL and instructions for usage.<\/span><\/p>\n      <\/div>\n<\/article>\n\n\n\n\n<article class=\"vf-card vf-card--brand vf-card--bordered vf-u-margin__bottom--800\" default>\n  <div class=\"vf-card__content | vf-stack vf-stack--400\">\n      <h3 class=\"vf-card__heading\">\n              <a class=\"vf-card__link\" href=\"https:\/\/www.embl.org\/internal-information\/it-services\/#vf-tabs__section-heidelberg\">\n      IT Services Information       <svg aria-hidden=\"true\" class=\"vf-card__heading__icon | vf-icon vf-icon-arrow--inline-end\" width=\"1em\" height=\"1em\" xmlns=\"http:\/\/www.w3.org\/2000\/svg\">\n          <path d=\"M0 12c0 6.627 5.373 12 12 12s12-5.373 12-12S18.627 0 12 0C5.376.008.008 5.376 0 12zm13.707-5.209l4.5 4.5a1 1 0 010 1.414l-4.5 4.5a1 1 0 01-1.414-1.414l2.366-2.367a.25.25 0 00-.177-.424H6a1 1 0 010-2h8.482a.25.25 0 00.177-.427l-2.366-2.368a1 1 0 011.414-1.414z\" fill=\"currentColor\" fill-rule=\"nonzero\"><\/path>\n       <\/svg>\n        <\/a>\n          <\/h3>\n                <p class=\"vf-card__text\"><span style=\"font-weight: 400;\">Find out about IT Services at EMBL.<\/span><\/p>\n      <\/div>\n<\/article>\n\n\n\n          <\/div>\n      <\/div>\n<\/section>\n\n<style>\n    <\/style>\n\n<section id=\"wp-block-1\">\n  <div class=\"vf-card-container  | vf-u-fullbleed  \n  | vf-u-background-color-ui--grey--light \">\n          <div class=\"vf-section-header | vf-u-margin__bottom--600 | vf-u-sr-only\">\n        <h2 class=\"vf-section-header__heading\" >\n         Newcomers Guide    <\/h2>\n              <\/div>\n      \n\n<div class=\"vf-grid | vf-grid__col-3\"><div class=\"vf-grid__col--span-2\"><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<h2 class=\"wp-block-heading\"><strong>Newcomers Guide<\/strong><\/h2>\n\n\n\n<p>Discover guidance for newcomers to EMBL&#8217;s computational biology community<\/p>\n\n\n\n<a href=\"https:\/\/bio-it.embl.de\/newcomer-guide\/\" target=\"_blank\">\n<button class=\"vf-button vf-button--primary vf-button--sm\">Browse the Guide<\/button>\n<\/a>\n<!--\/vf-button-->\n\n\n<\/div>\n<\/div>\n\n\n<div><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<figure class=\"vf-figure wp-block-image size-large\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"683\" class=\"vf-figure__image\" src=\"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-content\/uploads\/2025\/02\/BioNT-Community-Event-CarpentryConnect_11-1024x683.jpg\" alt=\"\" class=\"wp-image-34189\" srcset=\"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-content\/uploads\/2025\/02\/BioNT-Community-Event-CarpentryConnect_11-1024x683.jpg 1024w, https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-content\/uploads\/2025\/02\/BioNT-Community-Event-CarpentryConnect_11-300x200.jpg 300w, https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-content\/uploads\/2025\/02\/BioNT-Community-Event-CarpentryConnect_11-768x512.jpg 768w, https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-content\/uploads\/2025\/02\/BioNT-Community-Event-CarpentryConnect_11-1536x1025.jpg 1536w, https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-content\/uploads\/2025\/02\/BioNT-Community-Event-CarpentryConnect_11-2048x1366.jpg 2048w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><\/figure>\n\n<\/div>\n<\/div>\n<\/div>\n\n\n        <\/div>\n<\/section>\n\n\n<div class=\"vf-grid | vf-grid__col-3\"><div class=\"vf-grid__col--span-2\"><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<h2 class=\"wp-block-heading\"><strong>Further resources<\/strong><\/h2>\n\n<\/div>\n<\/div>\n\n\n<div><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<\/div>\n<\/div>\n<\/div>\n\n\n\n<div class=\"vf-grid | vf-grid__col-3\"><div><!--[vf\/content]-->\n<div class=\"vf-content\">\n<div class=\"vf-links\">\n    <ul class=\"vf-links__list vf-list\">\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/chat.embl.org\/\">\n        chat.embl.org      <\/a>\n      <\/li>\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/pad.bio-it.embl.de\/\">\n        pad.bio-it.embl.de      <\/a>\n      <\/li>\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/bio-it.embl.de\/gitlab-pages\">\n        GitLab Pages      <\/a>\n      <\/li>\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/git.embl.de\/\">\n        git.embl.de      <\/a>\n      <\/li>\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/rstudio.embl.de\/\">\n        rstudio.embl.de      <\/a>\n      <\/li>\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/jupyterhub.embl.de\/\">\n        jupyterhub.embl.de      <\/a>\n      <\/li>\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/galaxy.embl.de\/\">\n        galaxy.embl.de      <\/a>\n      <\/li>\n  <\/ul>\n\n<\/div>\n\n<\/div>\n<\/div>\n\n\n<div><!--[vf\/content]-->\n<div class=\"vf-content\">\n<div class=\"vf-links\">\n    <ul class=\"vf-links__list vf-list\">\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/survey.bio-it.embl.de\/\">\n        survey.bio-it.embl.de      <\/a>\n      <\/li>\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/labid.embl.org\">\n        labid.embl.org      <\/a>\n      <\/li>\n  <\/ul>\n\n<\/div>\n\n\n\n<p>Shiny portal -for&nbsp;<a href=\"https:\/\/cbbcs-01.embl.de\/shinyapps\/login\" target=\"_blank\" rel=\"noreferrer noopener\">internal<\/a>&nbsp;and&nbsp;<a href=\"https:\/\/shiny-portal.embl.de\/\" target=\"_blank\" rel=\"noreferrer noopener\">external<\/a>&nbsp;collaborators<\/p>\n\n\n\n<p><strong>Maintained by EMBL IT<\/strong><\/p>\n\n\n<div class=\"vf-links\">\n    <ul class=\"vf-links__list vf-list\">\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/intranet.embl.de\/it_services\/services\/horizon\/index.html\">\n        3D Cloud      <\/a>\n      <\/li>\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"http:\/\/dma.embl.de\/\">\n        dma.embl.de      <\/a>\n      <\/li>\n    <li class=\"vf-list__item\">\n          <a class=\"vf-list__link\" href=\"https:\/\/projects.embl.de\/\">\n        projects.embl.de      <\/a>\n      <\/li>\n  <\/ul>\n\n<\/div>\n\n<\/div>\n<\/div>\n\n\n<div><!--[vf\/content]-->\n<div class=\"vf-content\">\n\n<\/div>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":11,"featured_media":824,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"template-title-left-aligned.php","meta":{"_acf_changed":false,"footnotes":""},"embl_taxonomy":[],"class_list":["post-30937","page","type-page","status-publish","has-post-thumbnail","hentry"],"acf":[],"embl_taxonomy_terms":[],"_links":{"self":[{"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/pages\/30937","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/users\/11"}],"replies":[{"embeddable":true,"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/comments?post=30937"}],"version-history":[{"count":12,"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/pages\/30937\/revisions"}],"predecessor-version":[{"id":34201,"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/pages\/30937\/revisions\/34201"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/media\/824"}],"wp:attachment":[{"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/media?parent=30937"}],"wp:term":[{"taxonomy":"embl_taxonomy","embeddable":true,"href":"https:\/\/www.embl.org\/about\/info\/data-science-centre\/wp-json\/wp\/v2\/embl_taxonomy?post=30937"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}