{"id":272635,"date":"2026-06-12T15:53:06","date_gmt":"2026-06-12T14:53:06","guid":{"rendered":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/?post_type=vf_event&#038;p=272635"},"modified":"2026-06-12T15:57:37","modified_gmt":"2026-06-12T14:57:37","slug":"pro27-01","status":"publish","type":"vf_event","link":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/events\/pro27-01\/","title":{"rendered":"Analysis and integration of transcriptome and proteome data"},"content":{"rendered":"\n<div class=\"vf-tabs\"><ul class=\"vf-tabs__list\" data-vf-js-tabs=\"true\"><li class=\"vf-tabs__item\"><a class=\"vf-tabs__link\" href=\"#vf-tabs__section-dtc24-01\" data-vf-js-location-nearest-activation-target=\"\">Overview<\/a><\/li><li class=\"vf-tabs__item\"><a class=\"vf-tabs__link\" href=\"#vf-tabs__section-sponsors\" data-vf-js-location-nearest-activation-target=\"\">Sponsors<\/a><\/li><\/ul><div class=\"vf-tabs-content\" data-vf-js-tabs-content=\"true\">\n<section class=\"vf-tabs__section\" id=\"vf-tabs__section-dtc24-01\"><h2 class=\"vf-u-sr-only\">Overview<\/h2>\n<p class=\"has-text-align-left\">Applications for this event are not open yet. If you are interested in receiving more information, please register your interest.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\">Course overview<\/h2>\n\n\n\n<p>This course is a practical and theoretical training in the analysis and integration of next-generation sequencing and proteomics data to study gene and protein expression in biological systems.<\/p>\n\n\n\n<p>Systems biology is an expanding field of research that seeks to understand, at the molecular level, how cells, tissues, and organisms operate within their biological context. Next-generation sequencing and proteomics are among the key technologies driving this field forward and have matured to a point where they are now accessible to researchers across many areas of biology.<\/p>\n\n\n\n<p>Participants will gain theoretical insight into the structure of sequencing and proteomic data and receive training in the annotation, quantification, and statistical analysis of gene and protein expression using various computational tools. The course will also cover the use of Cytoscape to integrate both data types and derive biological insights.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\">What past participants say about the course<\/h2>\n\n\n\n<p>&#8220;<em>This course was my gateway into bioinformatics\u2014a seamless blend of foundational learning and hands-on practice. With expert guidance and access to powerful tools for transcriptome and proteome integration, even beginners come away equipped to navigate the complexity of omics data and apply it meaningfully to their research.<\/em>&#8221; &#8211; Elena Rakovoliou, Biomedical Research Institute (BRI), Greece<\/p>\n\n\n\n<p>&#8220;<em>The analysis and integration of transcriptome and proteome data was a fantastic opportunity where I learned invaluable skills to enhance and better understand my data. Excellent teaching by lecturers and ample networking opportunities with scientific peers from across the world made the experience only more valuable.<\/em>&#8221; &#8211; Thea Mawhinney, Queen&#8217;s University Belfast, UK<\/p>\n<\/section>\n\n\n\n<section class=\"vf-tabs__section\" id=\"vf-tabs__section-sponsors\"><h2>Sponsors<\/h2>\n<p><strong>Sponsorship opportunities<\/strong><\/p>\n\n\n\n<p>We offer a variety of event sponsoring possibilities, with the flexibility to select a set sponsorship package or combine individual sponsorship options to suit your event budget.&nbsp;Discounts are available for companies sponsoring multiple events at EMBL Heidelberg.&nbsp;<a href=\"http:\/\/www.embl.de\/training\/events\/index.php?p_eventType=CON&amp;amp;p_outstation=HD&amp;amp;p_timeRange=FUTURE&amp;amp;submit=Show+Events\">View other conferences<\/a>, or contact&nbsp;<a href=\"mailto:sponsorship@embl.de\">sponsorship@embl.de<\/a>&nbsp;for further information.<\/p>\n\n\n\n<p>If you are interested in becoming a media partner of this event, please visit our&nbsp;<a href=\"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/sponsor-an-event\/#vf-tabs__section-08208670-4ad4-45ca-a4ff-ac6edb6ffd0b\" target=\"_blank\" rel=\"noreferrer noopener\">media partnerships webpage<\/a>.<\/p>\n\n\n\n<div class=\"wp-block-buttons is-layout-flex wp-block-buttons-is-layout-flex\"><p><a href=\"mailto:sponsorship@embl-em.de?subject=%20Request%20a%20Sponsorship%20Brochure&#038;body=Please%20kindly%20send%20me%20the%20sponsorship%20brochure%20for%20(please%20indicate%20the%20event%20your%20are%20interested%20in).\" class=\"vf-button vf-button--primary vf-button--pill\">Request a sponsorship brochure<\/a><\/p><\/div>\n\n\n\n<div class=\"vf-box vf-box--normal vf-box-theme--quaternary | vf-u-margin__bottom--400\">\n      <h3 class=\"vf-box__heading\">\n                Warning                  <\/h3> \n        <p class=\"vf-box__text\">EMBL wishes to warn sponsors of EMBL conferences and courses of fraudulent schemes purporting to offer sponsorship opportunities on behalf of EMBL or affiliated with EMBL officials. One current scam campaign of which we are aware is conducted using the name \u2018Judy Eastman\u2019 (judy@gopcontact.a2hosted.com) and entails approaches to sponsors offering sponsorship opportunities on EMBL\u2019s behalf. Please be kindly advised that all relevant communication regarding sponsorship of EMBL conferences, symposia and courses is handled by EMBL directly and is sent from an official EMBL account. EMBL does not work with any external providers on sponsorship acquisition.<\/p>\n<p class=\"vf-box__text\">Please also note that:<\/p>\n<ul>\n<li><span style=\"font-size: 12pt\">EMBL never provides attendee lists for purchase. Any offers of such are fraudulent.<\/span><\/li>\n<li><span style=\"font-size: 12pt\">EMBL will never call or email you to ask for your credit card details or to request a payment.<\/span><\/li>\n<li><span style=\"font-size: 12pt\">All payments are on invoice.<\/span><\/li>\n<\/ul>\n<p class=\"vf-box__text\">Suspicious communications purportedly from, for or on behalf of EMBL should be reported to EMBL at the following email address sponsoring@embl.de.<\/p>\n<\/div>\n<\/section>\n<\/div><\/div>\n","protected":false},"excerpt":{"rendered":"","protected":false},"parent":0,"menu_order":0,"template":"","embl_taxonomy":[],"class_list":["post-272635","vf_event","type-vf_event","status-publish","hentry"],"acf":[],"embl_taxonomy_terms":[],"vf_event_start_date":{"value":"20270425","formatted":"25 April 2027"},"vf_event_end_date":{"value":"20270430","formatted":"30 April 2027"},"vf_event_submission_opening":{"value":"","formatted":""},"vf_event_submission_closing":{"value":"","formatted":""},"vf_event_registration_opening":{"value":"","formatted":""},"vf_event_registration_closing":{"value":"","formatted":""},"vf_event_summary":{"value":"","formatted":""},"vf_event_additional_info":{"value":"","formatted":""},"vf_event_registration_fee":{"value":"","formatted":""},"vf_event_canceled":{"value":"no","formatted":"no"},"vf_event_venue":{"value":"EMBL Advanced Training Centre","formatted":"EMBL Advanced Training Centre"},"vf_event_unique_identifier":{"value":"","formatted":""},"vf_event_event_type":{"value":"course","formatted":{"value":"course","label":"Course"}},"vf_event_more_information_link":{"value":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/events\/pro27-01","formatted":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/events\/pro27-01"},"vf_event_registration_link":{"value":"","formatted":""},"vf_event_start_time":{"value":"","formatted":""},"vf_event_end_time":{"value":"","formatted":""},"vf_event_location":{"value":["67"],"formatted":["EMBL Heidelberg"]},"vf_event_time_zone":{"value":"europe\/london","formatted":"Europe\/London"},"vf_event_ss_subtype":{"value":null,"formatted":null},"vf_event_embo_subtype":{"value":"","formatted":""},"vf_event_featured":{"value":"0","formatted":false},"vf_event_organisers_listing":{"value":"Vladimir Benes, Raffaele Calogero, Daria Fijalkowska, Jeroen Krijgsveld, Lennard Martens","formatted":"Vladimir Benes, Raffaele Calogero, Daria Fijalkowska, Jeroen Krijgsveld, Lennard Martens"},"vf_event_displayed":{"value":"","formatted":""},"vf_event_subjects_training":{"value":["gbtt","dab","tim"],"formatted":[{"value":"gbtt","label":"Genome Biology, Transcription and Translation"},{"value":"dab","label":"Data Analysis and Bioinformatics"},{"value":"tim","label":"Technology, Imaging and Methods"}]},"vf_event_registration_closing_on-site":{"value":"","formatted":""},"vf_event_registration_link_on-site":{"value":"https:\/\/mailchi.mp\/embl.de\/pro27-01","formatted":"https:\/\/mailchi.mp\/embl.de\/pro27-01"},"vf_event_other_location":{"value":null,"formatted":null},"vf_event_qrcode":{"value":"272671","formatted":{"ID":272671,"id":272671,"title":"PRO27-01 QR","filename":"PRO27-01-QR.jpg","filesize":293114,"url":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO27-01-QR.jpg","link":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/events\/pro27-01\/pro27-01-qr\/","alt":"","author":"105","description":"","caption":"","name":"pro27-01-qr","status":"inherit","uploaded_to":272635,"date":"2026-06-12 14:57:18","modified":"2026-06-12 14:57:18","menu_order":0,"mime_type":"image\/jpeg","type":"image","subtype":"jpeg","icon":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-includes\/images\/media\/default.png","width":2083,"height":2083,"sizes":{"thumbnail":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO27-01-QR-150x150.jpg","thumbnail-width":150,"thumbnail-height":150,"medium":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO27-01-QR-300x300.jpg","medium-width":300,"medium-height":300,"medium_large":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO27-01-QR-768x768.jpg","medium_large-width":768,"medium_large-height":768,"large":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO27-01-QR-1024x1024.jpg","large-width":1024,"large-height":1024,"1536x1536":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO27-01-QR-1536x1536.jpg","1536x1536-width":1536,"1536x1536-height":1536,"2048x2048":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO27-01-QR-2048x2048.jpg","2048x2048-width":2048,"2048x2048-height":2048,"vf-hero":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO27-01-QR.jpg","vf-hero-width":2083,"vf-hero-height":2083}}},"vf_event_custom_overview":{"value":"This course focus on the analysis and integration of next-generation sequencing and proteomics data. As key technologies in systems biology, sequencing and proteomics have become increasingly accessible across many areas of biology, creating a need for expertise in their analysis and interpretation. Participants will learn how to analyse, integrate, and derive biological insights from these data using computational tools and Cytoscape.","formatted":"This course focus on the analysis and integration of next-generation sequencing and proteomics data. As key technologies in systems biology, sequencing and proteomics have become increasingly accessible across many areas of biology, creating a need for expertise in their analysis and interpretation. Participants will learn how to analyse, integrate, and derive biological insights from these data using computational tools and Cytoscape."},"vf_event_hashtag":{"value":"#EMBLDataIntegration","formatted":"#EMBLDataIntegration"},"vf_event_logo":{"value":"","formatted":false},"vf_event_hero":{"value":"272669","formatted":{"ID":272669,"id":272669,"title":"PRO23-01_CCO_Hero_banner_3000x1000px","filename":"PRO23-01_CCO_Hero_banner_3000x1000px-2-scaled.jpg","filesize":272791,"url":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO23-01_CCO_Hero_banner_3000x1000px-2-scaled.jpg","link":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/events\/pro27-01\/pro23-01_cco_hero_banner_3000x1000px-3\/","alt":"","author":"105","description":"","caption":"","name":"pro23-01_cco_hero_banner_3000x1000px-3","status":"inherit","uploaded_to":272635,"date":"2026-06-12 14:50:45","modified":"2026-06-12 14:50:45","menu_order":0,"mime_type":"image\/jpeg","type":"image","subtype":"jpeg","icon":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-includes\/images\/media\/default.png","width":2560,"height":853,"sizes":{"thumbnail":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO23-01_CCO_Hero_banner_3000x1000px-2-150x150.jpg","thumbnail-width":150,"thumbnail-height":150,"medium":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO23-01_CCO_Hero_banner_3000x1000px-2-300x100.jpg","medium-width":300,"medium-height":100,"medium_large":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO23-01_CCO_Hero_banner_3000x1000px-2-768x256.jpg","medium_large-width":768,"medium_large-height":256,"large":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO23-01_CCO_Hero_banner_3000x1000px-2-1024x341.jpg","large-width":1024,"large-height":341,"1536x1536":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO23-01_CCO_Hero_banner_3000x1000px-2-1536x512.jpg","1536x1536-width":1536,"1536x1536-height":512,"2048x2048":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO23-01_CCO_Hero_banner_3000x1000px-2-2048x683.jpg","2048x2048-width":2048,"2048x2048-height":683,"vf-hero":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-content\/uploads\/PRO23-01_CCO_Hero_banner_3000x1000px-2-scaled.jpg","vf-hero-width":2560,"vf-hero-height":853}}},"_links":{"self":[{"href":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-json\/wp\/v2\/vf_events\/272635","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-json\/wp\/v2\/vf_events"}],"about":[{"href":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-json\/wp\/v2\/types\/vf_event"}],"version-history":[{"count":2,"href":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-json\/wp\/v2\/vf_events\/272635\/revisions"}],"predecessor-version":[{"id":272667,"href":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-json\/wp\/v2\/vf_events\/272635\/revisions\/272667"}],"wp:attachment":[{"href":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-json\/wp\/v2\/media?parent=272635"}],"wp:term":[{"taxonomy":"embl_taxonomy","embeddable":true,"href":"https:\/\/www.embl.org\/about\/info\/course-and-conference-office\/wp-json\/wp\/v2\/embl_taxonomy?post=272635"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}